RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 NDUFV3P56181 108 aaKnown RBP3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 CCZ1BP86790 482 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 CCZ1P86791 482 aaPredicted RBP3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 ELAVL2Q12926 359 aaKnown RBP3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 RIGQ13278 110 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 PDK1Q15118 436 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 GPAT3Q53EU6 434 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 NKAIN2Q5VXU1 208 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 FAAP20Q6NZ36 180 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 DLEU7Q6UYE1 221 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 C1orf186Q6ZWK4 172 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 RELL2Q8NC24 303 aaPredicted RBP3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 GOLGA5Q8TBA6 731 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 KIAA1524Q8TCG1 905 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 LRRC15Q8TF66 581 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 SSC4DQ8WTU2 575 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 CHPT1Q8WUD6 406 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 SLC13A3Q8WWT9 602 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 ESAMQ96AP7 390 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 ZNF689Q96CS4 500 aaPredicted RBP3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 RAB39BQ96DA2 213 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 SPXQ9BT56 116 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 CABLES2Q9BTV7 478 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 TRPV6Q9H1D0 765 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 DEPPQ9NTK1 212 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 VPS54Q9P1Q0 977 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 RPGRIP1LQ68CZ1 1315 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 TRGV8A0A0C4DH27 118 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 TRBV5-4A0A0C4DH59 114 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 A0A0J9YWU9 116 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 ZNF724A8MTY0 619 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 PDHXO00330 501 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 FBP2O00757 339 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 CHEK1O14757 476 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 FCARP24071 287 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 PPP2R1AP30153 589 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 ALDH3B1P43353 468 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 TNFRSF4P43489 277 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 MTIF2P46199 727 aaKnown RBP3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 CD300CQ08708 224 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 SLC17A1Q14916 467 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 EXOSC7Q15024 291 aaKnown RBP3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 PKN2Q16513 984 aaKnown RBP3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 CARTPTQ16568 116 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 CMPK2Q5EBM0 449 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 TEX35Q5T0J7 233 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 WDR88Q6ZMY6 472 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 Q6ZRG5 221 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 MIER3Q7Z3K6 550 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 GTSCR1Q86UQ5 136 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 ITIH5Q86UX2 942 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 CARM1Q86X55 608 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 GVQW1Q8N7I0 195 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 BANPQ8N9N5 519 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 NPRL2Q8WTW4 380 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 NABP1Q96AH0 204 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 COG3Q96JB2 828 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 RUNDC3BQ96NL0 473 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 ANKRD27Q96NW4 1050 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 RCHY1Q96PM5 261 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 TAAR6Q96RI8 345 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 STRADBQ9C0K7 418 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 SLC25A19Q9HC21 320 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 ERVK-18Q9QC07 812 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 DNPEPQ9ULA0 475 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 PRSS21Q9Y6M0 314 aa3.84□□□□□ -1.79
SMCHD1-205ENST00000581383 TDRD15B5MCY1 1934 aaKnown RBP3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 IGLV4-3A0A075B6K6 122 aa3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 MEI4A8MW99 385 aa3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 NME2P1O60361 137 aa3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 DUSP11O75319 330 aaKnown RBP3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 ALPPP05187 535 aa3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 SERPINF2P08697 491 aa3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 HIST1H2AGP0C0S8 130 aaPredicted RBP3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 ALPPL2P10696 532 aa3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 MBL2P11226 248 aaPredicted RBP3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 GAP43P17677 238 aa3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 ACADSBP45954 432 aa3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 TKTL1P51854 596 aa3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 NLRP11P59045 1033 aaKnown RBP3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 SRPXP78539 464 aa3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 CCDC40Q4G0X9 1142 aa3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 C1orf189Q5VU69 101 aa3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 LIPJQ5W064 366 aa3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 HIST2H2AA3Q6FI13 130 aa3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 OR6B2Q6IFH4 312 aa3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 CDC42EP5Q6NZY7 148 aa3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 CDHR3Q6ZTQ4 885 aa3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 BNIPLQ7Z465 357 aa3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 ZNF440Q8IYI8 595 aa3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 LINC00518Q8N0U6 118 aa3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 ZNF619Q8N2I2 560 aa3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 LEMD2Q8NC56 503 aa3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 ICA1LQ8NDH6 482 aa3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 HIST1H2ACQ93077 130 aa3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 CDHR1Q96JP9 859 aa3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 ZNF597Q96LX8 424 aa3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 SPAG8Q99932 426 aaPredicted RBP3.83□□□□□ -1.8
SMCHD1-205ENST00000581383 CHCHD5Q9BSY4 110 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms