RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 KRT73Q86Y46 540 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 OR4N5Q8IXE1 308 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 ARL10Q8N8L6 244 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 ANKRD60Q9BZ19 345 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 CD320Q9NPF0 282 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 ZNF639Q9UID6 485 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 C3orf18Q9UK00 162 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 EMC8O43402 210 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 ATXN8OSP0DMR3 200 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 DNAJA1P31689 397 aaKnown RBP13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 ELOAQ14241 798 aaKnown RBP13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 NDUFA9Q16795 377 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 OR5D16Q8NGK9 328 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 SFXN5Q8TD22 340 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 SLC38A5Q8WUX1 472 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 PROX1Q92786 737 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 KAT2AQ92830 837 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 TAMM41Q96BW9 452 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 OTUB1Q96FW1 271 aaPredicted RBP13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 FAM60AQ9NP50 221 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 THADAQ6YHU6 1953 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 SERPINB7O75635 380 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 HPRP00739 348 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 MC3RP41968 323 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 OR1E2P47887 323 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 GNA13Q14344 377 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 GPR19Q15760 415 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 CYP27C1Q4G0S4 372 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 RPS26P11Q5JNZ5 115 aaPredicted RBP13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 TMEM64Q6YI46 380 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 ZNF786Q8N393 782 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 TTC29Q8NA56 475 aaPredicted RBP13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 NUP43Q8NFH3 380 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 PSMA8Q8TAA3 256 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 GEMIN6Q8WXD5 167 aaKnown RBP13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 RMND5BQ96G75 393 aaPredicted RBP13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 TCTN2Q96GX1 697 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 ING2Q9H160 280 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 A4GALTQ9NPC4 353 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 LRIT1Q9P2V4 623 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 SEC14L3Q9UDX4 400 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 CES1P1Q9UKY3 287 aa13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 MRPS2Q9Y399 296 aaKnown RBP13.68□□□□□ -0.22
SHCBP1-201ENST00000303383 LAMTOR5O43504 91 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 ALPLP05186 524 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 HMGN2P05204 90 aaKnown RBP13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 TNFRSF1BP20333 461 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 SHC2P98077 582 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 GPAT3Q53EU6 434 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 CRB2Q5IJ48 1285 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 ATAD3BQ5T9A4 648 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 ARMC8Q8IUR7 673 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 ATG16L2Q8NAA4 619 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 ZDHHC12Q96GR4 267 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 FBXL20Q96IG2 436 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 SOX17Q9H6I2 414 aaPredicted RBP13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 UCK1Q9HA47 277 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 DNAAF2Q9NVR5 837 aaKnown RBP13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 PDP1Q9P0J1 537 aaPredicted RBP13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 MYRFQ9Y2G1 1151 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 CEP192Q8TEP8 1941 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 DPPA5A6NC42 116 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 HMGN4O00479 90 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 PGM3O95394 542 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 SMIM10L1P0DMW3 83 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 FPR1P21462 350 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 KCNJ10P78508 379 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 ID2Q02363 134 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 LAPTM4AQ15012 233 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 PRSS41Q7RTY9 318 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 CARM1Q86X55 608 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 OFCC1Q8IZS5 231 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 C1orf216Q8TAB5 229 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 SMIM10Q96HG1 83 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 CSF3RQ99062 836 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 LYRM4Q9HD34 91 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 TESMINQ9Y4I5 508 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 SGK494L7N484 410 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 ADAMDEC1O15204 470 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 CLIC3O95833 236 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 ATP6V1B1P15313 513 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 YAP1P46937 504 aaKnown RBP13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 CRISP3P54108 245 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 SPIBQ01892 262 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 AMZ1Q400G9 498 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 SLC36A3Q495N2 470 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 TTC23Q5W5X9 447 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 SHQ1Q6PI26 577 aaKnown RBP13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 CCDC80Q76M96 950 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 SUN3Q8TAQ9 357 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 COL21A1Q96P44 957 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 ZNF347Q96SE7 839 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 ARPC5LQ9BPX5 153 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 OSBPL10Q9BXB5 764 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 TWSG1Q9GZX9 223 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 PDE7BQ9NP56 450 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 SLC22A7Q9Y694 548 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 SCN2AQ99250 2005 aa13.67□□□□□ -0.22
SHCBP1-201ENST00000303383 A0A1B0GTW7 788 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 A0A1W2PS29 197 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms