RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 TEX10Q9NXF1 929 aaPredicted RBP14.04□□□□□ -0.16
TRIM28-205ENST00000595028 AHSPQ9NZD4 102 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 COPS7AQ9UBW8 275 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 ADAM29Q9UKF5 820 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 SLC12A4Q9UP95 1085 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 STK38LQ9Y2H1 464 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 WIPF3A6NGB9 483 aa14.03□□□□□ -0.16
TRIM28-205ENST00000595028 GLOD5A6NK44 160 aa14.03□□□□□ -0.16
TRIM28-205ENST00000595028 G3V2L1 256 aa14.03□□□□□ -0.16
TRIM28-205ENST00000595028 MLYCDO95822 493 aa14.03□□□□□ -0.16
TRIM28-205ENST00000595028 KRT6AP02538 564 aa14.03□□□□□ -0.16
TRIM28-205ENST00000595028 PROCP04070 461 aa14.03□□□□□ -0.16
TRIM28-205ENST00000595028 KRT6BP04259 564 aa14.03□□□□□ -0.16
TRIM28-205ENST00000595028 ALOX15P16050 662 aaPredicted RBP14.03□□□□□ -0.16
TRIM28-205ENST00000595028 KRT6CP48668 564 aa14.03□□□□□ -0.16
TRIM28-205ENST00000595028 SSR4P51571 173 aa14.03□□□□□ -0.16
TRIM28-205ENST00000595028 ZYG11AQ6WRX3 759 aa14.03□□□□□ -0.16
TRIM28-205ENST00000595028 C16orf47Q6ZP98 133 aaPredicted RBP14.03□□□□□ -0.16
TRIM28-205ENST00000595028 COMMD6Q7Z4G1 85 aa14.03□□□□□ -0.16
TRIM28-205ENST00000595028 ST13P4Q8IZP2 240 aaPredicted RBP14.03□□□□□ -0.16
TRIM28-205ENST00000595028 CYP4Z2PQ8N1L4 340 aa14.03□□□□□ -0.16
TRIM28-205ENST00000595028 METTL4Q8N3J2 472 aa14.03□□□□□ -0.16
TRIM28-205ENST00000595028 TMEM156Q8N614 296 aa14.03□□□□□ -0.16
TRIM28-205ENST00000595028 FAM98AQ8NCA5 519 aaKnown RBP14.03□□□□□ -0.16
TRIM28-205ENST00000595028 OR8K3Q8NH51 312 aa14.03□□□□□ -0.16
TRIM28-205ENST00000595028 ZNF721Q8TF20 911 aa14.03□□□□□ -0.16
TRIM28-205ENST00000595028 TMEM125Q96AQ2 219 aa14.03□□□□□ -0.16
TRIM28-205ENST00000595028 CCDC126Q96EE4 140 aa14.03□□□□□ -0.16
TRIM28-205ENST00000595028 HBEGFQ99075 208 aa14.03□□□□□ -0.16
TRIM28-205ENST00000595028 PELOQ9BRX2 385 aaKnown RBP14.03□□□□□ -0.16
TRIM28-205ENST00000595028 MYOTQ9UBF9 498 aa14.03□□□□□ -0.16
TRIM28-205ENST00000595028 OSGIN2Q9Y236 505 aa14.03□□□□□ -0.16
TRIM28-205ENST00000595028 SLC5A6Q9Y289 635 aa14.03□□□□□ -0.16
TRIM28-205ENST00000595028 YARS2Q9Y2Z4 477 aaKnown RBP14.03□□□□□ -0.16
TRIM28-205ENST00000595028 ARHGAP10A1A4S6 786 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 MANBAO00462 879 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 DYRK3O43781 588 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 PLIN3O60664 434 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 OR2J2O76002 312 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 SLU7O95391 586 aaKnown RBP14.02□□□□□ -0.17
TRIM28-205ENST00000595028 GPR75O95800 540 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 LDLRP01130 860 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 IGKV3-11P04433 115 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 ENO1P06733 434 aaKnown RBP14.02□□□□□ -0.17
TRIM28-205ENST00000595028 KLK1P06870 262 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 NUDT17P0C025 328 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 MYL2P10916 166 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 HSD3B1P14060 373 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 HSD3B2P26439 372 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 CRHR1P34998 444 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 HK2P52789 917 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 PKNOX1P55347 436 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 KCNK10P57789 538 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 RNF4P78317 190 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 SRSF11Q05519 484 aaKnown RBP14.02□□□□□ -0.17
TRIM28-205ENST00000595028 GALNT1Q10472 559 aaPredicted RBP14.02□□□□□ -0.17
TRIM28-205ENST00000595028 MAPKAPK3Q16644 382 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 SPRED3Q2MJR0 410 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 CCDC153Q494R4 210 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 CCNYL2Q5T2Q4 361 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 GFRALQ6UXV0 394 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 DGAT2L6Q6ZPD8 337 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 GPALPP1Q8IXQ4 340 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 AENQ8WTP8 325 aaKnown RBP14.02□□□□□ -0.17
TRIM28-205ENST00000595028 SREK1Q8WXA9 508 aaKnown RBP14.02□□□□□ -0.17
TRIM28-205ENST00000595028 RBM18Q96H35 190 aaKnown RBP14.02□□□□□ -0.17
TRIM28-205ENST00000595028 FBXL20Q96IG2 436 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 ART5Q96L15 291 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 RASL10BQ96S79 203 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 GSTO2Q9H4Y5 243 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 SEC14L3Q9UDX4 400 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 HIVEP1P15822 2718 aa14.02□□□□□ -0.17
TRIM28-205ENST00000595028 WASHC1A8K0Z3 465 aa14.01□□□□□ -0.17
TRIM28-205ENST00000595028 HRKO00198 91 aa14.01□□□□□ -0.17
TRIM28-205ENST00000595028 WWP2O00308 870 aa14.01□□□□□ -0.17
TRIM28-205ENST00000595028 COPEO14579 308 aa14.01□□□□□ -0.17
TRIM28-205ENST00000595028 OR10H2O60403 315 aa14.01□□□□□ -0.17
TRIM28-205ENST00000595028 UNC5CO95185 931 aa14.01□□□□□ -0.17
TRIM28-205ENST00000595028 ESRRBO95718 433 aa14.01□□□□□ -0.17
TRIM28-205ENST00000595028 STSP08842 583 aa14.01□□□□□ -0.17
TRIM28-205ENST00000595028 ZNF24P17028 368 aa14.01□□□□□ -0.17
TRIM28-205ENST00000595028 GRNP28799 593 aaKnown RBP14.01□□□□□ -0.17
TRIM28-205ENST00000595028 HMOX2P30519 316 aa14.01□□□□□ -0.17
TRIM28-205ENST00000595028 CCT5P48643 541 aa14.01□□□□□ -0.17
TRIM28-205ENST00000595028 HTR6P50406 440 aa14.01□□□□□ -0.17
TRIM28-205ENST00000595028 MAPK12P53778 367 aa14.01□□□□□ -0.17
TRIM28-205ENST00000595028 TBL3Q12788 808 aaKnown RBP14.01□□□□□ -0.17
TRIM28-205ENST00000595028 CSTF3Q12996 717 aaKnown RBP14.01□□□□□ -0.17
TRIM28-205ENST00000595028 NDUFAF5Q5TEU4 345 aa14.01□□□□□ -0.17
TRIM28-205ENST00000595028 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.01□□□□□ -0.17
TRIM28-205ENST00000595028 C9orf40Q8IXQ3 194 aa14.01□□□□□ -0.17
TRIM28-205ENST00000595028 C4orf33Q8N1A6 199 aa14.01□□□□□ -0.17
TRIM28-205ENST00000595028 RIBC1Q8N443 379 aaPredicted RBP14.01□□□□□ -0.17
TRIM28-205ENST00000595028 CPSF7Q8N684 471 aaKnown RBP14.01□□□□□ -0.17
TRIM28-205ENST00000595028 OR5L2Q8NGL0 311 aa14.01□□□□□ -0.17
TRIM28-205ENST00000595028 OR2W6PQ8NHA6 318 aa14.01□□□□□ -0.17
TRIM28-205ENST00000595028 RDH11Q8TC12 318 aa14.01□□□□□ -0.17
TRIM28-205ENST00000595028 METTL6Q8TCB7 284 aa14.01□□□□□ -0.17
TRIM28-205ENST00000595028 AGAP11Q8TF27 550 aa14.01□□□□□ -0.17
TRIM28-205ENST00000595028 ASB15Q8WXK1 588 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms