RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 OR2J2O76002 312 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 MYL2P10916 166 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 NEFHP12036 1026 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 SSR4P51571 173 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 PER3P56645 1201 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 MAGOHP61326 146 aaKnown RBP16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 TNFRSF17Q02223 184 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 FOLH1Q04609 750 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 CRYBG3Q68DQ2 2970 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 HSDL2Q6YN16 418 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 DGAT2L6Q6ZPD8 337 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 SULF2Q8IWU5 870 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 CYP4Z2PQ8N1L4 340 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 FAM98AQ8NCA5 519 aaKnown RBP16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 SLC2A12Q8TD20 617 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 UCN3Q969E3 161 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 GPR137Q96N19 417 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 SSU72Q9NP77 194 aaKnown RBP16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 SEMA4BQ9NPR2 832 aaPredicted RBP16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 MKS1Q9NXB0 559 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 MYOTQ9UBF9 498 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 PHF11Q9UIL8 331 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 PPT2Q9UMR5 302 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 NPIPA1Q9UND3 350 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 A0A1W2PR48 441 aa16.67■□□□□ 0.26
SCAMP4-213ENST00000621748 WWP2O00308 870 aa16.67■□□□□ 0.26
SCAMP4-213ENST00000621748 GBAP04062 536 aa16.67■□□□□ 0.26
SCAMP4-213ENST00000621748 RPS17P08708 135 aaKnown RBP16.67■□□□□ 0.26
SCAMP4-213ENST00000621748 FAM58BPP0C7Q3 252 aa16.67■□□□□ 0.26
SCAMP4-213ENST00000621748 STT3AP46977 705 aa16.67■□□□□ 0.26
SCAMP4-213ENST00000621748 HK2P52789 917 aa16.67■□□□□ 0.26
SCAMP4-213ENST00000621748 CDH13P55290 713 aa16.67■□□□□ 0.26
SCAMP4-213ENST00000621748 KRTCAP3Q53RY4 240 aa16.67■□□□□ 0.26
SCAMP4-213ENST00000621748 FAM219BQ5XKK7 198 aa16.67■□□□□ 0.26
SCAMP4-213ENST00000621748 FRG2Q64ET8 278 aa16.67■□□□□ 0.26
SCAMP4-213ENST00000621748 MILR1Q7Z6M3 343 aa16.67■□□□□ 0.26
SCAMP4-213ENST00000621748 EXOC3L1Q86VI1 746 aa16.67■□□□□ 0.26
SCAMP4-213ENST00000621748 SLC22A9Q8IVM8 553 aa16.67■□□□□ 0.26
SCAMP4-213ENST00000621748 BANPQ8N9N5 519 aa16.67■□□□□ 0.26
SCAMP4-213ENST00000621748 OR4F6Q8NGB9 312 aa16.67■□□□□ 0.26
SCAMP4-213ENST00000621748 RDH11Q8TC12 318 aa16.67■□□□□ 0.26
SCAMP4-213ENST00000621748 ZNF721Q8TF20 911 aa16.67■□□□□ 0.26
SCAMP4-213ENST00000621748 ZNF483Q8TF39 744 aaPredicted RBP16.67■□□□□ 0.26
SCAMP4-213ENST00000621748 TANKQ92844 425 aa16.67■□□□□ 0.26
SCAMP4-213ENST00000621748 PPWD1Q96BP3 646 aaKnown RBP16.67■□□□□ 0.26
SCAMP4-213ENST00000621748 SENP5Q96HI0 755 aaPredicted RBP16.67■□□□□ 0.26
SCAMP4-213ENST00000621748 ATP6V1G3Q96LB4 118 aa16.67■□□□□ 0.26
SCAMP4-213ENST00000621748 FRG2BQ96QU4 278 aa16.67■□□□□ 0.26
SCAMP4-213ENST00000621748 TMEM216Q9P0N5 145 aa16.67■□□□□ 0.26
SCAMP4-213ENST00000621748 GLOD5A6NK44 160 aa16.66■□□□□ 0.26
SCAMP4-213ENST00000621748 ZNHIT1O43257 154 aa16.66■□□□□ 0.26
SCAMP4-213ENST00000621748 ASNA1O43681 348 aa16.66■□□□□ 0.26
SCAMP4-213ENST00000621748 ZNF354AO60765 605 aaPredicted RBP16.66■□□□□ 0.26
SCAMP4-213ENST00000621748 SLC19A2O60779 497 aa16.66■□□□□ 0.26
SCAMP4-213ENST00000621748 OR6B1O95007 311 aa16.66■□□□□ 0.26
SCAMP4-213ENST00000621748 ZWINTO95229 277 aa16.66■□□□□ 0.26
SCAMP4-213ENST00000621748 TSPAN8P19075 237 aa16.66■□□□□ 0.26
SCAMP4-213ENST00000621748 TLX1P31314 330 aaPredicted RBP16.66■□□□□ 0.26
SCAMP4-213ENST00000621748 CA7P43166 264 aa16.66■□□□□ 0.26
SCAMP4-213ENST00000621748 MEOX1P50221 254 aa16.66■□□□□ 0.26
SCAMP4-213ENST00000621748 RNF4P78317 190 aa16.66■□□□□ 0.26
SCAMP4-213ENST00000621748 NOTCH2Q04721 2471 aa16.66■□□□□ 0.26
SCAMP4-213ENST00000621748 RBPJQ06330 500 aa16.66■□□□□ 0.26
SCAMP4-213ENST00000621748 TTC19Q6DKK2 380 aaPredicted RBP16.66■□□□□ 0.26
SCAMP4-213ENST00000621748 CYP20A1Q6UW02 462 aa16.66■□□□□ 0.26
SCAMP4-213ENST00000621748 OR8K3Q8NH51 312 aa16.66■□□□□ 0.26
SCAMP4-213ENST00000621748 DOK4Q8TEW6 326 aa16.66■□□□□ 0.26
SCAMP4-213ENST00000621748 DGAT2Q96PD7 388 aa16.66■□□□□ 0.26
SCAMP4-213ENST00000621748 RASL10BQ96S79 203 aa16.66■□□□□ 0.26
SCAMP4-213ENST00000621748 SERPINI1Q99574 410 aa16.66■□□□□ 0.26
SCAMP4-213ENST00000621748 C1QTNF3Q9BXJ4 246 aa16.66■□□□□ 0.26
SCAMP4-213ENST00000621748 LYARQ9NX58 379 aaKnown RBP16.66■□□□□ 0.26
SCAMP4-213ENST00000621748 SH3BGRL2Q9UJC5 107 aa16.66■□□□□ 0.26
SCAMP4-213ENST00000621748 ZNF835Q9Y2P0 537 aa16.66■□□□□ 0.26
SCAMP4-213ENST00000621748 KLF13Q9Y2Y9 288 aaPredicted RBP16.66■□□□□ 0.26
SCAMP4-213ENST00000621748 CELSR2Q9HCU4 2923 aa16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 HRKO00198 91 aa16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 CCL21O00585 134 aa16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 TM9SF1O15321 606 aa16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 PEX1O43933 1283 aa16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 GPR75O95800 540 aa16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 MLYCDO95822 493 aa16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 IGKV3-11P04433 115 aa16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 COX7A2P14406 83 aa16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 CPA3P15088 417 aa16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 ZNF24P17028 368 aa16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 ATP5F1P24539 256 aaPredicted RBP16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 RFC3P40938 356 aa16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 BUD31P41223 144 aaPredicted RBP16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 SOX3P41225 446 aa16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 GPR85P60893 370 aa16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 GGTA1PQ4G0N0 100 aa16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 SGO1Q5FBB7 561 aa16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 HHATQ5VTY9 493 aa16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 LETMD1Q6P1Q0 360 aa16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 IL20RBQ6UXL0 311 aa16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 NUDT13Q86X67 352 aa16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 C7orf57Q8NEG2 295 aa16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 PPP1R14CQ8TAE6 165 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms