RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 TSEN15Q8WW01 171 aaKnown RBP17.09■□□□□ 0.33
ATPAF1-214ENST00000576409 NEIL2Q969S2 332 aa17.09■□□□□ 0.33
ATPAF1-214ENST00000576409 RANGRFQ9HD47 186 aaPredicted RBP17.09■□□□□ 0.33
ATPAF1-214ENST00000576409 SLX4Q8IY92 1834 aa17.09■□□□□ 0.33
ATPAF1-214ENST00000576409 CACNB4O00305 520 aaPredicted RBP17.09■□□□□ 0.33
ATPAF1-214ENST00000576409 GFRA2O00451 464 aa17.09■□□□□ 0.33
ATPAF1-214ENST00000576409 ADH1CP00326 375 aa17.09■□□□□ 0.33
ATPAF1-214ENST00000576409 SPINT3P49223 89 aa17.09■□□□□ 0.33
ATPAF1-214ENST00000576409 FNTBP49356 437 aa17.09■□□□□ 0.33
ATPAF1-214ENST00000576409 SGSHP51688 502 aa17.09■□□□□ 0.33
ATPAF1-214ENST00000576409 GP2P55259 537 aaKnown RBP17.09■□□□□ 0.33
ATPAF1-214ENST00000576409 HBA1P69905 142 aa17.09■□□□□ 0.33
ATPAF1-214ENST00000576409 MICAQ29983 383 aa17.09■□□□□ 0.33
ATPAF1-214ENST00000576409 INAVAQ3KP66 663 aa17.09■□□□□ 0.33
ATPAF1-214ENST00000576409 BCL2L15Q5TBC7 163 aa17.09■□□□□ 0.33
ATPAF1-214ENST00000576409 FRMPD2BQ6IN97 320 aa17.09■□□□□ 0.33
ATPAF1-214ENST00000576409 IFNL1Q8IU54 200 aa17.09■□□□□ 0.33
ATPAF1-214ENST00000576409 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.09■□□□□ 0.33
ATPAF1-214ENST00000576409 OR4N5Q8IXE1 308 aa17.09■□□□□ 0.33
ATPAF1-214ENST00000576409 DENND6BQ8NEG7 585 aa17.09■□□□□ 0.33
ATPAF1-214ENST00000576409 TTLL2Q9BWV7 592 aa17.09■□□□□ 0.33
ATPAF1-214ENST00000576409 MTIF3Q9H2K0 278 aaKnown RBP17.09■□□□□ 0.33
ATPAF1-214ENST00000576409 SLC35C2Q9NQQ7 365 aa17.09■□□□□ 0.33
ATPAF1-214ENST00000576409 RWDD3Q9Y3V2 267 aa17.09■□□□□ 0.33
ATPAF1-214ENST00000576409 LEFTY2O00292 366 aa17.08■□□□□ 0.33
ATPAF1-214ENST00000576409 ADAM23O75077 832 aa17.08■□□□□ 0.33
ATPAF1-214ENST00000576409 PAK4O96013 591 aaPredicted RBP17.08■□□□□ 0.33
ATPAF1-214ENST00000576409 HMGN1P05114 100 aa17.08■□□□□ 0.33
ATPAF1-214ENST00000576409 GUCA1AP43080 201 aaPredicted RBP17.08■□□□□ 0.33
ATPAF1-214ENST00000576409 ST3GAL3Q11203 375 aa17.08■□□□□ 0.33
ATPAF1-214ENST00000576409 SLC5A12Q1EHB4 618 aa17.08■□□□□ 0.33
ATPAF1-214ENST00000576409 C2orf27AQ580R0 203 aa17.08■□□□□ 0.33
ATPAF1-214ENST00000576409 PLEKHS1Q5SXH7 462 aa17.08■□□□□ 0.33
ATPAF1-214ENST00000576409 SLC25A25Q6KCM7 469 aa17.08■□□□□ 0.33
ATPAF1-214ENST00000576409 OLIG3Q7RTU3 272 aa17.08■□□□□ 0.33
ATPAF1-214ENST00000576409 OAFQ86UD1 273 aa17.08■□□□□ 0.33
ATPAF1-214ENST00000576409 SRFBP1Q8NEF9 429 aaKnown RBP17.08■□□□□ 0.33
ATPAF1-214ENST00000576409 OR5D16Q8NGK9 328 aa17.08■□□□□ 0.33
ATPAF1-214ENST00000576409 SLC39A13Q96H72 371 aa17.08■□□□□ 0.33
ATPAF1-214ENST00000576409 SLC12A9Q9BXP2 914 aa17.08■□□□□ 0.33
ATPAF1-214ENST00000576409 DPAGT1Q9H3H5 408 aa17.08■□□□□ 0.33
ATPAF1-214ENST00000576409 IL36AQ9UHA7 158 aa17.08■□□□□ 0.33
ATPAF1-214ENST00000576409 ADAMTSL3P82987 1691 aa17.08■□□□□ 0.32
ATPAF1-214ENST00000576409 TTC34A8MYJ7 566 aa17.08■□□□□ 0.32
ATPAF1-214ENST00000576409 KLKB1P03952 638 aa17.08■□□□□ 0.32
ATPAF1-214ENST00000576409 INHAP05111 366 aa17.08■□□□□ 0.32
ATPAF1-214ENST00000576409 CDK1P06493 297 aa17.08■□□□□ 0.32
ATPAF1-214ENST00000576409 AHCYP23526 432 aa17.08■□□□□ 0.32
ATPAF1-214ENST00000576409 SEC13P55735 322 aa17.08■□□□□ 0.32
ATPAF1-214ENST00000576409 KEAP1Q14145 624 aa17.08■□□□□ 0.32
ATPAF1-214ENST00000576409 TMEM179BQ7Z7N9 219 aa17.08■□□□□ 0.32
ATPAF1-214ENST00000576409 PTRH1Q86Y79 214 aaKnown RBP17.08■□□□□ 0.32
ATPAF1-214ENST00000576409 DEDD2Q8WXF8 326 aa17.08■□□□□ 0.32
ATPAF1-214ENST00000576409 TCF7L1Q9HCS4 588 aa17.08■□□□□ 0.32
ATPAF1-214ENST00000576409 ELOVL2Q9NXB9 296 aa17.08■□□□□ 0.32
ATPAF1-214ENST00000576409 ZNF69Q9UC07 566 aa17.08■□□□□ 0.32
ATPAF1-214ENST00000576409 STON1Q9Y6Q2 735 aa17.08■□□□□ 0.32
ATPAF1-214ENST00000576409 SOCS5O75159 536 aa17.08■□□□□ 0.32
ATPAF1-214ENST00000576409 STOMP27105 288 aa17.08■□□□□ 0.32
ATPAF1-214ENST00000576409 TLE2Q04725 743 aa17.08■□□□□ 0.32
ATPAF1-214ENST00000576409 CAMK1Q14012 370 aa17.08■□□□□ 0.32
ATPAF1-214ENST00000576409 PPP2R2DQ66LE6 453 aa17.08■□□□□ 0.32
ATPAF1-214ENST00000576409 WDR53Q7Z5U6 358 aaPredicted RBP17.08■□□□□ 0.32
ATPAF1-214ENST00000576409 SNAPC3Q92966 411 aa17.08■□□□□ 0.32
ATPAF1-214ENST00000576409 STOX2Q9P2F5 926 aaPredicted RBP17.08■□□□□ 0.32
ATPAF1-214ENST00000576409 WDR45Q9Y484 360 aa17.08■□□□□ 0.32
ATPAF1-214ENST00000576409 LAMB1P07942 1786 aa17.08■□□□□ 0.32
ATPAF1-214ENST00000576409 LOC102723532A0A0G2JNH3 316 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 PIM1P11309 404 aaPredicted RBP17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 HK1P19367 917 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 NAA10P41227 235 aaPredicted RBP17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 PYCR3Q53H96 274 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 PLAG1Q6DJT9 500 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 SFRP4Q6FHJ7 346 aaPredicted RBP17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 OR4E2Q8NGC2 313 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 SCRN2Q96FV2 425 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 CPPED1Q9BRF8 314 aaPredicted RBP17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 STOML2Q9UJZ1 356 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 ITGBL1O95965 494 aaPredicted RBP17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 SLC35G6P0C7Q6 338 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 PDHA2P29803 388 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 UQCRC1P31930 480 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 PPM1AP35813 382 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 TSPAN5P62079 268 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 TOR1AIP1Q5JTV8 583 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 GET4Q7L5D6 327 aaPredicted RBP17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 RBM18Q96H35 190 aaKnown RBP17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 ERMAPQ96PL5 475 aaPredicted RBP17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 SLC2A11Q9BYW1 496 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 GPN1Q9HCN4 374 aaPredicted RBP17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 PGAP2Q9UHJ9 254 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 CDH7Q9ULB5 785 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 STUB1Q9UNE7 303 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 CSNK1G3Q9Y6M4 447 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 URADA6NGE7 173 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 ZNF821O75541 412 aaPredicted RBP17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 GCGRP47871 477 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 MINDY4Q4G0A6 757 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 VITQ6UXI7 678 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 CEACAM19Q7Z692 300 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms