RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 PIGKQ92643 395 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 SLC25A28Q96A46 364 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 TOE1Q96GM8 510 aaKnown RBP5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 ZNF333Q96JL9 665 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 KCNA7Q96RP8 456 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 CDRT15Q96T59 188 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 EFHD1Q9BUP0 239 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 MS4A7Q9GZW8 240 aaPredicted RBP5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 GBA3Q9H227 469 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 ALG9Q9H6U8 611 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 DCLRE1BQ9H816 532 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 ACTR8Q9H981 624 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 BPIFA1Q9NP55 256 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 ERVK13-1Q9NX77 482 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 SAMHD1Q9Y3Z3 626 aaKnown RBP5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 ARL5AQ9Y689 179 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 FRMPD3Q5JV73 1810 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 A0A0D9SEW6 157 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 A0A1B0GTL3 188 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 WIPF1O43516 503 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 KAT7O95251 611 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 NSA2O95478 260 aaKnown RBP5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 SLC35E2BP0CK96 405 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 AKR1A1P14550 325 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 ZNF8P17098 575 aaPredicted RBP5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 XRCC1P18887 633 aaPredicted RBP5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 UGT1A6P19224 532 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 BMP8BP34820 402 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 SPRP35270 261 aaPredicted RBP5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 LIMK2P53671 638 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 RPL23AP62750 156 aaKnown RBP5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 BNC1Q01954 994 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 ANKRD55Q3KP44 614 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 PRSS55Q6UWB4 352 aaPredicted RBP5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 CD300LGQ6UXG3 332 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 ZC3HC1Q86WB0 502 aaKnown RBP5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 VRK2Q86Y07 508 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 LIX1Q8N485 282 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 TXNDC5Q8NBS9 432 aaKnown RBP5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 C11orf65Q8NCR3 313 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 OR13C4Q8NGS5 318 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 OIT3Q8WWZ8 545 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 IGSF8Q969P0 613 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 TBL1YQ9BQ87 522 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 CDADC1Q9BWV3 514 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 UPF3AQ9H1J1 476 aaKnown RBP5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 GEMIN7Q9H840 131 aaKnown RBP5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 SYNPO2LQ9H987 977 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 SSU72Q9NP77 194 aaKnown RBP5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 NDE1Q9NXR1 346 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 CCDC167Q9P0B6 97 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 ABI3Q9P2A4 366 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 OSGIN2Q9Y236 505 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 TET1Q8NFU7 2136 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 LOC102723971A0A1B0GUV8 181 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 KCNU1A8MYU2 1149 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 CAPN1P07384 714 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 SPATA31D3P0C874 917 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 HSMCR30P0CW71 290 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 G6PDP11413 515 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 MSR1P21757 451 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 FPR2P25090 351 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 PRDX6P30041 224 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 SLC6A4P31645 630 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 VHLP40337 213 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 SLC1A3P43003 542 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 GLUD2P49448 558 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 SERPINB8P50452 374 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 SERPINB9P50453 376 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 SLC18A1P54219 525 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 CCNIQ14094 377 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 RCAN2Q14206 197 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 MFSD13AQ14CX5 517 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 FAM171A1Q5VUB5 890 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 NADSYN1Q6IA69 706 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 TMEM81Q6P7N7 255 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 SPATA31D4Q6ZUB0 917 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 ADIPOR2Q86V24 386 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 Q8N1Y9 231 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 RNF141Q8WVD5 230 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 NUDT11Q96G61 164 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 ZFYVE19Q96K21 471 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 TMEM168Q9H0V1 697 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 OPN3Q9H1Y3 402 aaPredicted RBP5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 POMKQ9H5K3 350 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 EPHX3Q9H6B9 360 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 TLE6Q9H808 572 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 DMAP1Q9NPF5 467 aaPredicted RBP5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 ELOVL2Q9NXB9 296 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 SLCO1C1Q9NYB5 712 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 AHSPQ9NZD4 102 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 ADA2Q9NZK5 511 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 PAIP2BQ9ULR5 123 aaKnown RBP5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 SCML1Q9UN30 329 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 BTRCQ9Y297 605 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 C7orf72A4D263 438 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 TMEM247A6NEH6 219 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 ERI2A8K979 691 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 E9PAM4 449 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms