RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 NTN3O00634 580 aaPredicted RBP11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 PDPK1O15530 556 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 DPM1O60762 260 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 C6orf47O95873 294 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 IFNA14P01570 189 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 CHRM5P08912 532 aaPredicted RBP11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 F3P13726 295 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 UQCRC2P22695 453 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 MYF6P23409 242 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 ALDH4A1P30038 563 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 CAPGP40121 348 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 ACTR1BP42025 376 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 ARSFP54793 590 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 ACTR1AP61163 376 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 MC1RQ01726 317 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 DAG1Q14118 895 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 ADPRMQ3LIE5 342 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 SLC36A3Q495N2 470 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 GCNT6Q5T4J0 391 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 NRROSQ86YC3 692 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 HIPK1Q86Z02 1210 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 ZDHHC21Q8IVQ6 265 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 C10orf111Q8N326 155 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 FAM86B1Q8N7N1 296 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 MFSD9Q8NBP5 474 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 OR5K1Q8NHB7 308 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 ZNF578Q96N58 590 aaPredicted RBP11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 TRAPPC9Q96Q05 1148 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 RBM4BQ9BQ04 359 aaKnown RBP11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 RBM4Q9BWF3 364 aaKnown RBP11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 NLNQ9BYT8 704 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 SLC6A16Q9GZN6 736 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 LRRN3Q9H3W5 708 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 SRMSQ9H3Y6 488 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 NEUROD4Q9HD90 331 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 IL1RAPQ9NPH3 570 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 ACSS1Q9NUB1 689 aaPredicted RBP11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 SCHIP1Q9P0W5 487 aaPredicted RBP11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 IFT80Q9P2H3 777 aaPredicted RBP11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 ANKMY1Q9P2S6 941 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 ERVK-11Q9UQG0 969 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 RNF215Q9Y6U7 377 aa11.31□□□□□ -0.6
CYB561A3-215ENST00000540317 A0A0A6YYD5 115 aa11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 A0A1W2PQM1 296 aa11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 RHPN2P1A8MT19 583 aa11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 ISM1B1AKI9 464 aa11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 AGRPO00253 132 aa11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 DLGAP1O14490 977 aa11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 NUDT21O43809 227 aaKnown RBP11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 LCMT2O60294 686 aaKnown RBP11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 ZNF682O95780 498 aa11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 ALBP02768 609 aa11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 MT-ND1P03886 318 aa11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 CHI3L1P36222 383 aaPredicted RBP11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 FRKP42685 505 aaPredicted RBP11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 CRATP43155 626 aa11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 MAGEA8P43361 318 aa11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 ARHGDIAP52565 204 aa11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 STXBP1P61764 594 aaKnown RBP11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 RPS15AP62244 130 aaKnown RBP11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 GAB1Q13480 694 aa11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 MLC1Q15049 377 aa11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 ZNF630Q2M218 657 aaPredicted RBP11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 RFX4Q33E94 735 aa11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 LRRC23Q53EV4 343 aaPredicted RBP11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 ZNF425Q6IV72 752 aa11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 CLEC4FQ8N1N0 589 aa11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 WDR36Q8NI36 951 aaKnown RBP11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 SNIP1Q8TAD8 396 aaKnown RBP11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 MAGEE2Q8TD90 523 aaPredicted RBP11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 CIDECQ96AQ7 238 aaPredicted RBP11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 ZBED6CLQ96FA7 236 aaPredicted RBP11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 KCNC2Q96PR1 638 aa11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 DPH7Q9BTV6 452 aa11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 YTHDF1Q9BYJ9 559 aaKnown RBP11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 STRADBQ9C0K7 418 aa11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 TWSG1Q9GZX9 223 aa11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 SLC6A20Q9NP91 592 aa11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 THSD1Q9NS62 852 aa11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 USE1Q9NZ43 259 aa11.3□□□□□ -0.6
CYB561A3-215ENST00000540317 TRBV23OR9-2A0A075B6M9 112 aa11.29□□□□□ -0.6
CYB561A3-215ENST00000540317 A6NCN8 305 aa11.29□□□□□ -0.6
CYB561A3-215ENST00000540317 D6RAR5 112 aa11.29□□□□□ -0.6
CYB561A3-215ENST00000540317 TMX2-CTNND1H3BSU7 103 aa11.29□□□□□ -0.6
CYB561A3-215ENST00000540317 ZW10O43264 779 aa11.29□□□□□ -0.6
CYB561A3-215ENST00000540317 TNFRSF21O75509 655 aa11.29□□□□□ -0.6
CYB561A3-215ENST00000540317 H6PDO95479 791 aa11.29□□□□□ -0.6
CYB561A3-215ENST00000540317 CLPTM1O96005 669 aa11.29□□□□□ -0.6
CYB561A3-215ENST00000540317 NTRK1P04629 796 aa11.29□□□□□ -0.6
CYB561A3-215ENST00000540317 FABP3P05413 133 aa11.29□□□□□ -0.6
CYB561A3-215ENST00000540317 PNLIPP16233 465 aa11.29□□□□□ -0.6
CYB561A3-215ENST00000540317 EFNA1P20827 205 aaPredicted RBP11.29□□□□□ -0.6
CYB561A3-215ENST00000540317 BCL6P41182 706 aa11.29□□□□□ -0.6
CYB561A3-215ENST00000540317 SSR2P43308 183 aa11.29□□□□□ -0.6
CYB561A3-215ENST00000540317 PRIM2P49643 509 aa11.29□□□□□ -0.6
CYB561A3-215ENST00000540317 MAZP56270 477 aaKnown RBP11.29□□□□□ -0.6
CYB561A3-215ENST00000540317 PCBP4P57723 403 aaKnown RBP11.29□□□□□ -0.6
CYB561A3-215ENST00000540317 MYBPC1Q00872 1141 aa11.29□□□□□ -0.6
CYB561A3-215ENST00000540317 RELAQ04206 551 aa11.29□□□□□ -0.6
CYB561A3-215ENST00000540317 SLC9A5Q14940 896 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms