RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 CHPT1Q8WUD6 406 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 SORCS1Q8WY21 1168 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.87□□□□□ -1.63
TMEM260-210ENST00000556422 RFT1Q96AA3 541 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 LRRC58Q96CX6 371 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 LRFN5Q96NI6 719 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 FCRL4Q96PJ5 515 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 DCUN1D5Q9BTE7 237 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 EPB41L1Q9H4G0 881 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 IPPKQ9H8X2 491 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 IL1RL2Q9HB29 575 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 SPHK2Q9NRA0 654 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 EXD2Q9NVH0 621 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 ING3Q9NXR8 418 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 CLEC5AQ9NY25 188 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 CD84Q9UIB8 345 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 CRLS1Q9UJA2 301 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 PCDHGB2Q9Y5G2 931 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 A0A1B0GVC2 190 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 OR2AT4A6NND4 320 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 WASH3PC4AMC7 463 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 PLD2O14939 933 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 GRM6O15303 877 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 NUAK1O60285 661 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 EEDO75530 441 aaKnown RBP4.86□□□□□ -1.63
TMEM260-210ENST00000556422 LGI1O95970 557 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 PDGFAP04085 211 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 HBQ1P09105 142 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 HSD17B1P14061 328 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 CHMP24386 653 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 SPINT3P49223 89 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 CCT3P49368 545 aaKnown RBP4.86□□□□□ -1.63
TMEM260-210ENST00000556422 LUMP51884 338 aaPredicted RBP4.86□□□□□ -1.63
TMEM260-210ENST00000556422 GPR68Q15743 365 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 CARD16Q5EG05 197 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 SAMD4BQ5PRF9 694 aaKnown RBP4.86□□□□□ -1.63
TMEM260-210ENST00000556422 MEDAGQ5VYS4 303 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 GDPD3Q7L5L3 318 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 GPR155Q7Z3F1 870 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 SPATA19Q7Z5L4 167 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 C1orf52Q8N6N3 182 aaKnown RBP4.86□□□□□ -1.63
TMEM260-210ENST00000556422 PPP1R35Q8TAP8 253 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 UBTD2Q8WUN7 234 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 YIPF5Q969M3 257 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 TMEM125Q96AQ2 219 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 GCNAQ96QF7 691 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 WDR77Q9BQA1 342 aaPredicted RBP4.86□□□□□ -1.63
TMEM260-210ENST00000556422 MTG2Q9H4K7 406 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 PLSCR4Q9NRQ2 329 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 HEBP1Q9NRV9 189 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 RSL24D1Q9UHA3 163 aaKnown RBP4.86□□□□□ -1.63
TMEM260-210ENST00000556422 NDUFAF1Q9Y375 327 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 WNT6Q9Y6F9 365 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 SOBPA7XYQ1 873 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 VILLO15195 856 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 SLC16A6O15403 523 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 ERAL1O75616 437 aaKnown RBP4.86□□□□□ -1.63
TMEM260-210ENST00000556422 PDE9AO76083 593 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 HOXB3P14651 431 aaPredicted RBP4.86□□□□□ -1.63
TMEM260-210ENST00000556422 DGKAP23743 735 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 BMPR1AP36894 532 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 ESRRGP62508 458 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 CDKL1Q00532 357 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 BTN1A1Q13410 526 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 GK3PQ14409 553 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 GRM2Q14416 872 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 INPP5AQ14642 412 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 KIAA0040Q15053 153 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 RABL3Q5HYI8 236 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 TMEM240Q5SV17 173 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 UGT2A3Q6UWM9 527 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 SERPINA13PQ6UXR4 307 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 NUDT18Q6ZVK8 323 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 USP45Q70EL2 814 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 SLCO6A1Q86UG4 719 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 SELENOHQ8IZQ5 122 aaKnown RBP4.86□□□□□ -1.63
TMEM260-210ENST00000556422 FNDC5Q8NAU1 212 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 CYB5D2Q8WUJ1 264 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 BADQ92934 168 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 SCAMP4Q969E2 229 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 ZNF641Q96N77 438 aaPredicted RBP4.86□□□□□ -1.63
TMEM260-210ENST00000556422 BTBD9Q96Q07 612 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 KCNJ15Q99712 375 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 THUMPD3Q9BV44 507 aaKnown RBP4.86□□□□□ -1.63
TMEM260-210ENST00000556422 SORBS1Q9BX66 1292 aaKnown RBP4.86□□□□□ -1.63
TMEM260-210ENST00000556422 PRRG3Q9BZD7 231 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 CD244Q9BZW8 370 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 RDH14Q9HBH5 336 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 ZDHHC3Q9NYG2 299 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 ANKMY1Q9P2S6 941 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 USP22Q9UPT9 525 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 UGT2A1Q9Y4X1 527 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 TNPO3Q9Y5L0 923 aaKnown RBP4.86□□□□□ -1.63
TMEM260-210ENST00000556422 MYO9BQ13459 2157 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 DENRO43583 198 aaKnown RBP4.86□□□□□ -1.63
TMEM260-210ENST00000556422 CRCPO75575 148 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 G6PDP11413 515 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 AOAHP28039 575 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 PTPN6P29350 595 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 OXTRP30559 389 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms