RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 ADAM29Q9UKF5 820 aa23.36■■□□□ 1.33
VEGFA-229ENST00000621747 ARHGAP10A1A4S6 786 aa23.35■■□□□ 1.33
VEGFA-229ENST00000621747 GLOD5A6NK44 160 aa23.35■■□□□ 1.33
VEGFA-229ENST00000621747 PRRG2O14669 202 aa23.35■■□□□ 1.33
VEGFA-229ENST00000621747 HS6ST1O60243 411 aa23.35■■□□□ 1.33
VEGFA-229ENST00000621747 GBAP04062 536 aa23.35■■□□□ 1.33
VEGFA-229ENST00000621747 SBK3P0C264 359 aa23.35■■□□□ 1.33
VEGFA-229ENST00000621747 PTGER1P34995 402 aa23.35■■□□□ 1.33
VEGFA-229ENST00000621747 SMSP52788 366 aa23.35■■□□□ 1.33
VEGFA-229ENST00000621747 SPRED3Q2MJR0 410 aa23.35■■□□□ 1.33
VEGFA-229ENST00000621747 OR52E8Q6IFG1 317 aa23.35■■□□□ 1.33
VEGFA-229ENST00000621747 RPS27LQ71UM5 84 aaKnown RBP23.35■■□□□ 1.33
VEGFA-229ENST00000621747 EID3Q8N140 333 aa23.35■■□□□ 1.33
VEGFA-229ENST00000621747 TMEM151AQ8N4L1 468 aa23.35■■□□□ 1.33
VEGFA-229ENST00000621747 GOLM1Q8NBJ4 401 aa23.35■■□□□ 1.33
VEGFA-229ENST00000621747 CNPPD1Q9BV87 410 aa23.35■■□□□ 1.33
VEGFA-229ENST00000621747 FETUBQ9UGM5 382 aa23.35■■□□□ 1.33
VEGFA-229ENST00000621747 SNX6Q9UNH7 406 aa23.35■■□□□ 1.33
VEGFA-229ENST00000621747 ENTPD4Q9Y227 616 aa23.35■■□□□ 1.33
VEGFA-229ENST00000621747 KLF2Q9Y5W3 355 aaPredicted RBP23.35■■□□□ 1.33
VEGFA-229ENST00000621747 DIDO1Q9BTC0 2240 aaKnown RBP23.35■■□□□ 1.33
VEGFA-229ENST00000621747 NAV2Q8IVL1 2488 aa23.34■■□□□ 1.33
VEGFA-229ENST00000621747 GALNSP34059 522 aa23.34■■□□□ 1.33
VEGFA-229ENST00000621747 CDH13P55290 713 aa23.34■■□□□ 1.33
VEGFA-229ENST00000621747 ASPHQ12797 758 aa23.34■■□□□ 1.33
VEGFA-229ENST00000621747 SGO1Q5FBB7 561 aa23.34■■□□□ 1.33
VEGFA-229ENST00000621747 PIGGQ5H8A4 983 aa23.34■■□□□ 1.33
VEGFA-229ENST00000621747 XKRXQ6PP77 449 aa23.34■■□□□ 1.33
VEGFA-229ENST00000621747 DGAT2L6Q6ZPD8 337 aa23.34■■□□□ 1.33
VEGFA-229ENST00000621747 C9orf40Q8IXQ3 194 aa23.34■■□□□ 1.33
VEGFA-229ENST00000621747 OR2M7Q8NG81 312 aa23.34■■□□□ 1.33
VEGFA-229ENST00000621747 SLC22A8Q8TCC7 542 aa23.34■■□□□ 1.33
VEGFA-229ENST00000621747 RIT1Q92963 219 aa23.34■■□□□ 1.33
VEGFA-229ENST00000621747 DEPPQ9NTK1 212 aa23.34■■□□□ 1.33
VEGFA-229ENST00000621747 PSMC3IPQ9P2W1 217 aaPredicted RBP23.34■■□□□ 1.33
VEGFA-229ENST00000621747 MEMO1Q9Y316 297 aa23.34■■□□□ 1.33
VEGFA-229ENST00000621747 ACOT7O00154 380 aa23.33■■□□□ 1.33
VEGFA-229ENST00000621747 HRKO00198 91 aa23.33■■□□□ 1.33
VEGFA-229ENST00000621747 CDC40O60508 579 aaKnown RBP eCLIP23.33■■□□□ 1.332e-13■■□□□ 11.5
VEGFA-229ENST00000621747 KLK1P06870 262 aa23.33■■□□□ 1.33
VEGFA-229ENST00000621747 FAM153BP0C7A2 387 aa23.33■■□□□ 1.33
VEGFA-229ENST00000621747 SLC35E2P0CK97 266 aa23.33■■□□□ 1.33
VEGFA-229ENST00000621747 HERVK_113P63132 956 aa23.33■■□□□ 1.33
VEGFA-229ENST00000621747 ERVK-8P63133 956 aa23.33■■□□□ 1.33
VEGFA-229ENST00000621747 PLGLB1Q02325 96 aa23.33■■□□□ 1.33
VEGFA-229ENST00000621747 SLC29A2Q14542 456 aa23.33■■□□□ 1.33
VEGFA-229ENST00000621747 ZNF267Q14586 743 aaPredicted RBP23.33■■□□□ 1.33
VEGFA-229ENST00000621747 ZNF750Q32MQ0 723 aa23.33■■□□□ 1.33
VEGFA-229ENST00000621747 FAM153CQ494X1 144 aa23.33■■□□□ 1.33
VEGFA-229ENST00000621747 CMPK2Q5EBM0 449 aa23.33■■□□□ 1.33
VEGFA-229ENST00000621747 LETMD1Q6P1Q0 360 aa23.33■■□□□ 1.33
VEGFA-229ENST00000621747 RNF111Q6ZNA4 994 aa23.33■■□□□ 1.33
VEGFA-229ENST00000621747 GK5Q6ZS86 529 aa23.33■■□□□ 1.33
VEGFA-229ENST00000621747 SLC29A4Q7RTT9 530 aa23.33■■□□□ 1.33
VEGFA-229ENST00000621747 CHERPQ8IWX8 916 aaKnown RBP23.33■■□□□ 1.33
VEGFA-229ENST00000621747 ACMSDQ8TDX5 336 aa23.33■■□□□ 1.33
VEGFA-229ENST00000621747 AGAP11Q8TF27 550 aa23.33■■□□□ 1.33
VEGFA-229ENST00000621747 SELENOMQ8WWX9 145 aa23.33■■□□□ 1.33
VEGFA-229ENST00000621747 ERVK-6Q9BXR3 956 aa23.33■■□□□ 1.33
VEGFA-229ENST00000621747 MRPL1Q9BYD6 325 aaKnown RBP23.33■■□□□ 1.33
VEGFA-229ENST00000621747 SACM1LQ9NTJ5 587 aa23.33■■□□□ 1.33
VEGFA-229ENST00000621747 RYDENQ9NUL5 291 aaKnown RBP23.33■■□□□ 1.33
VEGFA-229ENST00000621747 TMEM216Q9P0N5 145 aa23.33■■□□□ 1.33
VEGFA-229ENST00000621747 TRPS1Q9UHF7 1281 aa23.33■■□□□ 1.33
VEGFA-229ENST00000621747 SLC12A4Q9UP95 1085 aa23.33■■□□□ 1.33
VEGFA-229ENST00000621747 ERVK-19Q9WJR5 959 aa23.33■■□□□ 1.33
VEGFA-229ENST00000621747 TSPAN8P19075 237 aa23.32■■□□□ 1.32
VEGFA-229ENST00000621747 AGAP20933 346 aa23.32■■□□□ 1.32
VEGFA-229ENST00000621747 CNR1P21554 472 aa23.32■■□□□ 1.32
VEGFA-229ENST00000621747 PIK3R1P27986 724 aa23.32■■□□□ 1.32
VEGFA-229ENST00000621747 PTGS2P35354 604 aa23.32■■□□□ 1.32
VEGFA-229ENST00000621747 ADORA2A-AS1P86434 159 aa23.32■■□□□ 1.32
VEGFA-229ENST00000621747 CLCQ05315 142 aa23.32■■□□□ 1.32
VEGFA-229ENST00000621747 CCNYL2Q5T2Q4 361 aa23.32■■□□□ 1.32
VEGFA-229ENST00000621747 SP5Q6BEB4 398 aaPredicted RBP23.32■■□□□ 1.32
VEGFA-229ENST00000621747 RGS9BPQ6ZS82 235 aa23.32■■□□□ 1.32
VEGFA-229ENST00000621747 METTL4Q8N3J2 472 aa23.32■■□□□ 1.32
VEGFA-229ENST00000621747 SLC15A4Q8N697 577 aa23.32■■□□□ 1.32
VEGFA-229ENST00000621747 TRPC4APQ8TEL6 797 aa23.32■■□□□ 1.32
VEGFA-229ENST00000621747 FAM173AQ9BQD7 235 aa23.32■■□□□ 1.32
VEGFA-229ENST00000621747 TXLNGYQ9BZA5 131 aa23.32■■□□□ 1.32
VEGFA-229ENST00000621747 BRF2Q9HAW0 419 aa23.32■■□□□ 1.32
VEGFA-229ENST00000621747 NMRK1Q9NWW6 199 aa23.32■■□□□ 1.32
VEGFA-229ENST00000621747 TEX10Q9NXF1 929 aaPredicted RBP23.32■■□□□ 1.32
VEGFA-229ENST00000621747 A0A1B0GTH9 108 aa23.31■■□□□ 1.32
VEGFA-229ENST00000621747 A0A1B0GTL3 188 aa23.31■■□□□ 1.32
VEGFA-229ENST00000621747 OR6C76A6NM76 312 aa23.31■■□□□ 1.32
VEGFA-229ENST00000621747 WASHC1A8K0Z3 465 aa23.31■■□□□ 1.32
VEGFA-229ENST00000621747 PPP6CO00743 305 aa23.31■■□□□ 1.32
VEGFA-229ENST00000621747 PGRMC2O15173 223 aa23.31■■□□□ 1.32
VEGFA-229ENST00000621747 ZNHIT1O43257 154 aa23.31■■□□□ 1.32
VEGFA-229ENST00000621747 HNRNPRO43390 633 aaKnown RBP23.31■■□□□ 1.32
VEGFA-229ENST00000621747 ZNF354AO60765 605 aaPredicted RBP23.31■■□□□ 1.32
VEGFA-229ENST00000621747 GUCY1B2O75343 617 aa23.31■■□□□ 1.32
VEGFA-229ENST00000621747 SUPT7LO94864 414 aa23.31■■□□□ 1.32
VEGFA-229ENST00000621747 PDYNP01213 254 aa23.31■■□□□ 1.32
VEGFA-229ENST00000621747 P04436 131 aa23.31■■□□□ 1.32
VEGFA-229ENST00000621747 HSD17B3P37058 310 aa23.31■■□□□ 1.32
VEGFA-229ENST00000621747 PPIAP62937 165 aaKnown RBP23.31■■□□□ 1.32
VEGFA-229ENST00000621747 NDUFAF5Q5TEU4 345 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms