RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 GSTT2P0CG29 244 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 ENDOUP21128 410 aaKnown RBP12.26□□□□□ -0.45
SCN8A-209ENST00000627620 ZNF84P51523 738 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 GPR143P51810 404 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 CLCA4Q14CN2 919 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 GRK1Q15835 563 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 SAMD12Q8N8I0 201 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 TMEM40Q8WWA1 233 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 NINJ1Q92982 152 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 BEX2Q9BXY8 128 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 MROQ9BYG7 248 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 SLC5A7Q9GZV3 580 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 BEX1Q9HBH7 125 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 PCP4L1A6NKN8 68 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 SLC33A1O00400 549 aaPredicted RBP12.26□□□□□ -0.45
SCN8A-209ENST00000627620 PTGESO14684 152 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 SLC19A2O60779 497 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 ADH7P40394 386 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 MECP2P51608 486 aaKnown RBP12.26□□□□□ -0.45
SCN8A-209ENST00000627620 PSMA6P60900 246 aaKnown RBP12.26□□□□□ -0.45
SCN8A-209ENST00000627620 UGT3A2Q3SY77 523 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 TMEM35AQ53FP2 167 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 NKAPLQ5M9Q1 402 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 BLOC1S3Q6QNY0 202 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 CYS1Q717R9 158 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 SSX6Q7RTT6 188 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 TSPAN33Q86UF1 283 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 TRIM43Q96BQ3 446 aaPredicted RBP12.26□□□□□ -0.45
SCN8A-209ENST00000627620 SECISBP2Q96T21 854 aaKnown RBP12.26□□□□□ -0.45
SCN8A-209ENST00000627620 ZNF471Q9BX82 626 aaPredicted RBP12.26□□□□□ -0.45
SCN8A-209ENST00000627620 RMI1Q9H9A7 625 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 WDR6Q9NNW5 1121 aaKnown RBP12.26□□□□□ -0.45
SCN8A-209ENST00000627620 HPRP00739 348 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 ADORA3P0DMS8 318 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 PORP16435 677 aaPredicted RBP12.25□□□□□ -0.45
SCN8A-209ENST00000627620 SELENOVP59797 346 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 UGT8Q16880 541 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 CARD17Q5XLA6 110 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 RAB12Q6IQ22 244 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 SLC39A5Q6ZMH5 540 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 ENDOVQ8N8Q3 282 aaKnown RBP12.25□□□□□ -0.45
SCN8A-209ENST00000627620 OR56A3Q8NH54 315 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 NEIL3Q8TAT5 605 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 OR1F2PQ96R84 312 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 PELOQ9BRX2 385 aaKnown RBP12.25□□□□□ -0.45
SCN8A-209ENST00000627620 HAPLN2Q9GZV7 340 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 MAN2B1O00754 1011 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 SCAMP2O15127 329 aaKnown RBP12.25□□□□□ -0.45
SCN8A-209ENST00000627620 SLITRK5O94991 958 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 NTSR1P30989 418 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 SUOXP51687 545 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 FXYD6P3P58550 94 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 RAB39AQ14964 217 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 HSD17B12Q53GQ0 312 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 OGFRL1Q5TC84 451 aaPredicted RBP12.25□□□□□ -0.45
SCN8A-209ENST00000627620 TMEM236Q5W0B7 351 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 OR8K5Q8NH50 307 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 MTMR10Q9NXD2 777 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 MLXQ9UH92 298 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 MEIS3P2A8K0S8 358 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 C5AR1P21730 350 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 GCGRP47871 477 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 HK3P52790 923 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 PIGFQ07326 219 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 MOGSQ13724 837 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 KANK2Q63ZY3 851 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 TMEM25Q86YD3 366 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 OR4N5Q8IXE1 308 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 CHCHD4Q8N4Q1 142 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 ZNF611Q8N823 705 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 FCAMRQ8WWV6 532 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 PPP1R14BQ96C90 147 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 EXTL2Q9UBQ6 330 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 PADI2Q9Y2J8 665 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 OR1A2Q9Y585 309 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 IRS2Q9Y4H2 1338 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 SOCS2O14508 198 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 APBB3O95704 486 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 LHCGRP22888 699 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 CLDN8P56748 225 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 ACTC1P68032 377 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 ACTA1P68133 377 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 GSTM4Q03013 218 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 LRRC69Q6ZNQ3 347 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 USP53Q70EK8 1073 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 FIBINQ8TAL6 211 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 ZNF431Q8TF32 576 aaPredicted RBP12.25□□□□□ -0.45
SCN8A-209ENST00000627620 SRA1Q9HD15 236 aaKnown RBP12.25□□□□□ -0.45
SCN8A-209ENST00000627620 TREM1Q9NP99 234 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 CA14Q9ULX7 337 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 CACNA1FO60840 1977 aa12.25□□□□□ -0.45
SCN8A-209ENST00000627620 IGKV6D-21A0A0A0MT36 114 aa12.24□□□□□ -0.45
SCN8A-209ENST00000627620 RHCEP18577 417 aa12.24□□□□□ -0.45
SCN8A-209ENST00000627620 AK4P27144 223 aaPredicted RBP12.24□□□□□ -0.45
SCN8A-209ENST00000627620 GMPRP36959 345 aa12.24□□□□□ -0.45
SCN8A-209ENST00000627620 CRISP1P54107 249 aa12.24□□□□□ -0.45
SCN8A-209ENST00000627620 CRYZQ08257 329 aaKnown RBP12.24□□□□□ -0.45
SCN8A-209ENST00000627620 NFE2L1Q14494 772 aa12.24□□□□□ -0.45
SCN8A-209ENST00000627620 C18orf21Q32NC0 220 aaPredicted RBP12.24□□□□□ -0.45
SCN8A-209ENST00000627620 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms