RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 SLAMF7Q9NQ25 335 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 LANCL2Q9NS86 450 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 THUMPD1Q9NXG2 353 aaKnown RBP12.15□□□□□ -0.46
LSM8-201ENST00000249299 SLC25A37Q9NYZ2 338 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 SLAMF8Q9P0V8 285 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 PTGFRNQ9P2B2 879 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 CD300AQ9UGN4 299 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 CDV3Q9UKY7 258 aaKnown RBP12.15□□□□□ -0.46
LSM8-201ENST00000249299 L3MBTL1Q9Y468 752 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 GLOD5A6NK44 160 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 VSTM2BA6NLU5 285 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 CLIC1O00299 241 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 NVLO15381 856 aaKnown RBP12.14□□□□□ -0.47
LSM8-201ENST00000249299 FGF17O60258 216 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 PLOD3O60568 738 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 TIAF1O95411 115 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 NQO1P15559 274 aaKnown RBP12.14□□□□□ -0.47
LSM8-201ENST00000249299 GPX2P18283 190 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 OR1D4P47884 311 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 ANXA11P50995 505 aaKnown RBP12.14□□□□□ -0.47
LSM8-201ENST00000249299 PRR5P85299 388 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 PLIN5Q00G26 463 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 STX4Q12846 297 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 MAP4K2Q12851 820 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 SLC13A2Q13183 592 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 FXNQ16595 210 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 PRSS53Q2L4Q9 553 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 CCDC157Q569K6 752 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 PRAMEF17Q5VTA0 474 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 SERPINA11Q86U17 422 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 ANKRD46Q86W74 232 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 ZC3H7AQ8IWR0 971 aaKnown RBP12.14□□□□□ -0.47
LSM8-201ENST00000249299 MSRB3Q8IXL7 192 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 CLECL1Q8IZS7 167 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 SLC38A9Q8NBW4 561 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 OR56A1Q8NGH5 318 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 ZFP90Q8TF47 636 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 TMEM125Q96AQ2 219 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 NEURL3Q96EH8 262 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 RBM18Q96H35 190 aaKnown RBP12.14□□□□□ -0.47
LSM8-201ENST00000249299 CTRCQ99895 268 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 CPPED1Q9BRF8 314 aaPredicted RBP12.14□□□□□ -0.47
LSM8-201ENST00000249299 ULBP3Q9BZM4 244 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 SPRY4Q9C004 299 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 KAT8Q9H7Z6 458 aaKnown RBP12.14□□□□□ -0.47
LSM8-201ENST00000249299 TPT1P8Q9HAU6 139 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 SLC22A11Q9NSA0 550 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 IFT80Q9P2H3 777 aaPredicted RBP12.14□□□□□ -0.47
LSM8-201ENST00000249299 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.14□□□□□ -0.47
LSM8-201ENST00000249299 BCAP29Q9UHQ4 241 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 ERVK-11Q9UQG0 969 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 NEUROG3Q9Y4Z2 214 aa12.14□□□□□ -0.47
LSM8-201ENST00000249299 IGKV3D-11A0A0A0MRZ8 115 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 SPAARA0A1B0GVQ0 90 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 FAM227AF5H4B4 570 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 HYAL3O43820 417 aaPredicted RBP12.13□□□□□ -0.47
LSM8-201ENST00000249299 BCAS2O75934 225 aaPredicted RBP12.13□□□□□ -0.47
LSM8-201ENST00000249299 CPSF4O95639 269 aaKnown RBP12.13□□□□□ -0.47
LSM8-201ENST00000249299 NTRK1P04629 796 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 BMP2P12643 396 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 ME2P23368 584 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 FEN1P39748 380 aaKnown RBP12.13□□□□□ -0.47
LSM8-201ENST00000249299 CDKN2CP42773 168 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 STT3AP46977 705 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 NOVA1P51513 510 aaKnown RBP12.13□□□□□ -0.47
LSM8-201ENST00000249299 SLC7A2P52569 658 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 MAT1AQ00266 395 aaKnown RBP12.13□□□□□ -0.47
LSM8-201ENST00000249299 BNIP2Q12982 314 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 MRPL14Q6P1L8 145 aaKnown RBP12.13□□□□□ -0.47
LSM8-201ENST00000249299 ZCCHC12Q6PEW1 402 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 COX15Q7KZN9 410 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 GPR155Q7Z3F1 870 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 NET1Q7Z628 596 aaPredicted RBP12.13□□□□□ -0.47
LSM8-201ENST00000249299 C10orf67Q8IYJ2 551 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 ULK2Q8IYT8 1036 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 CCDC116Q8IYX3 515 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 TMEM52Q8NDY8 209 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 OR52N2Q8NGI0 321 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 MIPOL1Q8TD10 442 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 NACC2Q96BF6 587 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 CTHRC1Q96CG8 243 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 ELP4Q96EB1 424 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 ECSITQ9BQ95 431 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 SLC35A5Q9BS91 424 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 THUMPD3Q9BV44 507 aaKnown RBP12.13□□□□□ -0.47
LSM8-201ENST00000249299 TRIM4Q9C037 500 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 EPS8L2Q9H6S3 715 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 IL1RL2Q9HB29 575 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 SIRT3Q9NTG7 399 aaPredicted RBP12.13□□□□□ -0.47
LSM8-201ENST00000249299 C5AR2Q9P296 337 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 SUCOQ9UBS9 1254 aaKnown RBP12.13□□□□□ -0.47
LSM8-201ENST00000249299 ZNF451Q9Y4E5 1061 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 B3GALT1Q9Y5Z6 326 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 MAU2Q9Y6X3 613 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 COL27A1Q8IZC6 1860 aaPredicted RBP12.13□□□□□ -0.47
LSM8-201ENST00000249299 ADAMTS20P59510 1910 aa12.13□□□□□ -0.47
LSM8-201ENST00000249299 TCRBV16S1A1N1A0A5B0 115 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 TTC36A6NLP5 189 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 WASHC1A8K0Z3 465 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 C9J4A7 227 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms