RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 GIMAP4Q9NUV9 329 aa17.06■□□□□ 0.32
SMARCD3-202ENST00000356800 RARRES3Q9UL19 164 aa17.06■□□□□ 0.32
SMARCD3-202ENST00000356800 SNX8Q9Y5X2 465 aa17.06■□□□□ 0.32
SMARCD3-202ENST00000356800 ZNF780BQ9Y6R6 833 aa17.06■□□□□ 0.32
SMARCD3-202ENST00000356800 MYOCOSA0A1B0GUC4 107 aa17.05■□□□□ 0.32
SMARCD3-202ENST00000356800 A0A1B0GX78 115 aa17.05■□□□□ 0.32
SMARCD3-202ENST00000356800 ELOVL7A1L3X0 281 aa17.05■□□□□ 0.32
SMARCD3-202ENST00000356800 RFPL3O75679 317 aa17.05■□□□□ 0.32
SMARCD3-202ENST00000356800 GPR75O95800 540 aa17.05■□□□□ 0.32
SMARCD3-202ENST00000356800 NTRK1P04629 796 aa17.05■□□□□ 0.32
SMARCD3-202ENST00000356800 GGT1P19440 569 aa17.05■□□□□ 0.32
SMARCD3-202ENST00000356800 UQCRC2P22695 453 aa17.05■□□□□ 0.32
SMARCD3-202ENST00000356800 CCKBRP32239 447 aa17.05■□□□□ 0.32
SMARCD3-202ENST00000356800 SOAT1P35610 550 aa17.05■□□□□ 0.32
SMARCD3-202ENST00000356800 SOX11P35716 441 aa17.05■□□□□ 0.32
SMARCD3-202ENST00000356800 INSM1Q01101 510 aaPredicted RBP17.05■□□□□ 0.32
SMARCD3-202ENST00000356800 LTB4RQ15722 352 aa17.05■□□□□ 0.32
SMARCD3-202ENST00000356800 C1orf189Q5VU69 101 aa17.05■□□□□ 0.32
SMARCD3-202ENST00000356800 SPPL2CQ8IUH8 684 aa17.05■□□□□ 0.32
SMARCD3-202ENST00000356800 SLC38A9Q8NBW4 561 aa17.05■□□□□ 0.32
SMARCD3-202ENST00000356800 AGBL5Q8NDL9 886 aa17.05■□□□□ 0.32
SMARCD3-202ENST00000356800 ZFP28Q8NHY6 868 aa17.05■□□□□ 0.32
SMARCD3-202ENST00000356800 SPATA9Q9BWV2 254 aa17.05■□□□□ 0.32
SMARCD3-202ENST00000356800 GORASP2Q9H8Y8 452 aa17.05■□□□□ 0.32
SMARCD3-202ENST00000356800 RNF103-CHMP3A0A140T963 221 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 TGFBR3LH3BV60 316 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 ATXN8OSP0DMR3 200 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 CCL4P13236 92 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 CPMP14384 443 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 MPIP34949 423 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 XCR1P46094 333 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 CLDN6P56747 220 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 ILKQ13418 452 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 COX20Q5RI15 118 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 GLYATQ6IB77 296 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 RHBDD2Q6NTF9 364 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 MICU2Q8IYU8 434 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 LRRC25Q8N386 305 aaPredicted RBP17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 OR52E4Q8NGH9 312 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 OR9A2Q8NGT5 310 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 CHST8Q9H2A9 424 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 CDC14AQ9UNH5 594 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 SRPK3Q9UPE1 567 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 ZNF292O60281 2723 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 OR2W5A6NFC9 320 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 JRKO75564 520 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 CDC123O75794 336 aaPredicted RBP17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 FGF5P12034 268 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 SLC7A1P30825 629 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 SOX18P35713 384 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 CASP9P55211 416 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 E2F1Q01094 437 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 DSG2Q14126 1118 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 RGNQ15493 299 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 SAXO2Q658L1 398 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 CPZQ66K79 652 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 TMEM126BQ8IUX1 230 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 SAMD14Q8IZD0 417 aaPredicted RBP17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 ADAMTS18Q8TE60 1221 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 TBC1D20Q96BZ9 403 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 CTRCQ99895 268 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 DPH2Q9BQC3 489 aaPredicted RBP17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 ZNF304Q9HCX3 659 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 CLDN16Q9Y5I7 305 aa17.04■□□□□ 0.32
SMARCD3-202ENST00000356800 TCRBV5S2A0A599 114 aa17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 GMNNO75496 209 aa17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 SCRG1O75711 98 aa17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 KCNK5O95279 499 aa17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 BAG2O95816 211 aa17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 NCK1P16333 377 aa17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 PORP16435 677 aaPredicted RBP17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 GPC1P35052 558 aa17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 CHI3L1P36222 383 aaPredicted RBP17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 PTDSS1P48651 473 aaKnown RBP17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 BTG2P78543 158 aa17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 VAC14Q08AM6 782 aa17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 MAP7Q14244 749 aa17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 ADRM1Q16186 407 aa17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 MTX3Q5HYI7 312 aa17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 CDCP2Q5VXM1 449 aa17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 ERICH5Q6P6B1 374 aa17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 RNF111Q6ZNA4 994 aa17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 PPP1R3BQ86XI6 285 aa17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 ZNF595Q8IYB9 648 aa17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 ADCY4Q8NFM4 1077 aa17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 NEURL3Q96EH8 262 aa17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 PHOX2BQ99453 314 aa17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 LANCL2Q9NS86 450 aa17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 SLC22A11Q9NSA0 550 aa17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 C6orf203Q9P0P8 240 aaPredicted RBP17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 MAP4K5Q9Y4K4 846 aa17.03■□□□□ 0.32
SMARCD3-202ENST00000356800 PROB1E7EW31 1015 aa17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 GSTA4O15217 222 aa17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 CTNSO60931 367 aa17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 KRT75O95678 551 aa17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 GPIP06744 558 aa17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 FHP07954 510 aa17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 NUDT7P0C024 238 aa17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 UMPSP11172 480 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms