RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 SMC6Q96SB8 1091 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 TTTY12Q9BZ98 90 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 IL22Q9GZX6 179 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 ZDHHC11Q9H8X9 412 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 MED4Q9NPJ6 270 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 ARGLU1Q9NWB6 273 aaPredicted RBP5.43□□□□□ -1.54
VPS33B-207ENST00000557470 KCMF1Q9P0J7 381 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 STOML1Q9UBI4 398 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 GRHPRQ9UBQ7 328 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 Q9UFV3 132 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 MED16Q9Y2X0 877 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 LIPGQ9Y5X9 500 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 OR14I1A6ND48 311 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 TRIM64A6NGJ6 449 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 TRIM64BA6NI03 449 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 BTNL10A8MVZ5 291 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 F5H0A9 414 aaPredicted RBP5.42□□□□□ -1.54
VPS33B-207ENST00000557470 G3V3Y1 287 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 ACOT7O00154 380 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 BCKDKO14874 412 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 PFDN6O15212 129 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 SLC16A5O15375 505 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 NDUFS4O43181 175 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 ZBTB14O43829 449 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 PRKNO60260 465 aaPredicted RBP5.42□□□□□ -1.54
VPS33B-207ENST00000557470 GLSO94925 669 aaPredicted RBP5.42□□□□□ -1.54
VPS33B-207ENST00000557470 FTCDO95954 541 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 IGHG3P01860 377 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 INHBBP09529 407 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 ZSCAN5DPP0CG00 497 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 ZNF888P0CJ79 500 aaPredicted RBP5.42□□□□□ -1.54
VPS33B-207ENST00000557470 ALOX12P18054 663 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 OGNP20774 298 aaKnown RBP5.42□□□□□ -1.54
VPS33B-207ENST00000557470 MGAT1P26572 445 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 ADSLP30566 484 aaPredicted RBP5.42□□□□□ -1.54
VPS33B-207ENST00000557470 UQCRC1P31930 480 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 SSR4P51571 173 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 CLCN2P51788 898 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 AGFG1P52594 562 aaKnown RBP5.42□□□□□ -1.54
VPS33B-207ENST00000557470 PHC1P78364 1004 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 MEF2AQ02078 507 aaPredicted RBP5.42□□□□□ -1.54
VPS33B-207ENST00000557470 PLGLB1Q02325 96 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 DEFB113Q30KQ7 82 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 PGS1Q32NB8 556 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 SLC25A35Q3KQZ1 300 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 PAOXQ6QHF9 649 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 CLEC9AQ6UXN8 241 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 CYHR1Q6ZMK1 362 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 MBOAT1Q6ZNC8 495 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 C16orf47Q6ZP98 133 aaPredicted RBP5.42□□□□□ -1.54
VPS33B-207ENST00000557470 QSOX2Q6ZRP7 698 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 KIAA0408Q6ZU52 694 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 CENPUQ71F23 418 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 TRILQ7L0X0 811 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 ZNF771Q7L3S4 317 aaPredicted RBP5.42□□□□□ -1.54
VPS33B-207ENST00000557470 PIWIL4Q7Z3Z4 852 aaKnown RBP5.42□□□□□ -1.54
VPS33B-207ENST00000557470 PEX26Q7Z412 305 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 CAMKMTQ7Z624 323 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 SLC22A16Q86VW1 577 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 C17orf64Q86WR6 236 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 CILP2Q8IUL8 1156 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 CCDC170Q8IYT3 715 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 UBL4BQ8N7F7 174 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 MFSD9Q8NBP5 474 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 OR2M7Q8NG81 312 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 GOT1L1Q8NHS2 421 aaPredicted RBP5.42□□□□□ -1.54
VPS33B-207ENST00000557470 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.42□□□□□ -1.548e-9■■■■■ 57.4
VPS33B-207ENST00000557470 CREB3L4Q8TEY5 395 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 C1orf54Q8WWF1 131 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 UTP4Q969X6 686 aaKnown RBP5.42□□□□□ -1.54
VPS33B-207ENST00000557470 CNPPD1Q9BV87 410 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 KIFC1Q9BW19 673 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 FAM129AQ9BZQ8 928 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 WNT10AQ9GZT5 417 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 ATG10Q9H0Y0 220 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 CCDC68Q9H2F9 335 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 GP6Q9HCN6 339 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 NECTIN3Q9NQS3 549 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 EIF2B3Q9NR50 452 aaKnown RBP5.42□□□□□ -1.54
VPS33B-207ENST00000557470 SYBUQ9NX95 663 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 BFARQ9NZS9 450 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 PAK5Q9P286 719 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 AASSQ9UDR5 926 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 GIMAP2Q9UG22 337 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 ZNF223Q9UK11 482 aaPredicted RBP5.42□□□□□ -1.54
VPS33B-207ENST00000557470 FBXW2Q9UKT8 454 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 AMFRQ9UKV5 643 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 CBLCQ9ULV8 474 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 EDARQ9UNE0 448 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 ERVK-11Q9UQG0 969 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 REXO2Q9Y3B8 237 aaKnown RBP5.42□□□□□ -1.54
VPS33B-207ENST00000557470 GPR45Q9Y5Y3 372 aa5.42□□□□□ -1.54
VPS33B-207ENST00000557470 MXRA5Q9NR99 2828 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 UQCRHLA0A096LP55 91 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 HMX2A2RU54 273 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 CTAGE15A4D2H0 777 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 A8MVJ9 347 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 MIF4GDA9UHW6 222 aaKnown RBP5.41□□□□□ -1.54
VPS33B-207ENST00000557470 C4orf51C9J302 202 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 OR1F1O43749 312 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms