RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 ZNF438Q7Z4V0 828 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 PLCZ1Q86YW0 608 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 PLA2G15Q8NCC3 412 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 WDR48Q8TAF3 677 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 ENKURQ8TC29 256 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 SETD7Q8WTS6 366 aaKnown RBP15.47■□□□□ 0.07
SHMT2-231ENST00000557433 ZNF480Q8WV37 535 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 SCAMP4Q969E2 229 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 TRMT61AQ96FX7 289 aaKnown RBP15.47■□□□□ 0.07
SHMT2-231ENST00000557433 DMRTB1Q96MA1 342 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 SLC6A18Q96N87 628 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 FUZQ9BT04 418 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 C11orf54Q9H0W9 315 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-231ENST00000557433 RHCGQ9UBD6 479 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 PLEKHB1Q9UF11 243 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-231ENST00000557433 TESQ9UGI8 421 aaKnown RBP15.47■□□□□ 0.07
SHMT2-231ENST00000557433 PLXNA2O75051 1894 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 TMEM202A6NGA9 273 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 NOTOA8MTQ0 251 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 SLC30A4O14863 429 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 MMP20O60882 483 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 SLC10A3P09131 477 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 PRKCAP17252 672 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 AZGP1P25311 298 aaKnown RBP15.47■□□□□ 0.07
SHMT2-231ENST00000557433 KCNJ5P48544 419 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 WNT4P56705 351 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 C19orf57Q0VDD7 668 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 HNRNPA0Q13151 305 aaKnown RBP15.47■□□□□ 0.07
SHMT2-231ENST00000557433 TPBGQ13641 420 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 GPNMBQ14956 572 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 SEC23BQ15437 767 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 ZNF628Q5EBL2 1059 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 LIPKQ5VXJ0 399 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 NXPE4Q6UWF7 544 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 TCEANCQ8N8B7 351 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 RASGEF1AQ8N9B8 481 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 SLC38A5Q8WUX1 472 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 SLC5A11Q8WWX8 675 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 TTC9Q92623 222 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 GLYATL1Q969I3 302 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 ZNF764Q96H86 408 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-231ENST00000557433 RIOK2Q9BVS4 552 aaKnown RBP15.47■□□□□ 0.07
SHMT2-231ENST00000557433 SLC6A16Q9GZN6 736 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 FGF20Q9NP95 211 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-231ENST00000557433 STARD7Q9NQZ5 370 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 ACOXLQ9NUZ1 547 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 PCDHGB7Q9Y5F8 929 aa15.47■□□□□ 0.07
SHMT2-231ENST00000557433 A0A1W2PRQ8 180 aa15.46■□□□□ 0.07
SHMT2-231ENST00000557433 TMEM88BA6NKF7 163 aa15.46■□□□□ 0.07
SHMT2-231ENST00000557433 HEPACAM2A8MVW5 462 aa15.46■□□□□ 0.07
SHMT2-231ENST00000557433 TFECO14948 347 aaPredicted RBP15.46■□□□□ 0.07
SHMT2-231ENST00000557433 ARHGEF9O43307 516 aa15.46■□□□□ 0.07
SHMT2-231ENST00000557433 KLHL18O94889 574 aa15.46■□□□□ 0.07
SHMT2-231ENST00000557433 TGFB1P01137 390 aa15.46■□□□□ 0.07
SHMT2-231ENST00000557433 URODP06132 367 aa15.46■□□□□ 0.07
SHMT2-231ENST00000557433 CKMP06732 381 aa15.46■□□□□ 0.07
SHMT2-231ENST00000557433 MSL3P1P0C860 447 aa15.46■□□□□ 0.07
SHMT2-231ENST00000557433 CTSAP10619 480 aa15.46■□□□□ 0.07
SHMT2-231ENST00000557433 GSTM3P21266 225 aa15.46■□□□□ 0.07
SHMT2-231ENST00000557433 FGF9P31371 208 aaPredicted RBP15.46■□□□□ 0.07
SHMT2-231ENST00000557433 PREPP48147 710 aa15.46■□□□□ 0.07
SHMT2-231ENST00000557433 RAB40BQ12829 278 aa15.46■□□□□ 0.07
SHMT2-231ENST00000557433 TAB1Q15750 504 aa15.46■□□□□ 0.07
SHMT2-231ENST00000557433 LEXMQ3ZCV2 418 aa15.46■□□□□ 0.07
SHMT2-231ENST00000557433 PLET1Q6UQ28 207 aa15.46■□□□□ 0.07
SHMT2-231ENST00000557433 Q6ZVL8 140 aa15.46■□□□□ 0.07
SHMT2-231ENST00000557433 GPR32P1Q8NGA4 272 aa15.46■□□□□ 0.07
SHMT2-231ENST00000557433 OR52I1Q8NGK6 324 aa15.46■□□□□ 0.07
SHMT2-231ENST00000557433 ZFAND1Q8TCF1 268 aa15.46■□□□□ 0.07
SHMT2-231ENST00000557433 TTYH2Q9BSA4 534 aa15.46■□□□□ 0.07
SHMT2-231ENST00000557433 MMP28Q9H239 520 aa15.46■□□□□ 0.07
SHMT2-231ENST00000557433 CXorf36Q9H7Y0 433 aa15.46■□□□□ 0.07
SHMT2-231ENST00000557433 RPRD1BQ9NQG5 326 aaKnown RBP15.46■□□□□ 0.07
SHMT2-231ENST00000557433 SEMA3GQ9NS98 782 aa15.46■□□□□ 0.07
SHMT2-231ENST00000557433 TAAR2Q9P1P5 351 aa15.46■□□□□ 0.07
SHMT2-231ENST00000557433 A0A1W2PQ45 241 aaPredicted RBP15.45■□□□□ 0.06
SHMT2-231ENST00000557433 A0A1W2PQY0 241 aa15.45■□□□□ 0.06
SHMT2-231ENST00000557433 BCHEP06276 602 aa15.45■□□□□ 0.06
SHMT2-231ENST00000557433 KLK1P06870 262 aa15.45■□□□□ 0.06
SHMT2-231ENST00000557433 IL3P08700 152 aa15.45■□□□□ 0.06
SHMT2-231ENST00000557433 DDCP20711 480 aa15.45■□□□□ 0.06
SHMT2-231ENST00000557433 CFL1P23528 166 aaKnown RBP15.45■□□□□ 0.06
SHMT2-231ENST00000557433 HLA-FP30511 346 aa15.45■□□□□ 0.06
SHMT2-231ENST00000557433 RAB25P57735 213 aa15.45■□□□□ 0.06
SHMT2-231ENST00000557433 RACK1P63244 317 aaKnown RBP15.45■□□□□ 0.06
SHMT2-231ENST00000557433 RIN1Q13671 783 aa15.45■□□□□ 0.06
SHMT2-231ENST00000557433 PYDC2Q56P42 97 aa15.45■□□□□ 0.06
SHMT2-231ENST00000557433 ZNF730Q6ZMV8 503 aa15.45■□□□□ 0.06
SHMT2-231ENST00000557433 QSOX2Q6ZRP7 698 aa15.45■□□□□ 0.06
SHMT2-231ENST00000557433 LRRC56Q8IYG6 542 aaPredicted RBP15.45■□□□□ 0.06
SHMT2-231ENST00000557433 GPR65Q8IYL9 337 aa15.45■□□□□ 0.06
SHMT2-231ENST00000557433 NRSN1Q8IZ57 195 aa15.45■□□□□ 0.06
SHMT2-231ENST00000557433 DUSP18Q8NEJ0 188 aa15.45■□□□□ 0.06
SHMT2-231ENST00000557433 OR9A1PQ8NGU1 263 aa15.45■□□□□ 0.06
SHMT2-231ENST00000557433 HCAR2Q8TDS4 363 aa15.45■□□□□ 0.06
SHMT2-231ENST00000557433 JPH3Q8WXH2 748 aaPredicted RBP15.45■□□□□ 0.06
SHMT2-231ENST00000557433 TMEM19Q96HH6 336 aa15.45■□□□□ 0.06
SHMT2-231ENST00000557433 OR51B5Q9H339 312 aa15.45■□□□□ 0.06
SHMT2-231ENST00000557433 RANGRFQ9HD47 186 aaPredicted RBP15.45■□□□□ 0.06
SHMT2-231ENST00000557433 ZSCAN32Q9NX65 697 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms