RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 TRIM4Q9C037 500 aa11.08□□□□□ -0.64
CLN6-223ENST00000637823 PCDHAC1Q9H158 963 aa11.08□□□□□ -0.64
CLN6-223ENST00000637823 EPS8L2Q9H6S3 715 aa11.08□□□□□ -0.64
CLN6-223ENST00000637823 CXorf36Q9H7Y0 433 aa11.08□□□□□ -0.64
CLN6-223ENST00000637823 ZNF304Q9HCX3 659 aa11.08□□□□□ -0.64
CLN6-223ENST00000637823 SEMA3GQ9NS98 782 aa11.08□□□□□ -0.64
CLN6-223ENST00000637823 FAM86C1Q9NVL1 165 aa11.08□□□□□ -0.64
CLN6-223ENST00000637823 HCN3Q9P1Z3 774 aa11.08□□□□□ -0.64
CLN6-223ENST00000637823 NDOR1Q9UHB4 597 aa11.08□□□□□ -0.64
CLN6-223ENST00000637823 SNX8Q9Y5X2 465 aa11.08□□□□□ -0.64
CLN6-223ENST00000637823 A0A1B0GX78 115 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 FAM220BPB1ANY3 271 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 CLDN4O14493 209 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 CTNSO60931 367 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 ENTPD5O75356 428 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 NTRK1P04629 796 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 C8orf89P0DMQ9 161 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 FGF5P12034 268 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 CPMP14384 443 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 IL10P22301 178 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 CCKBRP32239 447 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 GPC1P35052 558 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 SOAT1P35610 550 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 CCT3P49368 545 aaKnown RBP11.07□□□□□ -0.64
CLN6-223ENST00000637823 GZMMP51124 257 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 OR4D2P58180 307 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 MC2RQ01718 297 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 FOLH1Q04609 750 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 VAC14Q08AM6 782 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 BIKQ13323 160 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 GAB1Q13480 694 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 CCNIQ14094 377 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 DSG2Q14126 1118 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 C16orf72Q14CZ0 275 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 RGNQ15493 299 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 FXNQ16595 210 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 ZNF750Q32MQ0 723 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 SPDYE7PQ495Y7 208 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 RHBDD2Q6NTF9 364 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 TMEM64Q6YI46 380 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 GPR155Q7Z3F1 870 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 B3GNT8Q7Z7M8 397 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 PIP4P1Q86T03 277 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 MICU2Q8IYU8 434 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 DTWD1Q8N5C7 304 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 TMEM52Q8NDY8 209 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 OR2T12Q8NG77 320 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 OR52N2Q8NGI0 321 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 OR51Q1Q8NH59 317 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 SUN3Q8TAQ9 357 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 SFXN5Q8TD22 340 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 JADE3Q92613 823 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 ANKRD9Q96BM1 317 aaPredicted RBP11.07□□□□□ -0.64
CLN6-223ENST00000637823 MOAP1Q96BY2 351 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 TBC1D20Q96BZ9 403 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 NEURL3Q96EH8 262 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 PEX11GQ96HA9 241 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 TRIM15Q9C019 465 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 PIF1Q9H611 641 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 C3orf14Q9HBI5 128 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 FBXO8Q9NRD0 319 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 SIRT3Q9NTG7 399 aaPredicted RBP11.07□□□□□ -0.64
CLN6-223ENST00000637823 ACTR3BQ9P1U1 418 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 GMPR2Q9P2T1 348 aaKnown RBP11.07□□□□□ -0.64
CLN6-223ENST00000637823 DHCR7Q9UBM7 475 aaKnown RBP11.07□□□□□ -0.64
CLN6-223ENST00000637823 PCDHGA1Q9Y5H4 931 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 SNX13Q9Y5W8 968 aa11.07□□□□□ -0.64
CLN6-223ENST00000637823 RNF103-CHMP3A0A140T963 221 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 ELOVL7A1L3X0 281 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 EFCAB7A8K855 629 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 GSTA4O15217 222 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 EMC8O43402 210 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 FGF17O60258 216 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 FKBP6O75344 327 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 GMNNO75496 209 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 RFPL3O75679 317 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 SLITRK5O94991 958 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 KCNK5O95279 499 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 FHP07954 510 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 IFI6P09912 130 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 FBLP22087 321 aaKnown RBP11.06□□□□□ -0.64
CLN6-223ENST00000637823 MAGEA8P43361 318 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 OR1D4P47884 311 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 CDK9P50750 372 aaKnown RBP11.06□□□□□ -0.64
CLN6-223ENST00000637823 HSD17B7P56937 341 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 MAT1AQ00266 395 aaKnown RBP11.06□□□□□ -0.64
CLN6-223ENST00000637823 DUSP2Q05923 314 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 FADDQ13158 208 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 MAP7Q14244 749 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 STPG1Q5TH74 334 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 PRAMEF17Q5VTA0 474 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 SAXO2Q658L1 398 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 CPZQ66K79 652 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 ERICH5Q6P6B1 374 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 AAGABQ6PD74 315 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 BHLHB9Q6PI77 547 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 C6orf120Q7Z4R8 191 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 PPP1R3BQ86XI6 285 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 TMEM126BQ8IUX1 230 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 OR4N5Q8IXE1 308 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms