RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 DGAT2L6Q6ZPD8 337 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 LINC00696Q6ZRV3 163 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 ASB18Q6ZVZ8 466 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 PTRH1Q86Y79 214 aaKnown RBP13.39□□□□□ -0.27
USP3-205ENST00000557884 TMEM132CQ8N3T6 1108 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 OR4K14Q8NGD5 310 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 CLHC1Q8NHS4 586 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 FAM76AQ8TAV0 307 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 M1APQ8TC57 530 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 LRRC8CQ8TDW0 803 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 PTPMT1Q8WUK0 201 aaPredicted RBP13.39□□□□□ -0.27
USP3-205ENST00000557884 PSMF1Q92530 271 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 NCLNQ969V3 563 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 KLHL29Q96CT2 875 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 TUBGCP3Q96CW5 907 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 PPP3R2Q96LZ3 170 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 AGAP4Q96P64 663 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 C1orf50Q9BV19 199 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 NUF2Q9BZD4 464 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 OR8D2Q9GZM6 311 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 SLC25A18Q9H1K4 315 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 ZBTB20Q9HC78 741 aaPredicted RBP13.39□□□□□ -0.27
USP3-205ENST00000557884 MMP25Q9NPA2 562 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 PFDN4Q9NQP4 134 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 HAO1Q9UJM8 370 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 NUP210LQ5VU65 1888 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 SPENQ96T58 3664 aaKnown RBP13.38□□□□□ -0.27
USP3-205ENST00000557884 TRBV11-1A0A0K0K1C0 115 aa13.38□□□□□ -0.27
USP3-205ENST00000557884 ALPPP05187 535 aa13.38□□□□□ -0.27
USP3-205ENST00000557884 SFTPCP11686 197 aa13.38□□□□□ -0.27
USP3-205ENST00000557884 COX7A2P14406 83 aa13.38□□□□□ -0.27
USP3-205ENST00000557884 FEN1P39748 380 aaKnown RBP13.38□□□□□ -0.27
USP3-205ENST00000557884 ST13P50502 369 aaKnown RBP13.38□□□□□ -0.27
USP3-205ENST00000557884 HK2P52789 917 aa13.38□□□□□ -0.27
USP3-205ENST00000557884 AP2B1P63010 937 aa13.38□□□□□ -0.27
USP3-205ENST00000557884 OCRLQ01968 901 aa13.38□□□□□ -0.27
USP3-205ENST00000557884 NFATC3Q12968 1075 aa13.38□□□□□ -0.27
USP3-205ENST00000557884 ATP6AP1LQ52LC2 224 aa13.38□□□□□ -0.27
USP3-205ENST00000557884 HSP90B2PQ58FF3 399 aa13.38□□□□□ -0.27
USP3-205ENST00000557884 FAM71E1Q6IPT2 247 aa13.38□□□□□ -0.27
USP3-205ENST00000557884 TCTN3Q6NUS6 607 aa13.38□□□□□ -0.27
USP3-205ENST00000557884 JMJD6Q6NYC1 403 aaPredicted RBP13.38□□□□□ -0.27
USP3-205ENST00000557884 HOMEZQ8IX15 550 aa13.38□□□□□ -0.27
USP3-205ENST00000557884 ST13P4Q8IZP2 240 aaPredicted RBP13.38□□□□□ -0.27
USP3-205ENST00000557884 ZNF321PQ8N8H1 164 aa13.38□□□□□ -0.27
USP3-205ENST00000557884 FNDC5Q8NAU1 212 aa13.38□□□□□ -0.27
USP3-205ENST00000557884 B3GNT7Q8NFL0 401 aa13.38□□□□□ -0.27
USP3-205ENST00000557884 OR14A16Q8NHC5 309 aa13.38□□□□□ -0.27
USP3-205ENST00000557884 DAZLQ92904 295 aaKnown RBP13.38□□□□□ -0.27
USP3-205ENST00000557884 GFM2Q969S9 779 aaKnown RBP13.38□□□□□ -0.27
USP3-205ENST00000557884 EXOSC8Q96B26 276 aaKnown RBP13.38□□□□□ -0.27
USP3-205ENST00000557884 RBM18Q96H35 190 aaKnown RBP13.38□□□□□ -0.27
USP3-205ENST00000557884 METTL2AQ96IZ6 378 aaKnown RBP13.38□□□□□ -0.27
USP3-205ENST00000557884 EGLN2Q96KS0 407 aa13.38□□□□□ -0.27
USP3-205ENST00000557884 FCRL1Q96LA6 429 aa13.38□□□□□ -0.27
USP3-205ENST00000557884 TSSK3Q96PN8 268 aa13.38□□□□□ -0.27
USP3-205ENST00000557884 SMAD5Q99717 465 aaKnown RBP13.38□□□□□ -0.27
USP3-205ENST00000557884 CCT7Q99832 543 aa13.38□□□□□ -0.27
USP3-205ENST00000557884 MYNNQ9NPC7 610 aa13.38□□□□□ -0.27
USP3-205ENST00000557884 BAIAP2L1Q9UHR4 511 aa13.38□□□□□ -0.27
USP3-205ENST00000557884 UTS2RQ9UKP6 389 aa13.38□□□□□ -0.27
USP3-205ENST00000557884 ZNF451Q9Y4E5 1061 aa13.38□□□□□ -0.27
USP3-205ENST00000557884 SYNDIG1LA6NDD5 238 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 EIF4E1BA6NMX2 242 aaKnown RBP13.37□□□□□ -0.27
USP3-205ENST00000557884 HRKO00198 91 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 KLF11O14901 512 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 AKAP10O43572 662 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 LRATO95237 230 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 DDAH2O95865 285 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 SLC35E2P0CK97 266 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 BCKDHAP12694 445 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 CPMP14384 443 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 DRD2P14416 443 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 SDC1P18827 310 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 DUSP2Q05923 314 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 HEPACAMQ14CZ8 416 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 TERF2Q15554 542 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 CRB2Q5IJ48 1285 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 C6orf136Q5SQH8 315 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 TICAM1Q8IUC6 712 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 KIRREL3Q8IZU9 778 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 LSM14AQ8ND56 463 aaKnown RBP13.37□□□□□ -0.27
USP3-205ENST00000557884 SLC2A12Q8TD20 617 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 ELP5Q8TE02 316 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 THAP3Q8WTV1 239 aaPredicted RBP13.37□□□□□ -0.27
USP3-205ENST00000557884 RIT1Q92963 219 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 CNPPD1Q9BV87 410 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 MFRPQ9BY79 579 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 AKTIPQ9H8T0 292 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 SLCO1B3Q9NPD5 702 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 ZNF223Q9UK11 482 aaPredicted RBP13.37□□□□□ -0.27
USP3-205ENST00000557884 PSME2Q9UL46 239 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 TMED5Q9Y3A6 229 aa13.37□□□□□ -0.27
USP3-205ENST00000557884 DYRK3O43781 588 aa13.36□□□□□ -0.27
USP3-205ENST00000557884 MAN1A2O60476 641 aa13.36□□□□□ -0.27
USP3-205ENST00000557884 KLHL41O60662 606 aa13.36□□□□□ -0.27
USP3-205ENST00000557884 F10P00742 488 aa13.36□□□□□ -0.27
USP3-205ENST00000557884 PORP16435 677 aaPredicted RBP13.36□□□□□ -0.27
USP3-205ENST00000557884 DDCP20711 480 aa13.36□□□□□ -0.27
USP3-205ENST00000557884 NT5EP21589 574 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms