RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.59□□□□□ -1.51
VPS25-204ENST00000589577 LUZP2Q86TE4 346 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 DENND6AQ8IWF6 608 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.59□□□□□ -1.51
VPS25-204ENST00000589577 LIX1Q8N485 282 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.59□□□□□ -1.51
VPS25-204ENST00000589577 OR5T3Q8NGG3 340 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 MBD3L2Q8NHZ7 208 aaPredicted RBP5.59□□□□□ -1.51
VPS25-204ENST00000589577 TMEM171Q8WVE6 324 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 ASZ1Q8WWH4 475 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 SLC44A1Q8WWI5 657 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 SREK1Q8WXA9 508 aaKnown RBP5.59□□□□□ -1.51
VPS25-204ENST00000589577 KCNJ9Q92806 393 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 RERGQ96A58 199 aaPredicted RBP5.59□□□□□ -1.51
VPS25-204ENST00000589577 NTNG2Q96CW9 530 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 C1orf159Q96HA4 380 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 WFIKKN1Q96NZ8 548 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 RBBP8Q99708 897 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 ANGPTL4Q9BY76 406 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 FUT8Q9BYC5 575 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 TRIM54Q9BYV2 358 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 DEFB126Q9BYW3 111 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 ESRP2Q9H6T0 727 aaKnown RBP5.59□□□□□ -1.51
VPS25-204ENST00000589577 LDAHQ9H6V9 325 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 LIN28AQ9H9Z2 209 aaKnown RBP5.59□□□□□ -1.51
VPS25-204ENST00000589577 SH2D2AQ9NP31 389 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 KLHL28Q9NXS3 571 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 PSD3Q9NYI0 1048 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 TBK1Q9UHD2 729 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 MID2Q9UJV3 735 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 ERVK-11Q9UQG0 969 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 CRYL1Q9Y2S2 319 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 WNK1Q9H4A3 2382 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 TCRBV16S1A1N1A0A5B0 115 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 LRRC3CA6NJW4 275 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 IQCF5A8MTL0 148 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 A8MVJ9 347 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 AHRRA9YTQ3 701 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 TRIM49D1C9J1S8 452 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 EIF3FO00303 357 aaPredicted RBP5.58□□□□□ -1.52
VPS25-204ENST00000589577 TXNDC9O14530 226 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 IL18BPO95998 194 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 CCL3P10147 92 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 ENO3P13929 434 aaPredicted RBP5.58□□□□□ -1.52
VPS25-204ENST00000589577 MAOAP21397 527 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 CNR1P21554 472 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 ARNTP27540 789 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 SLCO1A2P46721 670 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 CCT5P48643 541 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 TRPC1P48995 793 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 GPR143P51810 404 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 IL2P60568 153 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 BTG2P78543 158 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 RELAQ04206 551 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 HYAL2Q12891 473 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 RASA2Q15283 850 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 NDUFA9Q16795 377 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 FAM83EQ2M2I3 478 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 TSNAXIP1Q2TAA8 658 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 TMEM249Q2WGJ8 235 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 MROH9Q5TGP6 573 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 C12orf54Q6X4T0 127 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 FRA10AC1Q70Z53 315 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 LDB1Q86U70 411 aaPredicted RBP5.58□□□□□ -1.52
VPS25-204ENST00000589577 ZC3HC1Q86WB0 502 aaKnown RBP5.58□□□□□ -1.52
VPS25-204ENST00000589577 TDRPQ86YL5 185 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 CYP4X1Q8N118 509 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 MYO1HQ8N1T3 1032 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 AGGF1Q8N302 714 aaeCLIP5.58□□□□□ -1.52
VPS25-204ENST00000589577 LRRC25Q8N386 305 aaPredicted RBP5.58□□□□□ -1.52
VPS25-204ENST00000589577 RAB42Q8N4Z0 105 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 NKAPQ8N5F7 415 aaKnown RBP5.58□□□□□ -1.52
VPS25-204ENST00000589577 C9orf106Q8NAJ2 232 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 SGMS2Q8NHU3 365 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 NEIL3Q8TAT5 605 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 ZCCHC10Q8TBK6 192 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 MAGEC3Q8TD91 643 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 ACMSDQ8TDX5 336 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 LPGAT1Q92604 370 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 RAD51AP1Q96B01 352 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 ALKBH8Q96BT7 664 aaKnown RBP5.58□□□□□ -1.52
VPS25-204ENST00000589577 HSPBAP1Q96EW2 488 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 SCYL1Q96KG9 808 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 OR1F2PQ96R84 312 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 RASL10BQ96S79 203 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 KCNK17Q96T54 332 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 GPR22Q99680 433 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 TXLNGYQ9BZA5 131 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 PRDM14Q9GZV8 571 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 CXorf56Q9H5V9 222 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 EXO5Q9H790 373 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 POPDC3Q9HBV1 291 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 MRPS30Q9NP92 439 aaKnown RBP5.58□□□□□ -1.52
VPS25-204ENST00000589577 HPF1Q9NWY4 346 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 MARCH4Q9P2E8 410 aaPredicted RBP5.58□□□□□ -1.52
VPS25-204ENST00000589577 KLHL42Q9P2K6 505 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 LPAR3Q9UBY5 353 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 YARS2Q9Y2Z4 477 aaKnown RBP5.58□□□□□ -1.52
VPS25-204ENST00000589577 VWA7Q9Y334 891 aa5.58□□□□□ -1.52
VPS25-204ENST00000589577 ATG4BQ9Y4P1 393 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms