RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 TCEANCQ8N8B7 351 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 OR56B2PQ8NGI1 322 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 ESAMQ96AP7 390 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 ISOC1Q96CN7 298 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 SAV1Q9H4B6 383 aaPredicted RBP11.98□□□□□ -0.49
VPS13A-204ENST00000376634 TMEM233B4DJY2 109 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 MELKQ14680 651 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 TSPAN33Q86UF1 283 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 OR13C4Q8NGS5 318 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 CIDECQ96AQ7 238 aaPredicted RBP11.97□□□□□ -0.49
VPS13A-204ENST00000376634 RRNAD1Q96FB5 475 aaKnown RBP11.97□□□□□ -0.49
VPS13A-204ENST00000376634 FAM83CQ9BQN1 747 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 C2orf42Q9NWW7 574 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 YLPM1P49750 1951 aaKnown RBP11.97□□□□□ -0.49
VPS13A-204ENST00000376634 A8MT66 165 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 FAAHO00519 579 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 RBBP9O75884 186 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 NIPAL4Q0D2K0 466 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 EPGNQ6UW88 154 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 OR51G2Q8NGK0 314 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 TCTEX1D2Q8WW35 142 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 GLYATL1Q969I3 302 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 RBCK1Q9BYM8 510 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 REV1Q9UBZ9 1251 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 C2orf72A6NCS6 295 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 GMDSO60547 372 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 INHAP05111 366 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 ALDH3B1P43353 468 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 ACTBP60709 375 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 ACTG1P63261 375 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 KCNC3Q14003 757 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 GBX1Q14549 363 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 CEACAM19Q7Z692 300 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 TSGA13Q96PP4 275 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 PDE7BQ9NP56 450 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 B3GNT2Q9NY97 397 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 TMEM98Q9Y2Y6 226 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 C12orf71A8MTZ7 269 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 SIX3O95343 332 aaPredicted RBP11.97□□□□□ -0.49
VPS13A-204ENST00000376634 HTR2BP41595 481 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 CAMLGP49069 296 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 RAB28P51157 221 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 GPR143P51810 404 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 GPR157Q5UAW9 335 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 SLC35F5Q8WV83 523 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 PHOX2BQ99453 314 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 PIGVQ9NUD9 493 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 NOTCH3Q9UM47 2321 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 GGT3PA6NGU5 568 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 POP7O75817 140 aaKnown RBP11.97□□□□□ -0.49
VPS13A-204ENST00000376634 GABRA3P34903 492 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 SOX9P48436 509 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 HNRNPKP61978 463 aaKnown RBP eCLIP11.97□□□□□ -0.49
VPS13A-204ENST00000376634 ZNF674Q2M3X9 581 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 AWAT2Q6E213 333 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 ZNF675Q8TD23 568 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 FAM86C1Q9NVL1 165 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 PRSS51A0A1B0GVH4 220 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 KCNJ11Q14654 390 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 KIAA0895LQ68EN5 471 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 SLC18B1Q6NT16 456 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 OR6Q1Q8NGQ2 317 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 OR5H2Q8NGV7 314 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 GLYATL2Q8WU03 294 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 RPF2Q9H7B2 306 aaKnown RBP11.97□□□□□ -0.49
VPS13A-204ENST00000376634 VSTM2BA6NLU5 285 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 GGT2P36268 569 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 OR2AP1Q8NGE2 309 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 BBS10Q8TAM1 723 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 OR6C74A6NCV1 312 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 DUX1O43812 170 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 PTGIRP43119 386 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 ERVK-16P61578 105 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 CYP1B1Q16678 543 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 ARHGAP11AQ6P4F7 1023 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 TM9SF4Q92544 642 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 CD244Q9BZW8 370 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 MMP27Q9H306 513 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 TMEM100Q9NV29 134 aa11.97□□□□□ -0.49
VPS13A-204ENST00000376634 ANKRD28O15084 1053 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 CSTAP01040 98 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 ASGR2P07307 311 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 CHRNB2P17787 502 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 AGTRAPQ6RW13 159 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 SUSD3Q96L08 255 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 ZDHHC2Q9UIJ5 367 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 NOCTQ9UK39 431 aaKnown RBP11.96□□□□□ -0.49
VPS13A-204ENST00000376634 RNF11Q9Y3C5 154 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 ACOT7O00154 380 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 CPNE6O95741 557 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 TBX18O95935 607 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 PLCXD2Q0VAA5 305 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 HACD2Q6Y1H2 254 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 PIGWQ7Z7B1 504 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 OR5T1Q8NG75 326 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 KLRG1Q96E93 195 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 C11orf49Q9H6J7 331 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 FANCMQ8IYD8 2048 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 DOT1LQ8TEK3 1739 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 LOC102723532A0A0G2JNH3 316 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms