RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.77■□□□□ 0.123e-8■□□□□ 10.7
CSNK1E-215ENST00000612795 GALNT8Q9NY28 637 aa15.77■□□□□ 0.12
CSNK1E-215ENST00000612795 JKAMPQ9P055 326 aa15.77■□□□□ 0.12
CSNK1E-215ENST00000612795 SLC6A5Q9Y345 797 aa15.77■□□□□ 0.12
CSNK1E-215ENST00000612795 MED12LQ86YW9 2145 aa15.77■□□□□ 0.11
CSNK1E-215ENST00000612795 TRIM64A6NGJ6 449 aa15.76■□□□□ 0.11
CSNK1E-215ENST00000612795 TRIM64BA6NI03 449 aa15.76■□□□□ 0.11
CSNK1E-215ENST00000612795 C1QAP02745 245 aa15.76■□□□□ 0.11
CSNK1E-215ENST00000612795 FBXO45P0C2W1 286 aa15.76■□□□□ 0.11
CSNK1E-215ENST00000612795 TMIGD3P0DMS9 266 aaPredicted RBP15.76■□□□□ 0.11
CSNK1E-215ENST00000612795 KCNC1P48547 511 aa15.76■□□□□ 0.11
CSNK1E-215ENST00000612795 MASP1P48740 699 aa15.76■□□□□ 0.11
CSNK1E-215ENST00000612795 HNMTP50135 292 aa15.76■□□□□ 0.11
CSNK1E-215ENST00000612795 TOMM20Q15388 145 aa15.76■□□□□ 0.11
CSNK1E-215ENST00000612795 PRSS57Q6UWY2 283 aa15.76■□□□□ 0.11
CSNK1E-215ENST00000612795 SYDE1Q6ZW31 735 aaPredicted RBP15.76■□□□□ 0.11
CSNK1E-215ENST00000612795 SLC29A4Q7RTT9 530 aa15.76■□□□□ 0.11
CSNK1E-215ENST00000612795 C7orf57Q8NEG2 295 aa15.76■□□□□ 0.11
CSNK1E-215ENST00000612795 DIO2Q92813 273 aa15.76■□□□□ 0.11
CSNK1E-215ENST00000612795 PERPQ96FX8 193 aa15.76■□□□□ 0.11
CSNK1E-215ENST00000612795 SENP5Q96HI0 755 aaPredicted RBP15.76■□□□□ 0.11
CSNK1E-215ENST00000612795 KCNC2Q96PR1 638 aa15.76■□□□□ 0.11
CSNK1E-215ENST00000612795 MAPKAP1Q9BPZ7 522 aa15.76■□□□□ 0.11
CSNK1E-215ENST00000612795 NT5DC2Q9H857 520 aa15.76■□□□□ 0.11
CSNK1E-215ENST00000612795 SLC17A6Q9P2U8 582 aa15.76■□□□□ 0.11
CSNK1E-215ENST00000612795 TRPS1Q9UHF7 1281 aa15.76■□□□□ 0.11
CSNK1E-215ENST00000612795 ADAM21Q9UKJ8 722 aa15.76■□□□□ 0.11
CSNK1E-215ENST00000612795 CNOT11Q9UKZ1 510 aaKnown RBP15.76■□□□□ 0.11
CSNK1E-215ENST00000612795 ATRQ13535 2644 aa15.75■□□□□ 0.11
CSNK1E-215ENST00000612795 CDC7O00311 574 aa15.75■□□□□ 0.11
CSNK1E-215ENST00000612795 TBX6O95947 436 aaPredicted RBP15.75■□□□□ 0.11
CSNK1E-215ENST00000612795 IGKV3-11P04433 115 aa15.75■□□□□ 0.11
CSNK1E-215ENST00000612795 BMP7P18075 431 aa15.75■□□□□ 0.11
CSNK1E-215ENST00000612795 GDF5P43026 501 aa15.75■□□□□ 0.11
CSNK1E-215ENST00000612795 STT3AP46977 705 aa15.75■□□□□ 0.11
CSNK1E-215ENST00000612795 CDKL1Q00532 357 aa15.75■□□□□ 0.11
CSNK1E-215ENST00000612795 PLIN5Q00G26 463 aa15.75■□□□□ 0.11
CSNK1E-215ENST00000612795 VASNQ6EMK4 673 aa15.75■□□□□ 0.11
CSNK1E-215ENST00000612795 ADNP2Q6IQ32 1131 aa15.75■□□□□ 0.11
CSNK1E-215ENST00000612795 VN1R5Q7Z5H4 357 aa15.75■□□□□ 0.11
CSNK1E-215ENST00000612795 CNTN4Q8IWV2 1026 aa15.75■□□□□ 0.11
CSNK1E-215ENST00000612795 PDLIM5Q96HC4 596 aaKnown RBP15.75■□□□□ 0.11
CSNK1E-215ENST00000612795 FBXL20Q96IG2 436 aa15.75■□□□□ 0.11
CSNK1E-215ENST00000612795 F2RL3Q96RI0 385 aa15.75■□□□□ 0.11
CSNK1E-215ENST00000612795 CCL19Q99731 98 aa15.75■□□□□ 0.11
CSNK1E-215ENST00000612795 ROGDIQ9GZN7 287 aa15.75■□□□□ 0.11
CSNK1E-215ENST00000612795 PITHD1Q9GZP4 211 aaPredicted RBP15.75■□□□□ 0.11
CSNK1E-215ENST00000612795 PPANQ9NQ55 473 aaKnown RBP15.75■□□□□ 0.11
CSNK1E-215ENST00000612795 PRDM7Q9NQW5 492 aa15.75■□□□□ 0.11
CSNK1E-215ENST00000612795 NDRG3Q9UGV2 375 aa15.75■□□□□ 0.11
CSNK1E-215ENST00000612795 CORO1CQ9ULV4 474 aaPredicted RBP15.75■□□□□ 0.11
CSNK1E-215ENST00000612795 VWA7Q9Y334 891 aa15.75■□□□□ 0.11
CSNK1E-215ENST00000612795 MED12Q93074 2177 aa15.75■□□□□ 0.11
CSNK1E-215ENST00000612795 FGF17O60258 216 aa15.74■□□□□ 0.11
CSNK1E-215ENST00000612795 TRIM3O75382 744 aaPredicted RBP15.74■□□□□ 0.11
CSNK1E-215ENST00000612795 ACSL3O95573 720 aa15.74■□□□□ 0.11
CSNK1E-215ENST00000612795 TTC4O95801 387 aa15.74■□□□□ 0.11
CSNK1E-215ENST00000612795 ZNF37AP17032 561 aaPredicted RBP15.74■□□□□ 0.11
CSNK1E-215ENST00000612795 CPN2P22792 545 aa15.74■□□□□ 0.11
CSNK1E-215ENST00000612795 CDK9P50750 372 aaKnown RBP15.74■□□□□ 0.11
CSNK1E-215ENST00000612795 NTRK2Q16620 822 aa15.74■□□□□ 0.11
CSNK1E-215ENST00000612795 C18orf21Q32NC0 220 aaPredicted RBP15.74■□□□□ 0.11
CSNK1E-215ENST00000612795 SPANXN3Q5MJ09 141 aa15.74■□□□□ 0.11
CSNK1E-215ENST00000612795 RNF111Q6ZNA4 994 aa15.74■□□□□ 0.11
CSNK1E-215ENST00000612795 OR4N5Q8IXE1 308 aa15.74■□□□□ 0.11
CSNK1E-215ENST00000612795 C9orf106Q8NAJ2 232 aa15.74■□□□□ 0.11
CSNK1E-215ENST00000612795 ANKRD9Q96BM1 317 aaPredicted RBP15.74■□□□□ 0.11
CSNK1E-215ENST00000612795 CERS2Q96G23 380 aa15.74■□□□□ 0.11
CSNK1E-215ENST00000612795 RBM18Q96H35 190 aaKnown RBP15.74■□□□□ 0.11
CSNK1E-215ENST00000612795 CAPS2Q9BXY5 557 aa15.74■□□□□ 0.11
CSNK1E-215ENST00000612795 UGT2B28Q9BY64 529 aa15.74■□□□□ 0.11
CSNK1E-215ENST00000612795 CALHM2Q9HA72 323 aa15.74■□□□□ 0.11
CSNK1E-215ENST00000612795 UBTD1Q9HAC8 227 aa15.74■□□□□ 0.11
CSNK1E-215ENST00000612795 OARD1Q9Y530 152 aa15.74■□□□□ 0.11
CSNK1E-215ENST00000612795 ZANQ9Y493 2812 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 STAB1Q9NY15 2570 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 RAI1Q7Z5J4 1906 aaPredicted RBP15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 IQANK1A0A1B0GTG1 560 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 HRKO00198 91 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 TP53I11O14683 189 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 CLGNO14967 610 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 HPNP05981 417 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 CYP4B1P13584 511 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 FPR1P21462 350 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 CXCR5P32302 372 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 CPOXP36551 454 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 SLC6A12P48065 614 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 HERVK_113P63132 956 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 ERVK-8P63133 956 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 CBLBQ13191 982 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 RPS6KA2Q15349 733 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 DCST1Q5T197 706 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 TTC27Q6P3X3 843 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 ZNF793Q6ZN11 406 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 GALNT7Q86SF2 657 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 ADAMTSL2Q86TH1 951 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 TAGAPQ8N103 731 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 NAT8LQ8N9F0 302 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 ACOT4Q8N9L9 421 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 SRFBP1Q8NEF9 429 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms