RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 DNAJC22Q8N4W6 341 aa15.12■□□□□ 0.01
ACTN1-209ENST00000553659 TNIP2Q8NFZ5 429 aa15.12■□□□□ 0.01
ACTN1-209ENST00000553659 OR8J3Q8NGG0 315 aa15.12■□□□□ 0.01
ACTN1-209ENST00000553659 WDR20Q8TBZ3 569 aa15.12■□□□□ 0.01
ACTN1-209ENST00000553659 SLC13A3Q8WWT9 602 aa15.12■□□□□ 0.01
ACTN1-209ENST00000553659 ZNF184Q99676 751 aaPredicted RBP15.12■□□□□ 0.01
ACTN1-209ENST00000553659 PCBD2Q9H0N5 130 aa15.12■□□□□ 0.01
ACTN1-209ENST00000553659 RMND5AQ9H871 391 aa15.12■□□□□ 0.01
ACTN1-209ENST00000553659 CCDC177Q9NQR7 707 aaPredicted RBP15.12■□□□□ 0.01
ACTN1-209ENST00000553659 PLCL2Q9UPR0 1127 aa15.12■□□□□ 0.01
ACTN1-209ENST00000553659 RUVBL1Q9Y265 456 aaKnown RBP15.12■□□□□ 0.01
ACTN1-209ENST00000553659 TSC22D4Q9Y3Q8 395 aa15.12■□□□□ 0.01
ACTN1-209ENST00000553659 PCDHA9Q9Y5H5 950 aa15.12■□□□□ 0.01
ACTN1-209ENST00000553659 DIDO1Q9BTC0 2240 aaKnown RBP15.11■□□□□ 0.01
ACTN1-209ENST00000553659 H3BNX3 289 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 KDM1AO60341 852 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 CTSBP07858 339 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 UMODP07911 640 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 ATXN8OSP0DMR3 200 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 IL12AP29459 219 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 MS4A2Q01362 244 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 DOC2AQ14183 400 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 KIAA0040Q15053 153 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 CYP2A13Q16696 494 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 SLC5A12Q1EHB4 618 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 ATG9BQ674R7 924 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 LCN8Q6JVE9 175 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 MED27Q6P2C8 311 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 LCTLQ6UWM7 567 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 HIPK4Q8NE63 616 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 OR5K2Q8NHB8 316 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 ZNF480Q8WV37 535 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 TMEM125Q96AQ2 219 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 NACC2Q96BF6 587 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 TESCQ96BS2 214 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 TEX37Q96LM6 180 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 NDC1Q9BTX1 674 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 KLHL4Q9C0H6 718 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 ZBTB20Q9HC78 741 aaPredicted RBP15.11■□□□□ 0.01
ACTN1-209ENST00000553659 FARSBQ9NSD9 589 aaKnown RBP15.11■□□□□ 0.01
ACTN1-209ENST00000553659 INTS7Q9NVH2 962 aaKnown RBP15.11■□□□□ 0.01
ACTN1-209ENST00000553659 ACTR3BQ9P1U1 418 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 VPS29Q9UBQ0 182 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 LRCH1Q9Y2L9 728 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 TDRKHQ9Y2W6 561 aaKnown RBP15.11■□□□□ 0.01
ACTN1-209ENST00000553659 PCDHGA10Q9Y5H3 936 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 CNTRLQ7Z7A1 2325 aa15.11■□□□□ 0.01
ACTN1-209ENST00000553659 DOPEY1Q5JWR5 2465 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 POLEQ07864 2286 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 TCRBV3S1A0A5B6 114 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 ISM1B1AKI9 464 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 MASP2O00187 686 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 FOXE1O00358 373 aaPredicted RBP15.1■□□□□ 0.01
ACTN1-209ENST00000553659 NME4O00746 187 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 ERN1O75460 977 aaKnown RBP15.1■□□□□ 0.01
ACTN1-209ENST00000553659 BCKDHAP12694 445 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 PRPS1L1P21108 318 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 SERPINB1P30740 379 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 SLC7A1P30825 629 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 ASMTP46597 345 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 C21orf58P58505 322 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 TBPL1P62380 186 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 LRRC74AQ0VAA2 488 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 AIMP2Q13155 320 aaKnown RBP15.1■□□□□ 0.01
ACTN1-209ENST00000553659 SLC9A5Q14940 896 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 KIR2DS3Q14952 304 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 MAPKAPK3Q16644 382 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 SPIN4Q56A73 249 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 MTX3Q5HYI7 312 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 TMEM151BQ8IW70 566 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 RNF148Q8N7C7 305 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 NRG4Q8WWG1 115 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 VPS33AQ96AX1 596 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 HBEGFQ99075 208 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 RAB11FIP5Q9BXF6 653 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 PITHD1Q9GZP4 211 aaPredicted RBP15.1■□□□□ 0.01
ACTN1-209ENST00000553659 VCXQ9H320 206 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 ALG2Q9H553 416 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 AGPAT4Q9NRZ5 378 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 IRAK4Q9NWZ3 460 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 ADGRE2Q9UHX3 823 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 PPT2Q9UMR5 302 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 NTNG1Q9Y2I2 539 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 ITPR2Q14571 2701 aa15.1■□□□□ 0.01
ACTN1-209ENST00000553659 PRSS51A0A1B0GVH4 220 aa15.09■□□□□ 0.01
ACTN1-209ENST00000553659 ASPDHA6ND91 283 aa15.09■□□□□ 0.01
ACTN1-209ENST00000553659 PGRP06401 933 aa15.09■□□□□ 0.01
ACTN1-209ENST00000553659 C1GALT1C1LP0DN25 315 aa15.09■□□□□ 0.01
ACTN1-209ENST00000553659 UMPSP11172 480 aa15.09■□□□□ 0.01
ACTN1-209ENST00000553659 ERGP11308 486 aa15.09■□□□□ 0.01
ACTN1-209ENST00000553659 HOXB6P17509 224 aaKnown RBP15.09■□□□□ 0.01
ACTN1-209ENST00000553659 TCN1P20061 433 aaPredicted RBP15.09■□□□□ 0.01
ACTN1-209ENST00000553659 ALAS2P22557 587 aa15.09■□□□□ 0.01
ACTN1-209ENST00000553659 MMP11P24347 488 aa15.09■□□□□ 0.01
ACTN1-209ENST00000553659 CXCR2P25025 360 aa15.09■□□□□ 0.01
ACTN1-209ENST00000553659 HTR1EP28566 365 aa15.09■□□□□ 0.01
ACTN1-209ENST00000553659 FOXL2P58012 376 aa15.09■□□□□ 0.01
ACTN1-209ENST00000553659 MRPS22P82650 360 aaKnown RBP15.09■□□□□ 0.01
ACTN1-209ENST00000553659 SRSF11Q05519 484 aaKnown RBP15.09■□□□□ 0.01
ACTN1-209ENST00000553659 PAGE3Q5JUK9 113 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms