RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 SCPEP1Q9HB40 452 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 IL17RBQ9NRM6 502 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 DIP2BQ9P265 1576 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 CLUHO75153 1309 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 NCF1BA6NI72 391 aaPredicted RBP3.26□□□□□ -1.89
NEB-218ENST00000603639 NCF1CA8MVU1 366 aaPredicted RBP3.26□□□□□ -1.89
NEB-218ENST00000603639 YY2O15391 372 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 KDELR3O43731 214 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 MAFO75444 373 aaPredicted RBP3.26□□□□□ -1.89
NEB-218ENST00000603639 CRYBB1P53674 252 aaPredicted RBP3.26□□□□□ -1.89
NEB-218ENST00000603639 SLC26A5P58743 744 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 OSTM1Q86WC4 334 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 TMEM102Q8N9M5 508 aaPredicted RBP3.26□□□□□ -1.89
NEB-218ENST00000603639 DNAJC1Q96KC8 554 aaKnown RBP3.26□□□□□ -1.89
NEB-218ENST00000603639 MIXL1Q9H2W2 232 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 SIRPGQ9P1W8 387 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 DNAJC5BQ9UF47 199 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 SCN7AQ01118 1682 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 A0A1W2PPQ1 181 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 THBS3P49746 956 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 NDUFAF7Q7L592 441 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 TMED4Q7Z7H5 227 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 YIPF7Q8N8F6 280 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 ZNF548Q8NEK5 533 aaPredicted RBP3.26□□□□□ -1.89
NEB-218ENST00000603639 OR13C8Q8NGS7 320 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 AGO4Q9HCK5 861 aaKnown RBP3.26□□□□□ -1.89
NEB-218ENST00000603639 TMEM248Q9NWD8 314 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 FAM159BA6NKW6 160 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 CXCR6O00574 342 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 OR10J1P30954 320 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 H3F3AP84243 136 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 FXNQ16595 210 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 SMUG1Q53HV7 270 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 PPP1R26Q5T8A7 1209 aaPredicted RBP3.26□□□□□ -1.89
NEB-218ENST00000603639 ERMP1Q7Z2K6 904 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 KLBQ86Z14 1044 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 ZNF649Q9BS31 505 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 MED17Q9NVC6 651 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 HEBP2Q9Y5Z4 205 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 TRDV1A0A1B0GX56 115 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 CA12O43570 354 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 IGKV5-2P06315 115 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 PRDX3P30048 256 aaKnown RBP3.26□□□□□ -1.89
NEB-218ENST00000603639 COMMD6Q7Z4G1 85 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 PRRT1Q99946 306 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 KCNG2Q9UJ96 466 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 MST1RQ04912 1400 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 RPS10-NUDT3A0A1W2PQS6 291 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 CBY3A6NI87 242 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 CTDSP2O14595 271 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 C1GALT1C1LP0DN25 315 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 CSNK2A2P19784 350 aaPredicted RBP3.26□□□□□ -1.89
NEB-218ENST00000603639 CNR1P21554 472 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 RPS10P46783 165 aaKnown RBP3.26□□□□□ -1.89
NEB-218ENST00000603639 TEX30Q5JUR7 227 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 KCNIP4Q6PIL6 250 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 STT3BQ8TCJ2 826 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 EPYCQ99645 322 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 CDCA4Q9BXL8 241 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 HRH4Q9H3N8 390 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 COL22A1Q8NFW1 1626 aaPredicted RBP3.26□□□□□ -1.89
NEB-218ENST00000603639 TTC24A2A3L6 582 aaPredicted RBP3.26□□□□□ -1.89
NEB-218ENST00000603639 LCHNA4D1U4 455 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 OR2AG2A6NM03 316 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 ZNF736B4DX44 427 aaPredicted RBP3.26□□□□□ -1.89
NEB-218ENST00000603639 FANCGO15287 622 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 HBE1P02100 147 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 ALPIP09923 528 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 TPT1P13693 172 aaKnown RBP3.26□□□□□ -1.89
NEB-218ENST00000603639 PGAM2P15259 253 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 TAS2R41P59536 307 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 SIRPAP78324 504 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 CDK6Q00534 326 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 NFKB2Q00653 900 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 CTBP1Q13363 440 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 CRMP1Q14194 572 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 OXA1LQ15070 435 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 CLLU1Q5K131 121 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 ZFP82Q8N141 532 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 CPA6Q8N4T0 437 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 TMBIM1Q969X1 311 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 UHRF2Q96PU4 802 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 LDAHQ9H6V9 325 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 GREM2Q9H772 168 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 LIN28AQ9H9Z2 209 aaKnown RBP3.26□□□□□ -1.89
NEB-218ENST00000603639 FBXO6Q9NRD1 293 aaPredicted RBP3.26□□□□□ -1.89
NEB-218ENST00000603639 SMOXQ9NWM0 555 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 FAM120CQ9NX05 1096 aaKnown RBP3.26□□□□□ -1.89
NEB-218ENST00000603639 GPRC5BQ9NZH0 403 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 NDRG3Q9UGV2 375 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 SLC23A1Q9UHI7 598 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 E5RGE8 158 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 ANKRD28O15084 1053 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 FLRT2O43155 660 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 SEC14L5O43304 696 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 CSNK1EP49674 416 aaKnown RBP3.26□□□□□ -1.89
NEB-218ENST00000603639 FBXO48Q5FWF7 155 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 ADGRF1Q5T601 910 aa3.26□□□□□ -1.89
NEB-218ENST00000603639 KCTD18Q6PI47 426 aaPredicted RBP3.26□□□□□ -1.89
NEB-218ENST00000603639 SLC43A2Q8N370 569 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms