RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 ERVK-6Q9BXR3 956 aa14.75□□□□□ -0.05
CKS1B-202ENST00000368436 DDX31Q9H8H2 851 aaKnown RBP14.75□□□□□ -0.05
CKS1B-202ENST00000368436 ACKR4Q9NPB9 350 aa14.75□□□□□ -0.05
CKS1B-202ENST00000368436 LYARQ9NX58 379 aaKnown RBP14.75□□□□□ -0.05
CKS1B-202ENST00000368436 QPCTLQ9NXS2 382 aa14.75□□□□□ -0.05
CKS1B-202ENST00000368436 SPRR3Q9UBC9 169 aa14.75□□□□□ -0.05
CKS1B-202ENST00000368436 BOKQ9UMX3 212 aaPredicted RBP14.75□□□□□ -0.05
CKS1B-202ENST00000368436 ERVK-19Q9WJR5 959 aa14.75□□□□□ -0.05
CKS1B-202ENST00000368436 UTP11Q9Y3A2 253 aaKnown RBP14.75□□□□□ -0.05
CKS1B-202ENST00000368436 CHCHD2Q9Y6H1 151 aaPredicted RBP14.75□□□□□ -0.05
CKS1B-202ENST00000368436 A0A087X1B8 175 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 A0A0A6YYD5 115 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 IQANK1A0A1B0GTG1 560 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 A0A1W2PR48 441 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 HMX2A2RU54 273 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 LRRC3CA6NJW4 275 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 WASHC1A8K0Z3 465 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 CLPSP04118 112 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 C2P06681 752 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 GABRA1P14867 456 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 SERPINB3P29508 390 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 BUD31P41223 144 aaPredicted RBP14.74□□□□□ -0.05
CKS1B-202ENST00000368436 ALDH18A1P54886 795 aaKnown RBP14.74□□□□□ -0.05
CKS1B-202ENST00000368436 DLX5P56178 289 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 SLC37A1P57057 533 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 KCNJ2P63252 427 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 IRF9Q00978 393 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 ZNF267Q14586 743 aaPredicted RBP14.74□□□□□ -0.05
CKS1B-202ENST00000368436 EBPQ15125 230 aaKnown RBP14.74□□□□□ -0.05
CKS1B-202ENST00000368436 PCBP2Q15366 365 aaKnown RBP eCLIP14.74□□□□□ -0.05
CKS1B-202ENST00000368436 TRADDQ15628 312 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 PRAMEF20Q5VT98 475 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 RNF111Q6ZNA4 994 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 SLC29A4Q7RTT9 530 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 CCDC25Q86WR0 208 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 DOK4Q8TEW6 326 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 RIT1Q92963 219 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 REPS1Q96D71 796 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 WWTR1Q9GZV5 400 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 EXO5Q9H790 373 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 ACTR8Q9H981 624 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 CNOT11Q9UKZ1 510 aaKnown RBP14.74□□□□□ -0.05
CKS1B-202ENST00000368436 L3MBTL1Q9Y468 752 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 ANGPTL3Q9Y5C1 460 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 EXPH5Q8NEV8 1989 aa14.74□□□□□ -0.05
CKS1B-202ENST00000368436 LRRC14BA6NHZ5 514 aa14.73□□□□□ -0.05
CKS1B-202ENST00000368436 OR6C76A6NM76 312 aa14.73□□□□□ -0.05
CKS1B-202ENST00000368436 FAM47E-STBD1D6RA91 191 aa14.73□□□□□ -0.05
CKS1B-202ENST00000368436 TMPRSS11DO60235 418 aa14.73□□□□□ -0.05
CKS1B-202ENST00000368436 EEDO75530 441 aaKnown RBP14.73□□□□□ -0.05
CKS1B-202ENST00000368436 FAM58BPP0C7Q3 252 aa14.73□□□□□ -0.05
CKS1B-202ENST00000368436 PHEXP78562 749 aa14.73□□□□□ -0.05
CKS1B-202ENST00000368436 ACAP2Q15057 778 aa14.73□□□□□ -0.05
CKS1B-202ENST00000368436 NTRK2Q16620 822 aa14.73□□□□□ -0.05
CKS1B-202ENST00000368436 PFKFB4Q16877 469 aa14.73□□□□□ -0.05
CKS1B-202ENST00000368436 FAM83EQ2M2I3 478 aa14.73□□□□□ -0.05
CKS1B-202ENST00000368436 SLC25A35Q3KQZ1 300 aa14.73□□□□□ -0.05
CKS1B-202ENST00000368436 RIPPLY2Q5TAB7 128 aa14.73□□□□□ -0.05
CKS1B-202ENST00000368436 METTL2BQ6P1Q9 378 aaKnown RBP14.73□□□□□ -0.05
CKS1B-202ENST00000368436 MYLK4Q86YV6 388 aaPredicted RBP14.73□□□□□ -0.05
CKS1B-202ENST00000368436 ZNF441Q8N8Z8 693 aa14.73□□□□□ -0.05
CKS1B-202ENST00000368436 L3MBTL4Q8NA19 623 aa14.73□□□□□ -0.05
CKS1B-202ENST00000368436 MYRIPQ8NFW9 859 aa14.73□□□□□ -0.05
CKS1B-202ENST00000368436 OR10G3Q8NGC4 313 aa14.73□□□□□ -0.05
CKS1B-202ENST00000368436 WDR20Q8TBZ3 569 aa14.73□□□□□ -0.05
CKS1B-202ENST00000368436 GPR78Q96P69 363 aa14.73□□□□□ -0.05
CKS1B-202ENST00000368436 RAB17Q9H0T7 212 aa14.73□□□□□ -0.05
CKS1B-202ENST00000368436 SPG11Q96JI7 2443 aa14.73□□□□□ -0.05
CKS1B-202ENST00000368436 ANKRD33BA6NCL7 494 aa14.72□□□□□ -0.05
CKS1B-202ENST00000368436 GLOD5A6NK44 160 aa14.72□□□□□ -0.05
CKS1B-202ENST00000368436 FOXE1O00358 373 aaPredicted RBP14.72□□□□□ -0.05
CKS1B-202ENST00000368436 OR10H2O60403 315 aa14.72□□□□□ -0.05
CKS1B-202ENST00000368436 KLHL2O95198 593 aa14.72□□□□□ -0.05
CKS1B-202ENST00000368436 SLC35E2P0CK97 266 aa14.72□□□□□ -0.05
CKS1B-202ENST00000368436 NR2F6P10588 404 aa14.72□□□□□ -0.05
CKS1B-202ENST00000368436 GFAPP14136 432 aa14.72□□□□□ -0.05
CKS1B-202ENST00000368436 CD1EP15812 388 aa14.72□□□□□ -0.05
CKS1B-202ENST00000368436 MYBPHQ13203 477 aa14.72□□□□□ -0.05
CKS1B-202ENST00000368436 GTF2H2Q13888 395 aa14.72□□□□□ -0.05
CKS1B-202ENST00000368436 CPSF6Q16630 551 aaKnown RBP eCLIP14.72□□□□□ -0.05
CKS1B-202ENST00000368436 MROH9Q5TGP6 573 aa14.72□□□□□ -0.05
CKS1B-202ENST00000368436 GTF2H2CQ6P1K8 395 aa14.72□□□□□ -0.05
CKS1B-202ENST00000368436 CYP20A1Q6UW02 462 aa14.72□□□□□ -0.05
CKS1B-202ENST00000368436 TMEM200AQ86VY9 491 aa14.72□□□□□ -0.05
CKS1B-202ENST00000368436 FAM13CQ8NE31 585 aa14.72□□□□□ -0.05
CKS1B-202ENST00000368436 NEIL3Q8TAT5 605 aa14.72□□□□□ -0.05
CKS1B-202ENST00000368436 UCN3Q969E3 161 aa14.72□□□□□ -0.05
CKS1B-202ENST00000368436 TP53INP1Q96A56 240 aa14.72□□□□□ -0.05
CKS1B-202ENST00000368436 GAL3ST4Q96RP7 486 aa14.72□□□□□ -0.05
CKS1B-202ENST00000368436 SLC6A15Q9H2J7 730 aa14.72□□□□□ -0.05
CKS1B-202ENST00000368436 IPPKQ9H8X2 491 aa14.72□□□□□ -0.05
CKS1B-202ENST00000368436 SNX15Q9NRS6 342 aa14.72□□□□□ -0.05
CKS1B-202ENST00000368436 ALKBH4Q9NXW9 302 aa14.72□□□□□ -0.05
CKS1B-202ENST00000368436 RNF11Q9Y3C5 154 aa14.72□□□□□ -0.05
CKS1B-202ENST00000368436 TNPO3Q9Y5L0 923 aaKnown RBP14.72□□□□□ -0.05
CKS1B-202ENST00000368436 A0A096LPK6 155 aa14.71□□□□□ -0.05
CKS1B-202ENST00000368436 TRIM3O75382 744 aaPredicted RBP14.71□□□□□ -0.05
CKS1B-202ENST00000368436 AIFM1O95831 613 aa14.71□□□□□ -0.05
CKS1B-202ENST00000368436 DNAJA1P31689 397 aaKnown RBP14.71□□□□□ -0.05
CKS1B-202ENST00000368436 PIK3CGP48736 1102 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms