RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 AQP7O14520 342 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 FGF17O60258 216 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 HCN1O60741 890 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 CLDN9O95484 217 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 ETHE1O95571 254 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 FREM3P0C091 2139 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 SLC35E2P0CK97 266 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 PCNAP12004 261 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 GFAPP14136 432 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 ALOX15P16050 662 aaPredicted RBP13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 IGFBP2P18065 325 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 TNNI3P19429 210 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 CHRNB4P30926 498 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 BSGP35613 385 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 GTF2H2Q13888 395 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 PFKFB4Q16877 469 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 TECRLQ5HYJ1 363 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 GTF2H2CQ6P1K8 395 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 IL20RBQ6UXL0 311 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 TAOK1Q7L7X3 1001 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 C17orf47Q8NEP4 570 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 LILRB4Q8NHJ6 448 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 TRPC4APQ8TEL6 797 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 CA5BP1Q8WTZ4 195 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 TP53INP1Q96A56 240 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 SECISBP2Q96T21 854 aaKnown RBP13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 SERPINI1Q99574 410 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 C1QTNF3Q9BXJ4 246 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 OR51B5Q9H339 312 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 WDR41Q9HAD4 459 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 SH3BGRL2Q9UJC5 107 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 ATG4BQ9Y4P1 393 aa13.41□□□□□ -0.26
SMARCE1-213ENST00000578044 AKAP9Q99996 3911 aa13.4□□□□□ -0.26
SMARCE1-213ENST00000578044 ARHGAP21Q5T5U3 1957 aa13.4□□□□□ -0.26
SMARCE1-213ENST00000578044 FOXO6A8MYZ6 492 aa13.4□□□□□ -0.26
SMARCE1-213ENST00000578044 FAM47E-STBD1D6RA91 191 aa13.4□□□□□ -0.26
SMARCE1-213ENST00000578044 WWP2O00308 870 aa13.4□□□□□ -0.26
SMARCE1-213ENST00000578044 RTCAO00442 366 aaKnown RBP13.4□□□□□ -0.26
SMARCE1-213ENST00000578044 KRT38O76015 456 aa13.4□□□□□ -0.26
SMARCE1-213ENST00000578044 PPIAP62937 165 aaKnown RBP13.4□□□□□ -0.26
SMARCE1-213ENST00000578044 FOLH1Q04609 750 aa13.4□□□□□ -0.26
SMARCE1-213ENST00000578044 TBCELQ5QJ74 424 aa13.4□□□□□ -0.26
SMARCE1-213ENST00000578044 SLC22A10Q63ZE4 541 aa13.4□□□□□ -0.26
SMARCE1-213ENST00000578044 NUDT13Q86X67 352 aa13.4□□□□□ -0.26
SMARCE1-213ENST00000578044 OR52N2Q8NGI0 321 aa13.4□□□□□ -0.26
SMARCE1-213ENST00000578044 RND1Q92730 232 aa13.4□□□□□ -0.26
SMARCE1-213ENST00000578044 EXT2Q93063 718 aa13.4□□□□□ -0.26
SMARCE1-213ENST00000578044 SPACA9Q96E40 222 aaPredicted RBP13.4□□□□□ -0.26
SMARCE1-213ENST00000578044 MTERF1Q99551 399 aaKnown RBP13.4□□□□□ -0.26
SMARCE1-213ENST00000578044 LRRC1Q9BTT6 524 aa13.4□□□□□ -0.26
SMARCE1-213ENST00000578044 TTTY12Q9BZ98 90 aa13.4□□□□□ -0.26
SMARCE1-213ENST00000578044 ACKR4Q9NPB9 350 aa13.4□□□□□ -0.26
SMARCE1-213ENST00000578044 FIGNL2A6NMB9 653 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 CAPN14A8MX76 684 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 WDR1O75083 606 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 CDH16O75309 829 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 NADKO95544 446 aaPredicted RBP13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 P04436 131 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 TPOP07202 933 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 INHBAP08476 426 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 FBXO45P0C2W1 286 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 FAM58BPP0C7Q3 252 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 NR2F6P10588 404 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 SERPINB3P29508 390 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 ST13P50502 369 aaKnown RBP13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 HNRNPH2P55795 449 aaKnown RBP13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 SLC37A1P57057 533 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 RPS13P62277 151 aaKnown RBP13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 HSF1Q00613 529 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 IRF9Q00978 393 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 EMC4Q5J8M3 183 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 FRG2Q64ET8 278 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 OR52E8Q6IFG1 317 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 LYPD8Q6UX82 237 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 TRILQ7L0X0 811 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 SLC29A4Q7RTT9 530 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 PAGE2Q7Z2X7 111 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 GOLGA7Q7Z5G4 137 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 CD163Q86VB7 1156 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 C9orf40Q8IXQ3 194 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 ZNF295-AS1Q8N0V1 137 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 MNS1Q8NEH6 495 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 FRG2BQ96QU4 278 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 MRPL57Q9BQC6 102 aaKnown RBP13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 BRF2Q9HAW0 419 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 AHSPQ9NZD4 102 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 NINJ2Q9NZG7 142 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 HIVEP1P15822 2718 aa13.39□□□□□ -0.27
SMARCE1-213ENST00000578044 EXPH5Q8NEV8 1989 aa13.38□□□□□ -0.27
SMARCE1-213ENST00000578044 IQANK1A0A1B0GTG1 560 aa13.38□□□□□ -0.27
SMARCE1-213ENST00000578044 A0A1W2PR48 441 aa13.38□□□□□ -0.27
SMARCE1-213ENST00000578044 ZNF354AO60765 605 aaPredicted RBP13.38□□□□□ -0.27
SMARCE1-213ENST00000578044 GUCY1B2O75343 617 aa13.38□□□□□ -0.27
SMARCE1-213ENST00000578044 KIR3DL1P43629 444 aa13.38□□□□□ -0.27
SMARCE1-213ENST00000578044 GPR85P60893 370 aa13.38□□□□□ -0.27
SMARCE1-213ENST00000578044 FUT7Q11130 342 aa13.38□□□□□ -0.27
SMARCE1-213ENST00000578044 SLC10A1Q14973 349 aa13.38□□□□□ -0.27
SMARCE1-213ENST00000578044 NTRK2Q16620 822 aa13.38□□□□□ -0.27
SMARCE1-213ENST00000578044 CPSF6Q16630 551 aaKnown RBP eCLIP13.38□□□□□ -0.27
SMARCE1-213ENST00000578044 GXYLT1Q4G148 440 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms