RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 LINC00299Q6ZSB3 139 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 OR56A4Q8NGH8 313 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 OR1E3Q8WZA6 343 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 YIPF6Q96EC8 236 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 BARD1Q99728 777 aaKnown RBP14.35□□□□□ -0.11
BRAT1-201ENST00000340611 KCNS3Q9BQ31 491 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 RIBC2Q9H4K1 309 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 FBRSQ9HAH7 460 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 C3orf18Q9UK00 162 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 SH2B3Q9UQQ2 575 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 DNMT3AQ9Y6K1 912 aaPredicted RBP14.35□□□□□ -0.11
BRAT1-201ENST00000340611 OR5K4A6NMS3 321 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 BTN3A3O00478 584 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 KPNA5O15131 536 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 PI15O43692 258 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 PSIP1O75475 530 aaKnown RBP14.35□□□□□ -0.11
BRAT1-201ENST00000340611 EML2O95834 649 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 MT-ND2P03891 347 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 C8GP07360 202 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 MPC1LP0DKB6 136 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 AKR1D1P51857 326 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 POU4F3Q15319 338 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 PCBP2Q15366 365 aaKnown RBP eCLIP14.35□□□□□ -0.11
BRAT1-201ENST00000340611 NR6A1Q15406 480 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 ADNP2Q6IQ32 1131 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 IL27RAQ6UWB1 636 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 B3GNT8Q7Z7M8 397 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 PHACTR4Q8IZ21 702 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 METTL6Q8TCB7 284 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 ZDHHC5Q9C0B5 715 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 MMP27Q9H306 513 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 IFT22Q9H7X7 185 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 USP36Q9P275 1121 aaKnown RBP14.35□□□□□ -0.11
BRAT1-201ENST00000340611 EIF3KQ9UBQ5 218 aaKnown RBP14.35□□□□□ -0.11
BRAT1-201ENST00000340611 TMEFF2Q9UIK5 374 aaPredicted RBP14.35□□□□□ -0.11
BRAT1-201ENST00000340611 TBC1D24Q9ULP9 559 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 NEUROG3Q9Y4Z2 214 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 FANCMQ8IYD8 2048 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 SNRNP200O75643 2136 aaKnown RBP14.34□□□□□ -0.11
BRAT1-201ENST00000340611 METTL15A6NJ78 407 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 LRRC72A6NJI9 287 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 CAPN5O15484 640 aaPredicted RBP14.34□□□□□ -0.11
BRAT1-201ENST00000340611 C1orf105O95561 183 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 TALDO1P37837 337 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 PRIM2P49643 509 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 DMWDQ09019 674 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 GPR68Q15743 365 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 GTDC1Q4AE62 458 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 SPANXN2Q5MJ10 180 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 PRAMEF14Q5SWL7 426 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 GCNT7Q6ZNI0 430 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 OR13H1Q8NG92 308 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 ZFAND1Q8TCF1 268 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 RDH12Q96NR8 316 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 OR52A5Q9H2C5 316 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 TCEAL2Q9H3H9 227 aaPredicted RBP14.34□□□□□ -0.11
BRAT1-201ENST00000340611 SAV1Q9H4B6 383 aaPredicted RBP14.34□□□□□ -0.11
BRAT1-201ENST00000340611 KAT8Q9H7Z6 458 aaKnown RBP14.34□□□□□ -0.11
BRAT1-201ENST00000340611 DIABLOQ9NR28 239 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 SPATA6Q9NWH7 488 aaPredicted RBP14.34□□□□□ -0.11
BRAT1-201ENST00000340611 STOX2Q9P2F5 926 aaPredicted RBP14.34□□□□□ -0.11
BRAT1-201ENST00000340611 GPR34Q9UPC5 381 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 NAALAD2Q9Y3Q0 740 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 PCDHB14Q9Y5E9 798 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 TNNI3P19429 210 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 IMPA1P29218 277 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 HAAOP46952 286 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 PFN3P60673 137 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 GRIK2Q13002 908 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 AGERQ15109 404 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 MAMSTRQ6ZN01 415 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 VN1R5Q7Z5H4 357 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 MILR1Q7Z6M3 343 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 DPP10Q8N608 796 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 SLC22A8Q8TCC7 542 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 TRMT61AQ96FX7 289 aaKnown RBP14.34□□□□□ -0.11
BRAT1-201ENST00000340611 IER2Q9BTL4 223 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 WNT16Q9UBV4 365 aa14.34□□□□□ -0.11
BRAT1-201ENST00000340611 CABIN1Q9Y6J0 2220 aa14.33□□□□□ -0.12
BRAT1-201ENST00000340611 QSOX1O00391 747 aa14.33□□□□□ -0.12
BRAT1-201ENST00000340611 KELP23276 732 aa14.33□□□□□ -0.12
BRAT1-201ENST00000340611 STARD6P59095 220 aa14.33□□□□□ -0.12
BRAT1-201ENST00000340611 POLR2GP62487 172 aaKnown RBP eCLIP14.33□□□□□ -0.12
BRAT1-201ENST00000340611 PWP1Q13610 501 aa14.33□□□□□ -0.12
BRAT1-201ENST00000340611 PTGR1Q14914 329 aa14.33□□□□□ -0.12
BRAT1-201ENST00000340611 MFSD13AQ14CX5 517 aa14.33□□□□□ -0.12
BRAT1-201ENST00000340611 ABRAXAS2Q15018 415 aa14.33□□□□□ -0.12
BRAT1-201ENST00000340611 RFTN2Q52LD8 501 aaPredicted RBP14.33□□□□□ -0.12
BRAT1-201ENST00000340611 NDUFAF5Q5TEU4 345 aa14.33□□□□□ -0.12
BRAT1-201ENST00000340611 AGTRAPQ6RW13 159 aa14.33□□□□□ -0.12
BRAT1-201ENST00000340611 ZNF600Q6ZNG1 722 aa14.33□□□□□ -0.12
BRAT1-201ENST00000340611 CEP19Q96LK0 163 aa14.33□□□□□ -0.12
BRAT1-201ENST00000340611 Q96MT0 163 aa14.33□□□□□ -0.12
BRAT1-201ENST00000340611 OR4K3Q96R72 315 aa14.33□□□□□ -0.12
BRAT1-201ENST00000340611 SEC22CQ9BRL7 303 aa14.33□□□□□ -0.12
BRAT1-201ENST00000340611 C1QTNF3Q9BXJ4 246 aa14.33□□□□□ -0.12
BRAT1-201ENST00000340611 EPHX3Q9H6B9 360 aa14.33□□□□□ -0.12
BRAT1-201ENST00000340611 ZNF556Q9HAH1 456 aa14.33□□□□□ -0.12
BRAT1-201ENST00000340611 RDH14Q9HBH5 336 aa14.33□□□□□ -0.12
BRAT1-201ENST00000340611 IMP3Q9NV31 184 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms