RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 SLBPQ14493 270 aaKnown RBP eCLIP8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 FLYWCH1Q4VC44 716 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 XKR6Q5GH73 641 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 Q5PR19 223 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 FAM219BQ5XKK7 198 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 FBXW10Q5XX13 1052 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 TMIGD1Q6UXZ0 262 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 RPS27LQ71UM5 84 aaKnown RBP8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 GOLGA7Q7Z5G4 137 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 LCA5Q86VQ0 697 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 TRPV3Q8NET8 790 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 UTP15Q8TED0 518 aaKnown RBP8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 MVB12AQ96EY5 273 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 PTCD3Q96EY7 689 aaKnown RBP8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 MMABQ96EY8 250 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 NSUN5Q96P11 429 aaKnown RBP8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 SIGLEC12Q96PQ1 595 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 UTP23Q9BRU9 249 aaKnown RBP8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 TMEM109Q9BVC6 243 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 ROPN1BQ9BZX4 212 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 DRC3Q9H069 523 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 RHBGQ9H310 441 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 IPPKQ9H8X2 491 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 ROPN1Q9HAT0 212 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 DMRT3Q9NQL9 472 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 ZNF282Q9UDV7 671 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 CDC14AQ9UNH5 594 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 TNPO3Q9Y5L0 923 aaKnown RBP8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 SLC22A7Q9Y694 548 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 A0A1B0GTH9 108 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 LRIT2A6NDA9 550 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 G3V2L1 256 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 H0YIG0 161 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 SGK494L7N484 410 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 GALR3O60755 368 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 NSA2O95478 260 aaKnown RBP8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 SERPIND1P05546 499 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 TUBBP07437 444 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 SERPINA6P08185 405 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 GSTA1P08263 222 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 CREB1P16220 341 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 KRT4P19013 534 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 CRHR1P34998 444 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 CD96P40200 585 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 HNF4AP41235 474 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 EMP2P54851 167 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 CDH13P55290 713 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 NUP107P57740 925 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 RAB8AP61006 207 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 TUBA3CQ13748 450 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 GTF2H2Q13888 395 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 OR1C1Q15619 314 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 NDUFA9Q16795 377 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 SLC25A35Q3KQZ1 300 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 UNC50Q53HI1 259 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 ACER2Q5QJU3 275 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 SLC25A25Q6KCM7 469 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 H3F3CQ6NXT2 135 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 GTF2H2CQ6P1K8 395 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 METTL2BQ6P1Q9 378 aaKnown RBP8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 TUBA3EQ6PEY2 450 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 GALNTL5Q7Z4T8 443 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 TRABD2AQ86V40 505 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 LAS2Q8IYD9 372 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 KRT78Q8N1N4 520 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 RNF175Q8N4F7 328 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 AMER2Q8N7J2 671 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 OR5T3Q8NGG3 340 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 OR51Q1Q8NH59 317 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 ZCCHC10Q8TBK6 192 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 ZNF473Q8WTR7 871 aaKnown RBP8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 Q96MF0 132 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 C1QTNF3Q9BXJ4 246 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 TGIF2Q9GZN2 237 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 PITHD1Q9GZP4 211 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 ZNF700Q9H0M5 742 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 NOL11Q9H8H0 719 aaKnown RBP8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 LGALS13Q9UHV8 139 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 ZNF225Q9UK10 706 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 PCTPQ9UKL6 214 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 CBLCQ9ULV8 474 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 ZNF232Q9UNY5 417 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 RNF11Q9Y3C5 154 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 NAALAD2Q9Y3Q0 740 aa8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 CHD3Q12873 2000 aaKnown RBP8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 HRNRQ86YZ3 2850 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC1-202ENST00000540486 LOC102723996A0A087X1L8 192 aa8.23□□□□□ -1.09
TRAPPC1-202ENST00000540486 OR2W5A6NFC9 320 aa8.23□□□□□ -1.09
TRAPPC1-202ENST00000540486 ANKDD1BA6NHY2 528 aa8.23□□□□□ -1.09
TRAPPC1-202ENST00000540486 A8MUI8 341 aa8.23□□□□□ -1.09
TRAPPC1-202ENST00000540486 SYT5O00445 386 aa8.23□□□□□ -1.09
TRAPPC1-202ENST00000540486 PLIN3O60664 434 aa8.23□□□□□ -1.09
TRAPPC1-202ENST00000540486 SMIM24O75264 130 aa8.23□□□□□ -1.09
TRAPPC1-202ENST00000540486 CLEC3AO75596 197 aa8.23□□□□□ -1.09
TRAPPC1-202ENST00000540486 TGFB1P01137 390 aa8.23□□□□□ -1.09
TRAPPC1-202ENST00000540486 PROCP04070 461 aa8.23□□□□□ -1.09
TRAPPC1-202ENST00000540486 SP1P08047 785 aa8.23□□□□□ -1.09
TRAPPC1-202ENST00000540486 CELA2AP08217 269 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms