RNA–Protein interactions for RNA: ENST00000597172.5

TRIM28-208, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-208ENST00000597172 MKRN2OSH3BPM6 223 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 CYR61O00622 381 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 DSCR3O14972 297 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 PGRMC2O15173 223 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 CHST10O43529 356 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 AKAP10O43572 662 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 RDH16O75452 317 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 PRKRAO75569 313 aaKnown RBP8.88□□□□□ -0.99
TRIM28-208ENST00000597172 SCRG1O75711 98 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 IL3P08700 152 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 T-ENOLP0DO92 83 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 PRPS1L1P21108 318 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 ALAS2P22557 587 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 JAK1P23458 1154 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 ADSLP30566 484 aaPredicted RBP8.88□□□□□ -0.99
TRIM28-208ENST00000597172 OR1D4P47884 311 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 MAPK12P53778 367 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 ARSFP54793 590 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 PHC1P78364 1004 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 ZNF763Q0D2J5 394 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 UGT8Q16880 541 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 SYT16Q17RD7 645 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.88□□□□□ -0.99
TRIM28-208ENST00000597172 ZNF385CQ66K41 422 aaPredicted RBP8.88□□□□□ -0.99
TRIM28-208ENST00000597172 C18orf63Q68DL7 685 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 RHBDD2Q6NTF9 364 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 BLOC1S3Q6QNY0 202 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 GK5Q6ZS86 529 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 GPR180Q86V85 440 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 PPP1R3BQ86XI6 285 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 OR7A2PQ8NGA2 310 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 ERP27Q96DN0 273 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 MMABQ96EY8 250 aaPredicted RBP8.88□□□□□ -0.99
TRIM28-208ENST00000597172 NDC1Q9BTX1 674 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 NPLQ9BXD5 320 aaPredicted RBP8.88□□□□□ -0.99
TRIM28-208ENST00000597172 SPRY4Q9C004 299 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 DPY30Q9C005 99 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 B3GNT4Q9C0J1 378 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 AKIRIN1Q9H9L7 192 aaPredicted RBP8.88□□□□□ -0.99
TRIM28-208ENST00000597172 COPS7BQ9H9Q2 264 aaPredicted RBP8.88□□□□□ -0.99
TRIM28-208ENST00000597172 LYRM4Q9HD34 91 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 SLC22A11Q9NSA0 550 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 ARL8BQ9NVJ2 186 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 TMEM45AQ9NWC5 275 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 CCDC167Q9P0B6 97 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 AKAP7Q9P0M2 348 aaPredicted RBP8.88□□□□□ -0.99
TRIM28-208ENST00000597172 ATP6V1HQ9UI12 483 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 CES1P1Q9UKY3 287 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 WBP11Q9Y2W2 641 aaKnown RBP8.88□□□□□ -0.99
TRIM28-208ENST00000597172 PCDHB3Q9Y5E6 796 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 MAU2Q9Y6X3 613 aa8.88□□□□□ -0.99
TRIM28-208ENST00000597172 A0A088AWK7 358 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 LOC100653049A0A140TA62 436 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 FAM234BA2RU67 622 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 H0YIG0 161 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 SLC22A2O15244 555 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 PRMT3O60678 531 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 KRT34O76011 436 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 NADKO95544 446 aaPredicted RBP8.87□□□□□ -0.99
TRIM28-208ENST00000597172 AIFM1O95831 613 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 ONECUT2O95948 504 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 FURINP09958 794 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 LAMP1P11279 417 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 PIM1P11309 404 aaPredicted RBP8.87□□□□□ -0.99
TRIM28-208ENST00000597172 DRD2P14416 443 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 PCSK2P16519 638 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 ZNF10P21506 573 aaPredicted RBP8.87□□□□□ -0.99
TRIM28-208ENST00000597172 RORAP35398 523 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 GSTM5P46439 218 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 ASMTP46597 345 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 AVPR1BP47901 424 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 POLR2JP52435 117 aaKnown RBP8.87□□□□□ -0.99
TRIM28-208ENST00000597172 HNRNPFP52597 415 aaKnown RBP8.87□□□□□ -0.99
TRIM28-208ENST00000597172 DGKQP52824 942 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 WNT3P56703 355 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 STX1BP61266 288 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 MAT1AQ00266 395 aaKnown RBP8.87□□□□□ -0.99
TRIM28-208ENST00000597172 SRSF11Q05519 484 aaKnown RBP8.87□□□□□ -0.99
TRIM28-208ENST00000597172 KLC1Q07866 573 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 CDC20Q12834 499 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 PDE7AQ13946 482 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 KRT72Q14CN4 511 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 MPEG1Q2M385 716 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 ZNF385BQ569K4 471 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 NDUFAF5Q5TEU4 345 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 C1orf189Q5VU69 101 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 LCN10Q6JVE6 187 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 ANKRD26P1Q6NSI1 321 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 IKBIPQ70UQ0 350 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 COX15Q7KZN9 410 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 TMEM126BQ8IUX1 230 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 TMEM132CQ8N3T6 1108 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 TMEM52Q8NDY8 209 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 OR51Q1Q8NH59 317 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 CDC26Q8NHZ8 85 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 TESCQ96BS2 214 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 COQ8BQ96D53 544 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 MVB12AQ96EY5 273 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 GBP5Q96PP8 586 aa8.87□□□□□ -0.99
TRIM28-208ENST00000597172 TAAR9Q96RI9 348 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms