RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 ZNF354AO60765 605 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-224ENST00000556737 ZFAND5O76080 213 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 ZWINTO95229 277 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 AIFM1O95831 613 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 GBAP04062 536 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 IGKV3-11P04433 115 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 IFNA16P05015 189 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 NR2F6P10588 404 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 CHN1P15882 459 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 ARL1P40616 181 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-224ENST00000556737 CYB561P49447 251 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 HK2P52789 917 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 CDH13P55290 713 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 FOLH1Q04609 750 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 UNC50Q53HI1 259 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 TNFAIP8L3Q5GJ75 292 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 ZNF678Q5SXM1 525 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 GFRALQ6UXV0 394 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 HSDL2Q6YN16 418 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 SH2D5Q6ZV89 423 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 MDGA2Q7Z553 956 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-224ENST00000556737 LCA5Q86VQ0 697 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 CHERPQ8IWX8 916 aaKnown RBP9.59□□□□□ -0.87
SHMT2-224ENST00000556737 OR4N5Q8IXE1 308 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 C9orf40Q8IXQ3 194 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 CYP4Z2PQ8N1L4 340 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 CPSF7Q8N684 471 aaKnown RBP9.59□□□□□ -0.87
SHMT2-224ENST00000556737 HORMAD2Q8N7B1 307 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 BANPQ8N9N5 519 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 SREK1Q8WXA9 508 aaKnown RBP9.59□□□□□ -0.87
SHMT2-224ENST00000556737 UCN3Q969E3 161 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 GPR137Q96N19 417 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 RASL10BQ96S79 203 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 SERPINI1Q99574 410 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 CENPKQ9BS16 269 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 OR8D2Q9GZM6 311 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 TSPAN10Q9H1Z9 355 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-224ENST00000556737 LIN28AQ9H9Z2 209 aaKnown RBP9.59□□□□□ -0.87
SHMT2-224ENST00000556737 FARSBQ9NSD9 589 aaKnown RBP9.59□□□□□ -0.87
SHMT2-224ENST00000556737 INTS9Q9NV88 658 aaKnown RBP9.59□□□□□ -0.87
SHMT2-224ENST00000556737 TEX10Q9NXF1 929 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-224ENST00000556737 MS4A12Q9NXJ0 267 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 FAM53CQ9NYF3 392 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 MYOTQ9UBF9 498 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 SEC14L3Q9UDX4 400 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 TRPS1Q9UHF7 1281 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 DCDC2Q9UHG0 476 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 CLCA3PQ9Y6N3 262 aa9.59□□□□□ -0.87
SHMT2-224ENST00000556737 WASHC1A8K0Z3 465 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 DLX3O60479 287 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 OR2J2O76002 312 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 OR6B1O95007 311 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 OTCP00480 354 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 CLPSP04118 112 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 FAM58BPP0C7Q3 252 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 ALOX15P16050 662 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-224ENST00000556737 SOX3P41225 446 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 SSR4P51571 173 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 HERVK_113P63132 956 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 RNF4P78317 190 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 PLIN5Q00G26 463 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 SLC18A2Q05940 514 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 GALNT1Q10472 559 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-224ENST00000556737 TBL3Q12788 808 aaKnown RBP9.58□□□□□ -0.88
SHMT2-224ENST00000556737 MAPKAPK3Q16644 382 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 SPRED3Q2MJR0 410 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 TCHHL1Q5QJ38 904 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-224ENST00000556737 C10orf62Q5T681 223 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-224ENST00000556737 TTC19Q6DKK2 380 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-224ENST00000556737 MAMDC2Q7Z304 686 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-224ENST00000556737 COMMD6Q7Z4G1 85 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 FGD2Q7Z6J4 655 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 FJX1Q86VR8 437 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 SULF2Q8IWU5 870 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 OR8K3Q8NH51 312 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 TCP10LQ8TDR4 215 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 TANKQ92844 425 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 RELTQ969Z4 430 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 ATP6V1E2Q96A05 226 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 MTFMTQ96DP5 389 aaKnown RBP9.58□□□□□ -0.88
SHMT2-224ENST00000556737 DGAT2Q96PD7 388 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 FAM111AQ96PZ2 611 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 ERVK-6Q9BXR3 956 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 MRPL1Q9BYD6 325 aaKnown RBP9.58□□□□□ -0.88
SHMT2-224ENST00000556737 SSU72Q9NP77 194 aaKnown RBP9.58□□□□□ -0.88
SHMT2-224ENST00000556737 DEPPQ9NTK1 212 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 SLC17A7Q9P2U7 560 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 GRID1Q9ULK0 1009 aa9.58□□□□□ -0.88
SHMT2-224ENST00000556737 YARS2Q9Y2Z4 477 aaKnown RBP9.58□□□□□ -0.88
SHMT2-224ENST00000556737 A0A0G2JMM0 328 aa9.57□□□□□ -0.88
SHMT2-224ENST00000556737 A0A1W2PPB8 328 aa9.57□□□□□ -0.88
SHMT2-224ENST00000556737 A0A1W2PRS3 328 aa9.57□□□□□ -0.88
SHMT2-224ENST00000556737 WDR91A4D1P6 747 aa9.57□□□□□ -0.88
SHMT2-224ENST00000556737 GLOD5A6NK44 160 aa9.57□□□□□ -0.88
SHMT2-224ENST00000556737 KIR3DP1A8MWS1 328 aa9.57□□□□□ -0.88
SHMT2-224ENST00000556737 WWP2O00308 870 aa9.57□□□□□ -0.88
SHMT2-224ENST00000556737 TM9SF1O15321 606 aa9.57□□□□□ -0.88
SHMT2-224ENST00000556737 SLC19A2O60779 497 aa9.57□□□□□ -0.88
SHMT2-224ENST00000556737 ZG16O60844 167 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms