RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 LANCL3Q6ZV70 420 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 CPEB2Q7Z5Q1 589 aaKnown RBP12.77□□□□□ -0.37
VMP1-210ENST00000589823 RIMKLAQ8IXN7 391 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 KRTCAP2Q8N6L1 136 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 NATD1Q8N6N6 113 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 ZNF764Q96H86 408 aaPredicted RBP12.77□□□□□ -0.37
VMP1-210ENST00000589823 BBS4Q96RK4 519 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 CCT8L2Q96SF2 557 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 SDR39U1Q9NRG7 319 aaPredicted RBP12.77□□□□□ -0.37
VMP1-210ENST00000589823 PNO1Q9NRX1 252 aaKnown RBP12.77□□□□□ -0.37
VMP1-210ENST00000589823 TAS2R7Q9NYW3 318 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 ZIM2Q9NZV7 527 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 HS3ST3B1Q9Y662 390 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 COPG1Q9Y678 874 aaKnown RBP12.77□□□□□ -0.37
VMP1-210ENST00000589823 LOC102723996A0A087X1L8 192 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 A8MUA0 341 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 TGFBR3LH3BV60 316 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 SOCS6O14544 535 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 PDPK1O15530 556 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 EFSO43281 561 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 DYRK3O43781 588 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 SLC35E2P0CK97 266 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 PRKAR1AP10644 381 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 CPMP14384 443 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 TNNI3P19429 210 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 CSNK2A2P19784 350 aaPredicted RBP12.76□□□□□ -0.37
VMP1-210ENST00000589823 MPIP34949 423 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 FEN1P39748 380 aaKnown RBP12.76□□□□□ -0.37
VMP1-210ENST00000589823 STT3AP46977 705 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 MRPL19P49406 292 aaKnown RBP12.76□□□□□ -0.37
VMP1-210ENST00000589823 UCNP55089 124 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 UFM1P61960 85 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 IGLV3-21P80748 117 aaPredicted RBP12.76□□□□□ -0.37
VMP1-210ENST00000589823 SRSF11Q05519 484 aaKnown RBP12.76□□□□□ -0.37
VMP1-210ENST00000589823 EEF1A2Q05639 463 aaKnown RBP12.76□□□□□ -0.37
VMP1-210ENST00000589823 DPY19L1Q2PZI1 675 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 PGS1Q32NB8 556 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 CRTC2Q53ET0 693 aaPredicted RBP12.76□□□□□ -0.37
VMP1-210ENST00000589823 SFT2D3Q587I9 215 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 C6orf163Q5TEZ5 329 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 PPP1R32Q7Z5V6 425 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 PIGWQ7Z7B1 504 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 ST13P4Q8IZP2 240 aaPredicted RBP12.76□□□□□ -0.37
VMP1-210ENST00000589823 LRRC25Q8N386 305 aaPredicted RBP12.76□□□□□ -0.37
VMP1-210ENST00000589823 GLB1L3Q8NCI6 653 aaPredicted RBP12.76□□□□□ -0.37
VMP1-210ENST00000589823 OR7A2PQ8NGA2 310 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 THAP4Q8WY91 577 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 TESCQ96BS2 214 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 C8orf44Q96CB5 159 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 RBM18Q96H35 190 aaKnown RBP12.76□□□□□ -0.37
VMP1-210ENST00000589823 CLMPQ9H6B4 373 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 ADAP2Q9NPF8 381 aa12.76□□□□□ -0.37
VMP1-210ENST00000589823 FREM2Q5SZK8 3169 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 ANKRD28O15084 1053 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 NKX2-8O15522 239 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 WT1P19544 449 aaPredicted RBP12.75□□□□□ -0.37
VMP1-210ENST00000589823 NT5EP21589 574 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 GPX3P22352 226 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 TMPRSS3P57727 454 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 TLE3Q04726 772 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 CDC20Q12834 499 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 ELAVL1Q15717 326 aaKnown RBP12.75□□□□□ -0.37
VMP1-210ENST00000589823 ZNF750Q32MQ0 723 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 ZNF385BQ569K4 471 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 GKAP1Q5VSY0 366 aaPredicted RBP12.75□□□□□ -0.37
VMP1-210ENST00000589823 FAM180BQ6P0A1 224 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 PAPD4Q6PIY7 484 aaKnown RBP12.75□□□□□ -0.37
VMP1-210ENST00000589823 PAOXQ6QHF9 649 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 KIRREL2Q6UWL6 708 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 CAMKMTQ7Z624 323 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 MRGPREQ86SM8 312 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 CCDC116Q8IYX3 515 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 KDF1Q8NAX2 398 aaPredicted RBP12.75□□□□□ -0.37
VMP1-210ENST00000589823 OR11G2Q8NGC1 345 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 ZFP28Q8NHY6 868 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 ADAMTS17Q8TE56 1095 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 DAZLQ92904 295 aaKnown RBP12.75□□□□□ -0.37
VMP1-210ENST00000589823 PPWD1Q96BP3 646 aaKnown RBP12.75□□□□□ -0.37
VMP1-210ENST00000589823 COQ8BQ96D53 544 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 CNRIP1Q96F85 164 aaPredicted RBP12.75□□□□□ -0.37
VMP1-210ENST00000589823 ZBED6CLQ96FA7 236 aaPredicted RBP12.75□□□□□ -0.37
VMP1-210ENST00000589823 TEX37Q96LM6 180 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 ZNF681Q96N22 645 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 LPAR4Q99677 370 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 DUSP26Q9BV47 211 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 BHLHE41Q9C0J9 482 aaPredicted RBP12.75□□□□□ -0.37
VMP1-210ENST00000589823 ZNF700Q9H0M5 742 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 P4HTMQ9NXG6 502 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 SSUH2Q9Y2M2 353 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 ARL2BPQ9Y2Y0 163 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 CLDN16Q9Y5I7 305 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 CLCA3PQ9Y6N3 262 aa12.75□□□□□ -0.37
VMP1-210ENST00000589823 A0A087WV48 116 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 IGHV1-45A0A0A0MS14 117 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 NSG1A0A0A6YYJ2 146 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 IGHV3-20A0A0C4DH32 117 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 A0A1W2PS29 197 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 SAGE2PA6NJ88 616 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 MYO1GB0I1T2 1018 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 TAF4O00268 1085 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms