RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 DHRS13Q6UX07 377 aa25.81■■□□□ 1.72
CPNE1-203ENST00000397442 COX15Q7KZN9 410 aa25.81■■□□□ 1.72
CPNE1-203ENST00000397442 PMEPA1Q969W9 287 aa25.81■■□□□ 1.72
CPNE1-203ENST00000397442 OR1F2PQ96R84 312 aa25.81■■□□□ 1.72
CPNE1-203ENST00000397442 CMKLR1Q99788 373 aa25.81■■□□□ 1.72
CPNE1-203ENST00000397442 SLC7A5P2Q9GIP4 190 aa25.81■■□□□ 1.72
CPNE1-203ENST00000397442 TRPC4Q9UBN4 977 aa25.81■■□□□ 1.72
CPNE1-203ENST00000397442 RNF103-CHMP3A0A140T963 221 aa25.8■■□□□ 1.72
CPNE1-203ENST00000397442 OR2W5A6NFC9 320 aa25.8■■□□□ 1.72
CPNE1-203ENST00000397442 B4E171 279 aa25.8■■□□□ 1.72
CPNE1-203ENST00000397442 DLL1O00548 723 aa25.8■■□□□ 1.72
CPNE1-203ENST00000397442 DKK1O94907 266 aa25.8■■□□□ 1.72
CPNE1-203ENST00000397442 ATXN8OSP0DMR3 200 aa25.8■■□□□ 1.72
CPNE1-203ENST00000397442 HTR1EP28566 365 aa25.8■■□□□ 1.72
CPNE1-203ENST00000397442 SOX18P35713 384 aa25.8■■□□□ 1.72
CPNE1-203ENST00000397442 TSPAN7P41732 249 aa25.8■■□□□ 1.72
CPNE1-203ENST00000397442 IGLV3-21P80748 117 aaPredicted RBP25.8■■□□□ 1.72
CPNE1-203ENST00000397442 RGNQ15493 299 aa25.8■■□□□ 1.72
CPNE1-203ENST00000397442 SAXO2Q658L1 398 aa25.8■■□□□ 1.72
CPNE1-203ENST00000397442 CPZQ66K79 652 aa25.8■■□□□ 1.72
CPNE1-203ENST00000397442 PTRH1Q86Y79 214 aaKnown RBP25.8■■□□□ 1.72
CPNE1-203ENST00000397442 FAM120BQ96EK7 910 aaKnown RBP25.8■■□□□ 1.72
CPNE1-203ENST00000397442 CHST8Q9H2A9 424 aa25.8■■□□□ 1.72
CPNE1-203ENST00000397442 PRTFDC1Q9NRG1 225 aa25.8■■□□□ 1.72
CPNE1-203ENST00000397442 ENTPD5O75356 428 aa25.8■■□□□ 1.72
CPNE1-203ENST00000397442 BCAS2O75934 225 aaPredicted RBP25.8■■□□□ 1.72
CPNE1-203ENST00000397442 ATP1B1P05026 303 aa25.8■■□□□ 1.72
CPNE1-203ENST00000397442 PPP2R1BP30154 601 aa25.8■■□□□ 1.72
CPNE1-203ENST00000397442 GPC1P35052 558 aa25.8■■□□□ 1.72
CPNE1-203ENST00000397442 CCT3P49368 545 aaKnown RBP25.8■■□□□ 1.72
CPNE1-203ENST00000397442 HSD17B7P56937 341 aa25.8■■□□□ 1.72
CPNE1-203ENST00000397442 ABHD18Q0P651 414 aa25.8■■□□□ 1.72
CPNE1-203ENST00000397442 COX20Q5RI15 118 aa25.8■■□□□ 1.72
CPNE1-203ENST00000397442 DDX59Q5T1V6 619 aaKnown RBP eCLIP25.8■■□□□ 1.722e-6■■□□□ 13.7
CPNE1-203ENST00000397442 ARHGAP40Q5TG30 622 aa25.8■■□□□ 1.72
CPNE1-203ENST00000397442 CLIP3Q96DZ5 547 aa25.8■■□□□ 1.72
CPNE1-203ENST00000397442 NEURL3Q96EH8 262 aa25.8■■□□□ 1.72
CPNE1-203ENST00000397442 NUP210LQ5VU65 1888 aa25.79■■□□□ 1.72
CPNE1-203ENST00000397442 CLDN4O14493 209 aa25.79■■□□□ 1.72
CPNE1-203ENST00000397442 CSO75390 466 aaKnown RBP25.79■■□□□ 1.72
CPNE1-203ENST00000397442 BMP10O95393 424 aa25.79■■□□□ 1.72
CPNE1-203ENST00000397442 MT-CO3P00414 261 aa25.79■■□□□ 1.72
CPNE1-203ENST00000397442 HBQ1P09105 142 aa25.79■■□□□ 1.72
CPNE1-203ENST00000397442 RORAP35398 523 aa25.79■■□□□ 1.72
CPNE1-203ENST00000397442 CHI3L1P36222 383 aaPredicted RBP25.79■■□□□ 1.72
CPNE1-203ENST00000397442 TRAP1Q12931 704 aaKnown RBP25.79■■□□□ 1.72
CPNE1-203ENST00000397442 BNIP2Q12982 314 aa25.79■■□□□ 1.72
CPNE1-203ENST00000397442 SLC13A2Q13183 592 aa25.79■■□□□ 1.72
CPNE1-203ENST00000397442 TMEM107Q6UX40 140 aa25.79■■□□□ 1.72
CPNE1-203ENST00000397442 TMEM64Q6YI46 380 aa25.79■■□□□ 1.72
CPNE1-203ENST00000397442 SERPINA11Q86U17 422 aa25.79■■□□□ 1.72
CPNE1-203ENST00000397442 ZC3H7AQ8IWR0 971 aaKnown RBP25.79■■□□□ 1.72
CPNE1-203ENST00000397442 ADCY4Q8NFM4 1077 aa25.79■■□□□ 1.72
CPNE1-203ENST00000397442 OR2T12Q8NG77 320 aa25.79■■□□□ 1.72
CPNE1-203ENST00000397442 OR52N2Q8NGI0 321 aa25.79■■□□□ 1.72
CPNE1-203ENST00000397442 ELP4Q96EB1 424 aa25.79■■□□□ 1.72
CPNE1-203ENST00000397442 YIPF2Q9BWQ6 316 aa25.79■■□□□ 1.72
CPNE1-203ENST00000397442 STRADBQ9C0K7 418 aa25.79■■□□□ 1.72
CPNE1-203ENST00000397442 SEMA3GQ9NS98 782 aa25.79■■□□□ 1.72
CPNE1-203ENST00000397442 EGFL7Q9UHF1 273 aa25.79■■□□□ 1.72
CPNE1-203ENST00000397442 CORO2BQ9UQ03 480 aa25.79■■□□□ 1.72
CPNE1-203ENST00000397442 LOXL2Q9Y4K0 774 aa25.79■■□□□ 1.72
CPNE1-203ENST00000397442 TMX2-CTNND1H3BSU7 103 aa25.78■■□□□ 1.72
CPNE1-203ENST00000397442 ONECUT2O95948 504 aa25.78■■□□□ 1.72
CPNE1-203ENST00000397442 ITIH1P19827 911 aa25.78■■□□□ 1.72
CPNE1-203ENST00000397442 CCNIQ14094 377 aa25.78■■□□□ 1.72
CPNE1-203ENST00000397442 FLOT2Q14254 428 aa25.78■■□□□ 1.72
CPNE1-203ENST00000397442 C6orf163Q5TEZ5 329 aa25.78■■□□□ 1.72
CPNE1-203ENST00000397442 RNF130Q86XS8 419 aa25.78■■□□□ 1.72
CPNE1-203ENST00000397442 LIN37Q96GY3 246 aaPredicted RBP25.78■■□□□ 1.72
CPNE1-203ENST00000397442 SLC39A1Q9NY26 324 aa25.78■■□□□ 1.72
CPNE1-203ENST00000397442 AKAP7Q9P0M2 348 aaPredicted RBP25.78■■□□□ 1.72
CPNE1-203ENST00000397442 FAM220BPB1ANY3 271 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 KCNK5O95279 499 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 KRT75O95678 551 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 SLC35E2P0CK97 266 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 ZNF28P17035 718 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 MAOAP21397 527 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 IL10P22301 178 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 SOX11P35716 441 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 MC3RP41968 323 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 CASP9P55211 416 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 VAC14Q08AM6 782 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 ADRM1Q16186 407 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 NKAIN1Q4KMZ8 207 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 C6orf120Q7Z4R8 191 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 SFXN5Q8TD22 340 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 KAT2AQ92830 837 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 MGRN1O60291 552 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 SLC34A2O95436 690 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 ETV5P41161 510 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 ERFP50548 548 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 EFNA3P52797 238 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 MRPS35P82673 323 aaKnown RBP25.77■■□□□ 1.72
CPNE1-203ENST00000397442 SPDYE7PQ495Y7 208 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 ZNF628Q5EBL2 1059 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 VWA2Q5GFL6 755 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 ANGPTL8Q6UXH0 198 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 PTOV1Q86YD1 416 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 OR7G2Q8NG99 324 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms