RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 MRPS2Q9Y399 296 aaKnown RBP16.63■□□□□ 0.25
PSEN1-212ENST00000555254 PCDHB14Q9Y5E9 798 aa16.63■□□□□ 0.25
PSEN1-212ENST00000555254 FITM1A5D6W6 292 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 ZNF860A6NHJ4 632 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 SGK494L7N484 410 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 SCN2BO60939 215 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 ERAL1O75616 437 aaKnown RBP16.62■□□□□ 0.25
PSEN1-212ENST00000555254 C6orf47O95873 294 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 ABCB1P08183 1280 aaPredicted RBP16.62■□□□□ 0.25
PSEN1-212ENST00000555254 MSL3P1P0C860 447 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 CSNK2A2P19784 350 aaPredicted RBP16.62■□□□□ 0.25
PSEN1-212ENST00000555254 EFNA1P20827 205 aaPredicted RBP16.62■□□□□ 0.25
PSEN1-212ENST00000555254 TNFRSF17Q02223 184 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 LIPEQ05469 1076 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 BNIP2Q12982 314 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 TBC1D25Q3MII6 688 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 C18orf63Q68DL7 685 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 OR52E8Q6IFG1 317 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 ARHGAP22Q7Z5H3 698 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 PROSER1Q86XN7 944 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 RNF148Q8N7C7 305 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 OR9A4Q8NGU2 314 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 ADAMTS18Q8TE60 1221 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 STMN2Q93045 179 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 CIDECQ96AQ7 238 aaPredicted RBP16.62■□□□□ 0.25
PSEN1-212ENST00000555254 NAF1Q96HR8 494 aaKnown RBP16.62■□□□□ 0.25
PSEN1-212ENST00000555254 ZNF578Q96N58 590 aaPredicted RBP16.62■□□□□ 0.25
PSEN1-212ENST00000555254 KCTD14Q9BQ13 255 aaPredicted RBP16.62■□□□□ 0.25
PSEN1-212ENST00000555254 TRIM15Q9C019 465 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 RAD21L1Q9H4I0 556 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 ASCL3Q9NQ33 180 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 FGF21Q9NSA1 209 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 ACSS1Q9NUB1 689 aaPredicted RBP16.62■□□□□ 0.25
PSEN1-212ENST00000555254 OCIAD1Q9NX40 245 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 SLC39A1Q9NY26 324 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 TAS2R9Q9NYW1 312 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 KCMF1Q9P0J7 381 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 VAPAQ9P0L0 249 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 ABCD2Q9UBJ2 740 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 PACSIN3Q9UKS6 424 aa16.62■□□□□ 0.25
PSEN1-212ENST00000555254 A0A0A6YYC8 382 aaPredicted RBP16.61■□□□□ 0.25
PSEN1-212ENST00000555254 GLOD5A6NK44 160 aa16.61■□□□□ 0.25
PSEN1-212ENST00000555254 I3L1I5 382 aaPredicted RBP16.61■□□□□ 0.25
PSEN1-212ENST00000555254 NME4O00746 187 aa16.61■□□□□ 0.25
PSEN1-212ENST00000555254 PGRMC2O15173 223 aa16.61■□□□□ 0.25
PSEN1-212ENST00000555254 GSTA4O15217 222 aa16.61■□□□□ 0.25
PSEN1-212ENST00000555254 TLX3O43711 291 aaPredicted RBP16.61■□□□□ 0.25
PSEN1-212ENST00000555254 DXOO77932 396 aaKnown RBP16.61■□□□□ 0.25
PSEN1-212ENST00000555254 NSA2O95478 260 aaKnown RBP16.61■□□□□ 0.25
PSEN1-212ENST00000555254 KRT75O95678 551 aa16.61■□□□□ 0.25
PSEN1-212ENST00000555254 RNH1P13489 461 aaKnown RBP16.61■□□□□ 0.25
PSEN1-212ENST00000555254 HSD17B1P14061 328 aa16.61■□□□□ 0.25
PSEN1-212ENST00000555254 FOLR1P15328 257 aa16.61■□□□□ 0.25
PSEN1-212ENST00000555254 TCN1P20061 433 aaPredicted RBP16.61■□□□□ 0.25
PSEN1-212ENST00000555254 SLC5A2P31639 672 aa16.61■□□□□ 0.25
PSEN1-212ENST00000555254 MPIP34949 423 aa16.61■□□□□ 0.25
PSEN1-212ENST00000555254 RAB38P57729 211 aa16.61■□□□□ 0.25
PSEN1-212ENST00000555254 TRAP1Q12931 704 aaKnown RBP16.61■□□□□ 0.25
PSEN1-212ENST00000555254 KPNB1Q14974 876 aaKnown RBP16.61■□□□□ 0.25
PSEN1-212ENST00000555254 SPDYE7PQ495Y7 208 aa16.61■□□□□ 0.25
PSEN1-212ENST00000555254 RABL3Q5HYI8 236 aa16.61■□□□□ 0.25
PSEN1-212ENST00000555254 SLC48A1Q6P1K1 146 aa16.61■□□□□ 0.25
PSEN1-212ENST00000555254 CA13Q8N1Q1 262 aa16.61■□□□□ 0.25
PSEN1-212ENST00000555254 OR4K14Q8NGD5 310 aa16.61■□□□□ 0.25
PSEN1-212ENST00000555254 GOT1L1Q8NHS2 421 aaPredicted RBP16.61■□□□□ 0.25
PSEN1-212ENST00000555254 TANKQ92844 425 aa16.61■□□□□ 0.25
PSEN1-212ENST00000555254 FAM120BQ96EK7 910 aaKnown RBP16.61■□□□□ 0.25
PSEN1-212ENST00000555254 PHF12Q96QT6 1004 aa16.61■□□□□ 0.25
PSEN1-212ENST00000555254 SLC7A5P2Q9GIP4 190 aa16.61■□□□□ 0.25
PSEN1-212ENST00000555254 MUC13Q9H3R2 512 aa16.61■□□□□ 0.25
PSEN1-212ENST00000555254 DENND2DQ9H6A0 471 aaPredicted RBP16.61■□□□□ 0.25
PSEN1-212ENST00000555254 RPF2Q9H7B2 306 aaKnown RBP16.61■□□□□ 0.25
PSEN1-212ENST00000555254 CUTCQ9NTM9 273 aa16.61■□□□□ 0.25
PSEN1-212ENST00000555254 SUCOQ9UBS9 1254 aaKnown RBP16.61■□□□□ 0.25
PSEN1-212ENST00000555254 CD300AQ9UGN4 299 aa16.61■□□□□ 0.25
PSEN1-212ENST00000555254 NDOR1Q9UHB4 597 aa16.61■□□□□ 0.25
PSEN1-212ENST00000555254 POMPQ9Y244 141 aa16.61■□□□□ 0.25
PSEN1-212ENST00000555254 MRPS33Q9Y291 106 aaKnown RBP16.61■□□□□ 0.25
PSEN1-212ENST00000555254 SNRNP200O75643 2136 aaKnown RBP16.61■□□□□ 0.25
PSEN1-212ENST00000555254 BLACEA4D250 179 aa16.6■□□□□ 0.25
PSEN1-212ENST00000555254 CLIC1O00299 241 aa16.6■□□□□ 0.25
PSEN1-212ENST00000555254 CHST10O43529 356 aa16.6■□□□□ 0.25
PSEN1-212ENST00000555254 RDH16O75452 317 aa16.6■□□□□ 0.25
PSEN1-212ENST00000555254 CTSBP07858 339 aa16.6■□□□□ 0.25
PSEN1-212ENST00000555254 UQCRC2P22695 453 aa16.6■□□□□ 0.25
PSEN1-212ENST00000555254 GPC1P35052 558 aa16.6■□□□□ 0.25
PSEN1-212ENST00000555254 SOAT1P35610 550 aa16.6■□□□□ 0.25
PSEN1-212ENST00000555254 CHI3L1P36222 383 aaPredicted RBP16.6■□□□□ 0.25
PSEN1-212ENST00000555254 CDKN2CP42773 168 aa16.6■□□□□ 0.25
PSEN1-212ENST00000555254 NCBP2P52298 156 aaKnown RBP eCLIP16.6■□□□□ 0.252e-8■■□□□ 11.9
PSEN1-212ENST00000555254 MTPNP58546 118 aa16.6■□□□□ 0.25
PSEN1-212ENST00000555254 OLR1P78380 273 aa16.6■□□□□ 0.25
PSEN1-212ENST00000555254 TRIM25Q14258 630 aaKnown RBP16.6■□□□□ 0.25
PSEN1-212ENST00000555254 TMEM164Q5U3C3 297 aa16.6■□□□□ 0.25
PSEN1-212ENST00000555254 IFNEQ86WN2 208 aa16.6■□□□□ 0.25
PSEN1-212ENST00000555254 PDSS2Q86YH6 399 aa16.6■□□□□ 0.25
PSEN1-212ENST00000555254 OR1L3Q8NH93 324 aa16.6■□□□□ 0.25
PSEN1-212ENST00000555254 MMABQ96EY8 250 aaPredicted RBP16.6■□□□□ 0.25
PSEN1-212ENST00000555254 C10orf90Q96M02 699 aa16.6■□□□□ 0.25
PSEN1-212ENST00000555254 LRGUKQ96M69 825 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms