RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 CCM2LQ9NUG4 571 aaPredicted RBP12.08□□□□□ -0.48
SCAF1-202ENST00000595242 ACTR10Q9NZ32 417 aa12.08□□□□□ -0.48
SCAF1-202ENST00000595242 BCAP29Q9UHQ4 241 aa12.08□□□□□ -0.48
SCAF1-202ENST00000595242 C15orf41Q9Y2V0 281 aa12.08□□□□□ -0.48
SCAF1-202ENST00000595242 HEBP2Q9Y5Z4 205 aa12.08□□□□□ -0.48
SCAF1-202ENST00000595242 COL6A5A8TX70 2615 aa12.08□□□□□ -0.48
SCAF1-202ENST00000595242 H0Y3Z8 333 aa12.07□□□□□ -0.48
SCAF1-202ENST00000595242 UGDHO60701 494 aa12.07□□□□□ -0.48
SCAF1-202ENST00000595242 CLDN9O95484 217 aa12.07□□□□□ -0.48
SCAF1-202ENST00000595242 ANP32DO95626 131 aa12.07□□□□□ -0.48
SCAF1-202ENST00000595242 ALBP02768 609 aa12.07□□□□□ -0.48
SCAF1-202ENST00000595242 ME2P23368 584 aa12.07□□□□□ -0.48
SCAF1-202ENST00000595242 GDF5P43026 501 aa12.07□□□□□ -0.48
SCAF1-202ENST00000595242 AP2B1P63010 937 aa12.07□□□□□ -0.48
SCAF1-202ENST00000595242 PMP22Q01453 160 aa12.07□□□□□ -0.48
SCAF1-202ENST00000595242 PLOD1Q02809 727 aaPredicted RBP12.07□□□□□ -0.48
SCAF1-202ENST00000595242 MAD2L1Q13257 205 aaPredicted RBP12.07□□□□□ -0.48
SCAF1-202ENST00000595242 E2F2Q14209 437 aa12.07□□□□□ -0.48
SCAF1-202ENST00000595242 SLC5A12Q1EHB4 618 aa12.07□□□□□ -0.48
SCAF1-202ENST00000595242 SYTL3Q4VX76 610 aa12.07□□□□□ -0.48
SCAF1-202ENST00000595242 TCHHL1Q5QJ38 904 aaPredicted RBP12.07□□□□□ -0.48
SCAF1-202ENST00000595242 PRMT9Q6P2P2 845 aa12.07□□□□□ -0.48
SCAF1-202ENST00000595242 SPESP1Q6UW49 350 aa12.07□□□□□ -0.48
SCAF1-202ENST00000595242 MBOAT1Q6ZNC8 495 aa12.07□□□□□ -0.48
SCAF1-202ENST00000595242 Q71RC1 249 aaPredicted RBP12.07□□□□□ -0.48
SCAF1-202ENST00000595242 AMIGO1Q86WK6 493 aa12.07□□□□□ -0.48
SCAF1-202ENST00000595242 SPPL2CQ8IUH8 684 aa12.07□□□□□ -0.48
SCAF1-202ENST00000595242 KBTBD2Q8IY47 623 aa12.07□□□□□ -0.48
SCAF1-202ENST00000595242 ATL1Q8WXF7 558 aa12.07□□□□□ -0.48
SCAF1-202ENST00000595242 PSMF1Q92530 271 aa12.07□□□□□ -0.48
SCAF1-202ENST00000595242 CDRT15Q96T59 188 aa12.07□□□□□ -0.48
SCAF1-202ENST00000595242 MESP1Q9BRJ9 268 aa12.07□□□□□ -0.48
SCAF1-202ENST00000595242 S100A14Q9HCY8 104 aa12.07□□□□□ -0.48
SCAF1-202ENST00000595242 DNAJC11Q9NVH1 559 aa12.07□□□□□ -0.48
SCAF1-202ENST00000595242 ABCD2Q9UBJ2 740 aa12.07□□□□□ -0.48
SCAF1-202ENST00000595242 ZNF835Q9Y2P0 537 aa12.07□□□□□ -0.48
SCAF1-202ENST00000595242 MRPS2Q9Y399 296 aaKnown RBP12.07□□□□□ -0.48
SCAF1-202ENST00000595242 FN1P02751 2386 aaKnown RBP12.07□□□□□ -0.48
SCAF1-202ENST00000595242 A0A1W2PP18 115 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 FAM234BA2RU67 622 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 PABPN1LA6NDY0 278 aaKnown RBP12.06□□□□□ -0.48
SCAF1-202ENST00000595242 ARHGEF33A8MVX0 844 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 IFRD1O00458 451 aaPredicted RBP12.06□□□□□ -0.48
SCAF1-202ENST00000595242 MANBAO00462 879 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 ACOT8O14734 319 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 ANKRD28O15084 1053 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 RGS14O43566 566 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 PRAMEF2O60811 474 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 EEDO75530 441 aaKnown RBP12.06□□□□□ -0.48
SCAF1-202ENST00000595242 BCAS2O75934 225 aaPredicted RBP12.06□□□□□ -0.48
SCAF1-202ENST00000595242 HPP00738 406 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 CATP04040 527 aaKnown RBP12.06□□□□□ -0.48
SCAF1-202ENST00000595242 PIM1P11309 404 aaPredicted RBP12.06□□□□□ -0.48
SCAF1-202ENST00000595242 ANPEPP15144 967 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 ACPPP15309 386 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 IGFBP2P18065 325 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 SOX11P35716 441 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 VHLP40337 213 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 PTDSS1P48651 473 aaKnown RBP12.06□□□□□ -0.48
SCAF1-202ENST00000595242 DIO3P55073 304 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 ABRAXAS2Q15018 415 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 MMEL1Q495T6 779 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.06□□□□□ -0.48
SCAF1-202ENST00000595242 Q6ZPB1 254 aaPredicted RBP12.06□□□□□ -0.48
SCAF1-202ENST00000595242 TTLL10Q6ZVT0 673 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 TRIM73Q86UV7 250 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 RETREG3Q86VR2 466 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 CFAP206Q8IYR0 622 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 ADGRF3Q8IZF5 1079 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 SIRT6Q8N6T7 355 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 OR52E1Q8NGJ3 308 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 HM13Q8TCT9 377 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 BRIX1Q8TDN6 353 aaKnown RBP12.06□□□□□ -0.48
SCAF1-202ENST00000595242 NINJ1Q92982 152 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 SDCCAG3Q96C92 435 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 ASB9Q96DX5 294 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 CCDC138Q96M89 665 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 HOPXQ9BPY8 73 aaPredicted RBP12.06□□□□□ -0.48
SCAF1-202ENST00000595242 ZNF559Q9BR84 538 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 CHRNA10Q9GZZ6 450 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 SLC26A1Q9H2B4 701 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 SPAG4Q9NPE6 437 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 TMEM181Q9P2C4 612 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 CD300AQ9UGN4 299 aa12.06□□□□□ -0.48
SCAF1-202ENST00000595242 PHF3Q92576 2039 aaKnown RBP12.05□□□□□ -0.48
SCAF1-202ENST00000595242 KLHL33A6NCF5 533 aa12.05□□□□□ -0.48
SCAF1-202ENST00000595242 FXYD1O00168 92 aa12.05□□□□□ -0.48
SCAF1-202ENST00000595242 NR5A2O00482 541 aa12.05□□□□□ -0.48
SCAF1-202ENST00000595242 WDPCPO95876 746 aa12.05□□□□□ -0.48
SCAF1-202ENST00000595242 ONECUT2O95948 504 aa12.05□□□□□ -0.48
SCAF1-202ENST00000595242 NPPAP01160 153 aa12.05□□□□□ -0.48
SCAF1-202ENST00000595242 KRT6AP02538 564 aa12.05□□□□□ -0.48
SCAF1-202ENST00000595242 KRT6BP04259 564 aa12.05□□□□□ -0.48
SCAF1-202ENST00000595242 JAK1P23458 1154 aa12.05□□□□□ -0.48
SCAF1-202ENST00000595242 KRT6CP48668 564 aa12.05□□□□□ -0.48
SCAF1-202ENST00000595242 FOLH1Q04609 750 aa12.05□□□□□ -0.48
SCAF1-202ENST00000595242 TRAP1Q12931 704 aaKnown RBP12.05□□□□□ -0.48
SCAF1-202ENST00000595242 RPS6KA2Q15349 733 aa12.05□□□□□ -0.48
SCAF1-202ENST00000595242 LRRC74BQ6ZQY2 392 aa12.05□□□□□ -0.48
SCAF1-202ENST00000595242 COX15Q7KZN9 410 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms