RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 ARHGDIAP52565 204 aa21.03■□□□□ 0.96
CIRBP-208ENST00000586548 SNRPNP63162 240 aaKnown RBP21.03■□□□□ 0.96
CIRBP-208ENST00000586548 PPP1R8Q12972 351 aaKnown RBP21.03■□□□□ 0.96
CIRBP-208ENST00000586548 ZNF438Q7Z4V0 828 aa21.03■□□□□ 0.96
CIRBP-208ENST00000586548 SLC38A5Q8WUX1 472 aa21.03■□□□□ 0.96
CIRBP-208ENST00000586548 DNASE2BQ8WZ79 361 aa21.03■□□□□ 0.96
CIRBP-208ENST00000586548 C10orf90Q96M02 699 aa21.03■□□□□ 0.96
CIRBP-208ENST00000586548 ZNF681Q96N22 645 aa21.03■□□□□ 0.96
CIRBP-208ENST00000586548 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.03■□□□□ 0.96
CIRBP-208ENST00000586548 SERHL2Q9H4I8 314 aa21.03■□□□□ 0.96
CIRBP-208ENST00000586548 MS4A12Q9NXJ0 267 aa21.03■□□□□ 0.96
CIRBP-208ENST00000586548 ZNF451Q9Y4E5 1061 aa21.03■□□□□ 0.96
CIRBP-208ENST00000586548 SCN3AQ9NY46 2000 aa21.02■□□□□ 0.96
CIRBP-208ENST00000586548 AQP9O43315 295 aa21.02■□□□□ 0.96
CIRBP-208ENST00000586548 DCNP07585 359 aaKnown RBP21.02■□□□□ 0.96
CIRBP-208ENST00000586548 TFPTP0C1Z6 253 aa21.02■□□□□ 0.96
CIRBP-208ENST00000586548 LIM2P55344 173 aa21.02■□□□□ 0.96
CIRBP-208ENST00000586548 DUSP2Q05923 314 aa21.02■□□□□ 0.96
CIRBP-208ENST00000586548 C17orf82Q86X59 251 aaPredicted RBP21.02■□□□□ 0.96
CIRBP-208ENST00000586548 ARMC8Q8IUR7 673 aa21.02■□□□□ 0.96
CIRBP-208ENST00000586548 CCDC116Q8IYX3 515 aa21.02■□□□□ 0.96
CIRBP-208ENST00000586548 SAMD14Q8IZD0 417 aaPredicted RBP21.02■□□□□ 0.96
CIRBP-208ENST00000586548 METTL25Q8N6Q8 603 aa21.02■□□□□ 0.96
CIRBP-208ENST00000586548 OR56A1Q8NGH5 318 aa21.02■□□□□ 0.96
CIRBP-208ENST00000586548 SPPL2AQ8TCT8 520 aa21.02■□□□□ 0.96
CIRBP-208ENST00000586548 TMEM19Q96HH6 336 aa21.02■□□□□ 0.96
CIRBP-208ENST00000586548 MRPS26Q9BYN8 205 aaKnown RBP21.02■□□□□ 0.96
CIRBP-208ENST00000586548 REEP1Q9H902 201 aa21.02■□□□□ 0.96
CIRBP-208ENST00000586548 LYRM4Q9HD34 91 aa21.02■□□□□ 0.96
CIRBP-208ENST00000586548 DAPP1Q9UN19 280 aa21.02■□□□□ 0.96
CIRBP-208ENST00000586548 MYRFQ9Y2G1 1151 aa21.02■□□□□ 0.96
CIRBP-208ENST00000586548 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 LMO7DNF2Z398 122 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 DIRAS1O95057 198 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 H6PDO95479 791 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 EIF2S1P05198 315 aaKnown RBP21.01■□□□□ 0.95
CIRBP-208ENST00000586548 BCHEP06276 602 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 C8orf89P0DMQ9 161 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 ST6GAL1P15907 406 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 TLX1P31314 330 aaPredicted RBP21.01■□□□□ 0.95
CIRBP-208ENST00000586548 FEN1P39748 380 aaKnown RBP21.01■□□□□ 0.95
CIRBP-208ENST00000586548 KHKP50053 298 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 ANXA11P50995 505 aaKnown RBP21.01■□□□□ 0.95
CIRBP-208ENST00000586548 RUNX2Q13950 521 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 ZNF750Q32MQ0 723 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 RFX4Q33E94 735 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 SZRD1Q7Z422 152 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 TMEFF1Q8IYR6 380 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 CSNK1A1LQ8N752 337 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 ARL10Q8N8L6 244 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 C19orf47Q8N9M1 422 aaKnown RBP21.01■□□□□ 0.95
CIRBP-208ENST00000586548 GEMIN6Q8WXD5 167 aaKnown RBP21.01■□□□□ 0.95
CIRBP-208ENST00000586548 RMND5BQ96G75 393 aaPredicted RBP21.01■□□□□ 0.95
CIRBP-208ENST00000586548 TOR3AQ9H497 397 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 THSD1Q9NS62 852 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 DNAAF2Q9NVR5 837 aaKnown RBP21.01■□□□□ 0.95
CIRBP-208ENST00000586548 RAB23Q9ULC3 237 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 TMEM131Q92545 1883 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 GON4LQ3T8J9 2241 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 TMEM247A6NEH6 219 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 H3BNH8 94 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 PDE9AO76083 593 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 FHP07954 510 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 CDH3P22223 829 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 CAPZBP47756 277 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 ZIK1Q3SY52 487 aaPredicted RBP21.01■□□□□ 0.95
CIRBP-208ENST00000586548 ISLR2Q6UXK2 745 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 CEP68Q76N32 757 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 RAB8BQ92930 207 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 TRAPPC9Q96Q05 1148 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 ZNF347Q96SE7 839 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 CCDC3Q9BQI4 270 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 DUSP15Q9H1R2 295 aaPredicted RBP21.01■□□□□ 0.95
CIRBP-208ENST00000586548 OR51I1Q9H343 314 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 P2RX2Q9UBL9 471 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 C3orf18Q9UK00 162 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 MRPS2Q9Y399 296 aaKnown RBP21.01■□□□□ 0.95
CIRBP-208ENST00000586548 SAMHD1Q9Y3Z3 626 aaKnown RBP21.01■□□□□ 0.95
CIRBP-208ENST00000586548 ORC6Q9Y5N6 252 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 SLC22A7Q9Y694 548 aa21.01■□□□□ 0.95
CIRBP-208ENST00000586548 TP53BP1Q12888 1972 aaPredicted RBP21■□□□□ 0.95
CIRBP-208ENST00000586548 EMC8O43402 210 aa21■□□□□ 0.95
CIRBP-208ENST00000586548 HS6ST1O60243 411 aa21■□□□□ 0.95
CIRBP-208ENST00000586548 PROS1P07225 676 aa21■□□□□ 0.95
CIRBP-208ENST00000586548 ITGA2P17301 1181 aa21■□□□□ 0.95
CIRBP-208ENST00000586548 MATN1P21941 496 aa21■□□□□ 0.95
CIRBP-208ENST00000586548 PRKACGP22612 351 aa21■□□□□ 0.95
CIRBP-208ENST00000586548 PRR5P85299 388 aa21■□□□□ 0.95
CIRBP-208ENST00000586548 APOFQ13790 326 aa21■□□□□ 0.95
CIRBP-208ENST00000586548 TTC23Q5W5X9 447 aa21■□□□□ 0.95
CIRBP-208ENST00000586548 TSEN54Q7Z6J9 526 aaKnown RBP21■□□□□ 0.95
CIRBP-208ENST00000586548 ABCA7Q8IZY2 2146 aa21■□□□□ 0.95
CIRBP-208ENST00000586548 MAFAQ8NHW3 353 aaPredicted RBP21■□□□□ 0.95
CIRBP-208ENST00000586548 MIPOL1Q8TD10 442 aa21■□□□□ 0.95
CIRBP-208ENST00000586548 MBOAT4Q96T53 435 aa21■□□□□ 0.95
CIRBP-208ENST00000586548 EPYCQ99645 322 aa21■□□□□ 0.95
CIRBP-208ENST00000586548 SOX17Q9H6I2 414 aaPredicted RBP21■□□□□ 0.95
CIRBP-208ENST00000586548 NDUFAF4Q9P032 175 aa21■□□□□ 0.95
CIRBP-208ENST00000586548 A0A1W2PS29 197 aa20.99■□□□□ 0.95
CIRBP-208ENST00000586548 PGM3O95394 542 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms