RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 SLAMF7Q9NQ25 335 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 SAR1AQ9NR31 198 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 C3orf18Q9UK00 162 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 MKL2Q9ULH7 1088 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 PTRH2Q9Y3E5 179 aaKnown RBP13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 A0A087WV48 116 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 GLOD5A6NK44 160 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 SLC22A2O15244 555 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 LDB3O75112 727 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 CDC123O75794 336 aaPredicted RBP13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 ATP1B1P05026 303 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 SLC35E2P0CK97 266 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 CD1EP15812 388 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 ADSLP30566 484 aaPredicted RBP13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 FOLR3P41439 243 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 GPR143P51810 404 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 EMP2P54851 167 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 SERTAD2Q14140 314 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 RCAN2Q14206 197 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 SQLEQ14534 574 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 DPY19L1Q2PZI1 675 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 SHISA6Q6ZSJ9 500 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 R3HCC1LQ7Z5L2 792 aaKnown RBP13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 ANKRD37Q7Z713 158 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 ST13P4Q8IZP2 240 aaPredicted RBP13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 NATD1Q8N6N6 113 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 NFAM1Q8NET5 270 aaPredicted RBP13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 OR4K14Q8NGD5 310 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 SNRNP27Q8WVK2 155 aaKnown RBP13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 STARD8Q92502 1023 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 CTHRC1Q96CG8 243 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 MARK4Q96L34 752 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 PTCHD1Q96NR3 888 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 CATSPER2Q96P56 530 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 CRB3Q9BUF7 120 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 TRIM4Q9C037 500 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 BHLHE41Q9C0J9 482 aaPredicted RBP13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 GPN2Q9H9Y4 310 aaPredicted RBP13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 SLC35C2Q9NQQ7 365 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 C5AR2Q9P296 337 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 TRIM33Q9UPN9 1127 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 ERVK-11Q9UQG0 969 aa13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 MRPS18BQ9Y676 258 aaKnown RBP13.87□□□□□ -0.19
SNRPA1-207ENST00000559309 SLC22A3O75751 556 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 HEXBP07686 556 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 C8orf89P0DMQ9 161 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 LAMP1P11279 417 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 COX6A1P12074 109 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 CPMP14384 443 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 STT3AP46977 705 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 CLNS1AP54105 237 aaKnown RBP13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 SRSF11Q05519 484 aaKnown RBP13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 PCOLCEQ15113 449 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 SPRED3Q2MJR0 410 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 MINDY4Q4G0A6 757 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 FAM91A1Q658Y4 838 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 BLOC1S3Q6QNY0 202 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 KIRREL2Q6UWL6 708 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 DGAT2L6Q6ZPD8 337 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 LANCL3Q6ZV70 420 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 VASH2Q86V25 355 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 SPACA3Q8IXA5 215 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 SAMD14Q8IZD0 417 aaPredicted RBP13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 MIER2Q8N344 545 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 OR7A2PQ8NGA2 310 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 OR9I1Q8NGQ6 314 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 ZNF675Q8TD23 568 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 PTPMT1Q8WUK0 201 aaPredicted RBP13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 IMMP1LQ96LU5 166 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 YIPF2Q9BWQ6 316 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 ALOXE3Q9BYJ1 711 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 DPY30Q9C005 99 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 ZNF700Q9H0M5 742 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 ACSS1Q9NUB1 689 aaPredicted RBP13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 MRGBPQ9NV56 204 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 ZNF639Q9UID6 485 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 UTS2RQ9UKP6 389 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 PSME2Q9UL46 239 aa13.86□□□□□ -0.19
SNRPA1-207ENST00000559309 CROCCQ5TZA2 2017 aa13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 IGHV1-45A0A0A0MS14 117 aa13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 AKAP10O43572 662 aa13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 LRATO95237 230 aa13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 PORP16435 677 aaPredicted RBP13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 HOXB9P17482 250 aaPredicted RBP13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 S1PR1P21453 382 aa13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 HPCAL1P37235 193 aa13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 XKP51811 444 aa13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 TLE3Q04726 772 aa13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 ELAVL1Q15717 326 aaKnown RBP13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 NSDHLQ15738 373 aa13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 ZNF750Q32MQ0 723 aa13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 PAOXQ6QHF9 649 aa13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 MSANTD1Q6ZTZ1 278 aa13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 OR4N5Q8IXE1 308 aa13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 OR11G2Q8NGC1 345 aa13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 GOT1L1Q8NHS2 421 aaPredicted RBP13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 TSPEARQ8WU66 669 aa13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 GFM2Q969S9 779 aaKnown RBP13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 KIAA1143Q96AT1 154 aaPredicted RBP13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 PPCDCQ96CD2 204 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms