RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 PIGGQ5H8A4 983 aa24.48■■□□□ 1.51
CDKN2A-201ENST00000304494 RNFT1Q5M7Z0 435 aa24.48■■□□□ 1.51
CDKN2A-201ENST00000304494 ZYG11AQ6WRX3 759 aa24.48■■□□□ 1.51
CDKN2A-201ENST00000304494 SPPL2CQ8IUH8 684 aa24.48■■□□□ 1.51
CDKN2A-201ENST00000304494 SLC15A4Q8N697 577 aa24.48■■□□□ 1.51
CDKN2A-201ENST00000304494 UCN3Q969E3 161 aa24.48■■□□□ 1.51
CDKN2A-201ENST00000304494 ANKZF1Q9H8Y5 726 aa24.48■■□□□ 1.51
CDKN2A-201ENST00000304494 EMCNQ9ULC0 261 aa24.48■■□□□ 1.51
CDKN2A-201ENST00000304494 ZNF835Q9Y2P0 537 aa24.48■■□□□ 1.51
CDKN2A-201ENST00000304494 C1orf226A1L170 272 aa24.47■■□□□ 1.51
CDKN2A-201ENST00000304494 CDH16O75309 829 aa24.47■■□□□ 1.51
CDKN2A-201ENST00000304494 ASPHQ12797 758 aa24.47■■□□□ 1.51
CDKN2A-201ENST00000304494 C6orf163Q5TEZ5 329 aa24.47■■□□□ 1.51
CDKN2A-201ENST00000304494 Q6ZPB1 254 aaPredicted RBP24.47■■□□□ 1.51
CDKN2A-201ENST00000304494 SH2D5Q6ZV89 423 aa24.47■■□□□ 1.51
CDKN2A-201ENST00000304494 GBP7Q8N8V2 638 aaPredicted RBP24.47■■□□□ 1.51
CDKN2A-201ENST00000304494 EPS8L3Q8TE67 593 aaKnown RBP24.47■■□□□ 1.51
CDKN2A-201ENST00000304494 HBEGFQ99075 208 aa24.47■■□□□ 1.51
CDKN2A-201ENST00000304494 SH3BGRL2Q9UJC5 107 aa24.47■■□□□ 1.51
CDKN2A-201ENST00000304494 SPTBN1Q01082 2364 aaKnown RBP24.46■■□□□ 1.51
CDKN2A-201ENST00000304494 ICE1Q9Y2F5 2266 aa24.46■■□□□ 1.51
CDKN2A-201ENST00000304494 G3V2L1 256 aa24.46■■□□□ 1.51
CDKN2A-201ENST00000304494 ESRRBO95718 433 aa24.46■■□□□ 1.51
CDKN2A-201ENST00000304494 CRHR1P34998 444 aa24.46■■□□□ 1.51
CDKN2A-201ENST00000304494 RFC3P40938 356 aa24.46■■□□□ 1.51
CDKN2A-201ENST00000304494 SLC37A1P57057 533 aa24.46■■□□□ 1.51
CDKN2A-201ENST00000304494 TRA2BP62995 288 aaKnown RBP24.46■■□□□ 1.51
CDKN2A-201ENST00000304494 TCHHL1Q5QJ38 904 aaPredicted RBP24.46■■□□□ 1.51
CDKN2A-201ENST00000304494 GALNT12Q8IXK2 581 aa24.46■■□□□ 1.51
CDKN2A-201ENST00000304494 C1orf52Q8N6N3 182 aaKnown RBP24.46■■□□□ 1.51
CDKN2A-201ENST00000304494 CCNYL1Q8N7R7 359 aa24.46■■□□□ 1.51
CDKN2A-201ENST00000304494 RDH11Q8TC12 318 aa24.46■■□□□ 1.51
CDKN2A-201ENST00000304494 FAIM2Q9BWQ8 316 aa24.46■■□□□ 1.51
CDKN2A-201ENST00000304494 GSTO2Q9H4Y5 243 aa24.46■■□□□ 1.51
CDKN2A-201ENST00000304494 CXorf21Q9HAI6 301 aa24.46■■□□□ 1.51
CDKN2A-201ENST00000304494 PSME2Q9UL46 239 aa24.46■■□□□ 1.51
CDKN2A-201ENST00000304494 PCDHA9Q9Y5H5 950 aa24.46■■□□□ 1.51
CDKN2A-201ENST00000304494 GOLGA6L10A6NI86 522 aa24.45■■□□□ 1.5
CDKN2A-201ENST00000304494 FOXO6A8MYZ6 492 aa24.45■■□□□ 1.5
CDKN2A-201ENST00000304494 H3BQF6 201 aa24.45■■□□□ 1.5
CDKN2A-201ENST00000304494 PROCP04070 461 aa24.45■■□□□ 1.5
CDKN2A-201ENST00000304494 ABOP16442 354 aa24.45■■□□□ 1.5
CDKN2A-201ENST00000304494 XKP51811 444 aa24.45■■□□□ 1.5
CDKN2A-201ENST00000304494 C3AR1Q16581 482 aa24.45■■□□□ 1.5
CDKN2A-201ENST00000304494 ZNF750Q32MQ0 723 aa24.45■■□□□ 1.5
CDKN2A-201ENST00000304494 HIST2H2BCQ6DN03 193 aa24.45■■□□□ 1.5
CDKN2A-201ENST00000304494 SLC48A1Q6P1K1 146 aa24.45■■□□□ 1.5
CDKN2A-201ENST00000304494 GK5Q6ZS86 529 aa24.45■■□□□ 1.5
CDKN2A-201ENST00000304494 DND1Q8IYX4 353 aaKnown RBP24.45■■□□□ 1.5
CDKN2A-201ENST00000304494 OR2M7Q8NG81 312 aa24.45■■□□□ 1.5
CDKN2A-201ENST00000304494 DOK4Q8TEW6 326 aa24.45■■□□□ 1.5
CDKN2A-201ENST00000304494 GAL3ST4Q96RP7 486 aa24.45■■□□□ 1.5
CDKN2A-201ENST00000304494 WWTR1Q9GZV5 400 aa24.45■■□□□ 1.5
CDKN2A-201ENST00000304494 DEPPQ9NTK1 212 aa24.45■■□□□ 1.5
CDKN2A-201ENST00000304494 ACOT7O00154 380 aa24.44■■□□□ 1.5
CDKN2A-201ENST00000304494 COPEO14579 308 aa24.44■■□□□ 1.5
CDKN2A-201ENST00000304494 HS6ST1O60243 411 aa24.44■■□□□ 1.5
CDKN2A-201ENST00000304494 ZNF354AO60765 605 aaPredicted RBP24.44■■□□□ 1.5
CDKN2A-201ENST00000304494 P04436 131 aa24.44■■□□□ 1.5
CDKN2A-201ENST00000304494 CPMP14384 443 aa24.44■■□□□ 1.5
CDKN2A-201ENST00000304494 PORP16435 677 aaPredicted RBP24.44■■□□□ 1.5
CDKN2A-201ENST00000304494 KRT4P19013 534 aa24.44■■□□□ 1.5
CDKN2A-201ENST00000304494 CNR1P21554 472 aa24.44■■□□□ 1.5
CDKN2A-201ENST00000304494 DEKP35659 375 aaKnown RBP24.44■■□□□ 1.5
CDKN2A-201ENST00000304494 EBPQ15125 230 aaKnown RBP24.44■■□□□ 1.5
CDKN2A-201ENST00000304494 SPIN4Q56A73 249 aa24.44■■□□□ 1.5
CDKN2A-201ENST00000304494 RGS9BPQ6ZS82 235 aa24.44■■□□□ 1.5
CDKN2A-201ENST00000304494 AGAP11Q8TF27 550 aa24.44■■□□□ 1.5
CDKN2A-201ENST00000304494 CHTF18Q8WVB6 975 aa24.44■■□□□ 1.5
CDKN2A-201ENST00000304494 TM4SF18Q96CE8 201 aa24.44■■□□□ 1.5
CDKN2A-201ENST00000304494 FAM173AQ9BQD7 235 aa24.44■■□□□ 1.5
CDKN2A-201ENST00000304494 MID1IP1Q9NPA3 183 aa24.44■■□□□ 1.5
CDKN2A-201ENST00000304494 SACM1LQ9NTJ5 587 aa24.44■■□□□ 1.5
CDKN2A-201ENST00000304494 MCM8Q9UJA3 840 aa24.44■■□□□ 1.5
CDKN2A-201ENST00000304494 TINAGQ9UJW2 476 aa24.44■■□□□ 1.5
CDKN2A-201ENST00000304494 NBPF19A0A087WUL8 3843 aa24.44■■□□□ 1.5
CDKN2A-201ENST00000304494 PLIN3O60664 434 aa24.43■■□□□ 1.5
CDKN2A-201ENST00000304494 ESRRAP11474 423 aaPredicted RBP24.43■■□□□ 1.5
CDKN2A-201ENST00000304494 NT5EP21589 574 aa24.43■■□□□ 1.5
CDKN2A-201ENST00000304494 PTGER1P34995 402 aa24.43■■□□□ 1.5
CDKN2A-201ENST00000304494 DNAJB13P59910 316 aa24.43■■□□□ 1.5
CDKN2A-201ENST00000304494 HSF1Q00613 529 aa24.43■■□□□ 1.5
CDKN2A-201ENST00000304494 PLGLB1Q02325 96 aa24.43■■□□□ 1.5
CDKN2A-201ENST00000304494 ZNF791Q3KP31 576 aaPredicted RBP24.43■■□□□ 1.5
CDKN2A-201ENST00000304494 CFAP157Q5JU67 520 aa24.43■■□□□ 1.5
CDKN2A-201ENST00000304494 RPTNQ6XPR3 784 aa24.43■■□□□ 1.5
CDKN2A-201ENST00000304494 CCDC63Q8NA47 563 aa24.43■■□□□ 1.5
CDKN2A-201ENST00000304494 CCDC120Q96HB5 630 aa24.43■■□□□ 1.5
CDKN2A-201ENST00000304494 ACPTQ9BZG2 426 aa24.43■■□□□ 1.5
CDKN2A-201ENST00000304494 CES1P1Q9UKY3 287 aa24.43■■□□□ 1.5
CDKN2A-201ENST00000304494 A0A1W2PS29 197 aa24.42■■□□□ 1.5
CDKN2A-201ENST00000304494 PRRG2O14669 202 aa24.42■■□□□ 1.5
CDKN2A-201ENST00000304494 NADKO95544 446 aaPredicted RBP24.42■■□□□ 1.5
CDKN2A-201ENST00000304494 CLPSP04118 112 aa24.42■■□□□ 1.5
CDKN2A-201ENST00000304494 SERPINB3P29508 390 aa24.42■■□□□ 1.5
CDKN2A-201ENST00000304494 SSTR4P31391 388 aa24.42■■□□□ 1.5
CDKN2A-201ENST00000304494 VSNL1P62760 191 aa24.42■■□□□ 1.5
CDKN2A-201ENST00000304494 FUT7Q11130 342 aa24.42■■□□□ 1.5
CDKN2A-201ENST00000304494 CMPK2Q5EBM0 449 aa24.42■■□□□ 1.5
CDKN2A-201ENST00000304494 FAM219BQ5XKK7 198 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms