RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 RRASP10301 218 aa2.22□□□□□ -2.05
CHD9-209ENST00000564255 EZRP15311 586 aaKnown RBP2.22□□□□□ -2.05
CHD9-209ENST00000564255 ADRA1AP35348 466 aa2.22□□□□□ -2.05
CHD9-209ENST00000564255 ACADSBP45954 432 aa2.22□□□□□ -2.05
CHD9-209ENST00000564255 TRPC1P48995 793 aa2.22□□□□□ -2.05
CHD9-209ENST00000564255 NDST1P52848 882 aa2.22□□□□□ -2.05
CHD9-209ENST00000564255 MTTPP55157 894 aa2.22□□□□□ -2.05
CHD9-209ENST00000564255 PAX9P55771 341 aa2.22□□□□□ -2.05
CHD9-209ENST00000564255 NAAAQ02083 359 aa2.22□□□□□ -2.05
CHD9-209ENST00000564255 SLC39A4Q6P5W5 647 aa2.22□□□□□ -2.05
CHD9-209ENST00000564255 LRRC8BQ6P9F7 803 aa2.22□□□□□ -2.05
CHD9-209ENST00000564255 FIP1L1Q6UN15 594 aaKnown RBP2.22□□□□□ -2.05
CHD9-209ENST00000564255 KDELC1Q6UW63 502 aa2.22□□□□□ -2.05
CHD9-209ENST00000564255 GOLGA7Q7Z5G4 137 aa2.22□□□□□ -2.05
CHD9-209ENST00000564255 GPR142Q7Z601 462 aa2.22□□□□□ -2.05
CHD9-209ENST00000564255 GVQW1Q8N7I0 195 aa2.22□□□□□ -2.05
CHD9-209ENST00000564255 ZNF397Q8NF99 534 aaPredicted RBP2.22□□□□□ -2.05
CHD9-209ENST00000564255 MAPK15Q8TD08 544 aa2.22□□□□□ -2.05
CHD9-209ENST00000564255 SMAP2Q8WU79 429 aaPredicted RBP2.22□□□□□ -2.05
CHD9-209ENST00000564255 TMEM37Q8WXS4 190 aa2.22□□□□□ -2.05
CHD9-209ENST00000564255 PRAC1Q96KF2 57 aa2.22□□□□□ -2.05
CHD9-209ENST00000564255 WRAP53Q9BUR4 548 aaKnown RBP2.22□□□□□ -2.05
CHD9-209ENST00000564255 CARD6Q9BX69 1037 aa2.22□□□□□ -2.05
CHD9-209ENST00000564255 PINK1Q9BXM7 581 aa2.22□□□□□ -2.05
CHD9-209ENST00000564255 GDF3Q9NR23 364 aa2.22□□□□□ -2.05
CHD9-209ENST00000564255 BCAP29Q9UHQ4 241 aa2.22□□□□□ -2.05
CHD9-209ENST00000564255 ZNF490Q9ULM2 529 aaPredicted RBP2.22□□□□□ -2.05
CHD9-209ENST00000564255 FOXJ3Q9UPW0 622 aa2.22□□□□□ -2.05
CHD9-209ENST00000564255 WIPI2Q9Y4P8 454 aa2.22□□□□□ -2.05
CHD9-209ENST00000564255 NPIPB9F8W1W9 429 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 KCNAB3O43448 404 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 BUB1O43683 1085 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 TSPAN2O60636 221 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 KRT13P13646 458 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 TMOD1P28289 359 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 GPR183P32249 361 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 NME3Q13232 169 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 CLPPQ16740 277 aaPredicted RBP2.21□□□□□ -2.06
CHD9-209ENST00000564255 ZNF718Q3SXZ3 478 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 RFTN2Q52LD8 501 aaPredicted RBP2.21□□□□□ -2.06
CHD9-209ENST00000564255 TMEM41BQ5BJD5 291 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 SPATA46Q5T0L3 261 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 RHBDD2Q6NTF9 364 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 DPY19L2P2Q6ZN68 376 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 SLC26A9Q7LBE3 791 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 GCNT2Q8N0V5 402 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 TMEM178AQ8NBL3 297 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 OR2T34Q8NGX1 318 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 OR10T2Q8NGX3 314 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 OR6F1Q8NGZ6 308 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 RDH11Q8TC12 318 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 TCP11Q8WWU5 503 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 SLC5A11Q8WWX8 675 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 PNPLA2Q96AD5 504 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 SLC25A36Q96CQ1 311 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 NAP1L5Q96NT1 182 aaPredicted RBP2.21□□□□□ -2.06
CHD9-209ENST00000564255 F2RL3Q96RI0 385 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 ERP44Q9BS26 406 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 P2RX2Q9UBL9 471 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 ZNF175Q9Y473 711 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 RNF115Q9Y4L5 304 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 SYNJ2BP-COX16A0A087WUM0 186 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 SH2D1BO14796 132 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 MAPK13O15264 365 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 B4GAT1O43505 415 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 FHP07954 510 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 THRBP10828 461 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 ANOS1P23352 680 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 MATKP42679 507 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 PHEXP78562 749 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 RPL36AP83881 106 aaKnown RBP2.21□□□□□ -2.06
CHD9-209ENST00000564255 P2RY14Q15391 338 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 HAGHQ16775 308 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 FFAR4Q5NUL3 377 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 NIPAL3Q6P499 406 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 CES3Q6UWW8 571 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 Q6ZRG5 221 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 PAQR9Q6ZVX9 377 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 ZER1Q7Z7L7 766 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 VPS36Q86VN1 386 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 CATSPERDQ86XM0 798 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 CENPLQ8N0S6 344 aaPredicted RBP2.21□□□□□ -2.06
CHD9-209ENST00000564255 MLKLQ8NB16 471 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 OR6S1Q8NH40 331 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 ZNF416Q9BWM5 594 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 POLR1EQ9GZS1 481 aaKnown RBP2.21□□□□□ -2.06
CHD9-209ENST00000564255 RAB33BQ9H082 229 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 ACTR8Q9H981 624 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 YAE1D1Q9NRH1 226 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 MRPS18CQ9Y3D5 142 aaKnown RBP2.21□□□□□ -2.06
CHD9-209ENST00000564255 RNF215Q9Y6U7 377 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 PARD3Q8TEW0 1356 aa2.21□□□□□ -2.06
CHD9-209ENST00000564255 OR5H15A6NDH6 313 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 ANKRD30BLA7E2S9 258 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 A8MU76 341 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 FAM72CH0Y354 149 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 LGALS8O00214 317 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 TNFSF12O43508 249 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 MTRF1O75570 445 aaKnown RBP2.2□□□□□ -2.06
CHD9-209ENST00000564255 MFN2O95140 757 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms