RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 TRAM1L1Q8N609 369 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 OR52P1PQ8NH57 321 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 FEVQ99581 238 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 C16orf70Q9BSU1 422 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 RANBP3Q9H6Z4 567 aaPredicted RBP12.8□□□□□ -0.36
NEK4-201ENST00000233027 IL21RQ9HBE5 538 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 SRA1Q9HD15 236 aaKnown RBP12.8□□□□□ -0.36
NEK4-201ENST00000233027 ATXN7L1Q9ULK2 861 aaPredicted RBP12.8□□□□□ -0.36
NEK4-201ENST00000233027 SSX5O60225 188 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 CAPN15O75808 1086 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 OR2B3O76000 313 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 HERV-K104P61576 105 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 KBTBD6Q86V97 674 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 RPLP0P6Q8NHW5 317 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 OR10A4Q9H209 315 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 VRTNQ9H8Y1 702 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 ZBTB20Q9HC78 741 aaPredicted RBP12.8□□□□□ -0.36
NEK4-201ENST00000233027 ZNF701Q9NV72 531 aaPredicted RBP12.8□□□□□ -0.36
NEK4-201ENST00000233027 C10orf71Q711Q0 1435 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 CAPN14A8MX76 684 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 SLC16A5O15375 505 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 RFPL2O75678 378 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 RBBP9O75884 186 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 MAS1P04201 325 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 ANXA3P12429 323 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 CD68P34810 354 aaPredicted RBP12.8□□□□□ -0.36
NEK4-201ENST00000233027 PLEKHG7Q6ZR37 379 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 C15orf39Q6ZRI6 1047 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 TMEM156Q8N614 296 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 ZNF283Q8N7M2 679 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 IRF7Q92985 503 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 FIZ1Q96SL8 496 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 ZNF717Q9BY31 904 aaPredicted RBP12.8□□□□□ -0.36
NEK4-201ENST00000233027 TLR9Q9NR96 1032 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 DKKL1Q9UK85 242 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 ZNF142P52746 1687 aaPredicted RBP12.8□□□□□ -0.36
NEK4-201ENST00000233027 WASHC1A8K0Z3 465 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 PAK4O96013 591 aaPredicted RBP12.8□□□□□ -0.36
NEK4-201ENST00000233027 PYCR1P32322 319 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 GLT8D1Q68CQ7 371 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 WASH2PQ6VEQ5 465 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 SLC22A8Q8TCC7 542 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 L3HYPDHQ96EM0 354 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 GPR62Q9BZJ7 368 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 B3GAT2Q9NPZ5 323 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 ZNF226Q9NYT6 803 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 PCTPQ9UKL6 214 aa12.8□□□□□ -0.36
NEK4-201ENST00000233027 TRBV2A0A0J9YWF9 115 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 BPNT1O95861 308 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 SOD2P04179 222 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 CAPN3P20807 821 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 FOXA1P55317 472 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 FADDQ13158 208 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 ZMYND11Q15326 602 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 CDNFQ49AH0 187 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 ZNF789Q5FWF6 425 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 GARNL3Q5VVW2 1013 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 APCDD1Q8J025 514 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 SORCS1Q8WY21 1168 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 APIPQ96GX9 242 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 PPIL3Q9H2H8 161 aaKnown RBP12.79□□□□□ -0.36
NEK4-201ENST00000233027 C11orf49Q9H6J7 331 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 PRTFDC1Q9NRG1 225 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 HRASLS2Q9NWW9 162 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 DHDHQ9UQ10 334 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 PADI2Q9Y2J8 665 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 A0A1B0GVC2 190 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 SCO2O43819 266 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 DNASE1P24855 282 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 ASPGQ86U10 573 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 ISCA2Q86U28 154 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 ZNF584Q8IVC4 421 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 OR4N5Q8IXE1 308 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 FUBP1Q96AE4 644 aaKnown RBP12.79□□□□□ -0.36
NEK4-201ENST00000233027 MRPS17Q9Y2R5 130 aaKnown RBP12.79□□□□□ -0.36
NEK4-201ENST00000233027 INSL6Q9Y581 213 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 ZNF705EA8MWA4 302 aaPredicted RBP12.79□□□□□ -0.36
NEK4-201ENST00000233027 HCRTR2O43614 444 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 FHP07954 510 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 GLP1RP43220 463 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 PAGE3Q5JUK9 113 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 EMC10Q5UCC4 262 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 FCRLBQ6BAA4 426 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 SFRP4Q6FHJ7 346 aaPredicted RBP12.79□□□□□ -0.36
NEK4-201ENST00000233027 OR56A3Q8NH54 315 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 TRIB3Q96RU7 358 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 NPLQ9BXD5 320 aaPredicted RBP12.79□□□□□ -0.36
NEK4-201ENST00000233027 OR6C74A6NCV1 312 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 EMC8O43402 210 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 CSTAP01040 98 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 T-ENOLP0DO92 83 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 CRYZQ08257 329 aaKnown RBP12.79□□□□□ -0.36
NEK4-201ENST00000233027 MAP4K2Q12851 820 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 FIGNL1Q6PIW4 674 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 TSPAN33Q86UF1 283 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 DENND6BQ8NEG7 585 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 OR13C3Q8NGS6 347 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 OR13J1Q8NGT2 312 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 ITFG2Q969R8 447 aa12.79□□□□□ -0.36
NEK4-201ENST00000233027 PTERQ96BW5 349 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms