RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 PLIN5Q00G26 463 aa13.22□□□□□ -0.29
RAB28-205ENST00000508274 TSNAXIP1Q2TAA8 658 aa13.22□□□□□ -0.29
RAB28-205ENST00000508274 GLE1Q53GS7 698 aaKnown RBP13.22□□□□□ -0.29
RAB28-205ENST00000508274 METTL2BQ6P1Q9 378 aaKnown RBP13.22□□□□□ -0.29
RAB28-205ENST00000508274 LURAP1LQ8IV03 231 aa13.22□□□□□ -0.29
RAB28-205ENST00000508274 GPALPP1Q8IXQ4 340 aa13.22□□□□□ -0.29
RAB28-205ENST00000508274 SLC34A3Q8N130 599 aa13.22□□□□□ -0.29
RAB28-205ENST00000508274 OR2M7Q8NG81 312 aa13.22□□□□□ -0.29
RAB28-205ENST00000508274 OR8K3Q8NH51 312 aa13.22□□□□□ -0.29
RAB28-205ENST00000508274 TANKQ92844 425 aa13.22□□□□□ -0.29
RAB28-205ENST00000508274 ZNF180Q9UJW8 692 aa13.22□□□□□ -0.29
RAB28-205ENST00000508274 NFU1Q9UMS0 254 aa13.22□□□□□ -0.29
RAB28-205ENST00000508274 HRH3Q9Y5N1 445 aa13.22□□□□□ -0.29
RAB28-205ENST00000508274 NCKAP5O14513 1909 aa13.22□□□□□ -0.29
RAB28-205ENST00000508274 FOXE1O00358 373 aaPredicted RBP13.21□□□□□ -0.29
RAB28-205ENST00000508274 PPP6CO00743 305 aa13.21□□□□□ -0.29
RAB28-205ENST00000508274 SMIM24O75264 130 aa13.21□□□□□ -0.29
RAB28-205ENST00000508274 AIFM1O95831 613 aa13.21□□□□□ -0.29
RAB28-205ENST00000508274 TPOP07202 933 aa13.21□□□□□ -0.29
RAB28-205ENST00000508274 RPS17P08708 135 aaKnown RBP13.21□□□□□ -0.29
RAB28-205ENST00000508274 FAM58BPP0C7Q3 252 aa13.21□□□□□ -0.29
RAB28-205ENST00000508274 NR2F6P10588 404 aa13.21□□□□□ -0.29
RAB28-205ENST00000508274 ALOX15P16050 662 aaPredicted RBP13.21□□□□□ -0.29
RAB28-205ENST00000508274 TSPAN8P19075 237 aa13.21□□□□□ -0.29
RAB28-205ENST00000508274 CNTFP26441 200 aa13.21□□□□□ -0.29
RAB28-205ENST00000508274 TLX1P31314 330 aaPredicted RBP13.21□□□□□ -0.29
RAB28-205ENST00000508274 ARFIP1P53367 373 aa13.21□□□□□ -0.29
RAB28-205ENST00000508274 HERVK_113P63132 956 aa13.21□□□□□ -0.29
RAB28-205ENST00000508274 ERVK-8P63133 956 aa13.21□□□□□ -0.29
RAB28-205ENST00000508274 ASPHQ12797 758 aa13.21□□□□□ -0.29
RAB28-205ENST00000508274 CYP20A1Q6UW02 462 aa13.21□□□□□ -0.29
RAB28-205ENST00000508274 CD163Q86VB7 1156 aa13.21□□□□□ -0.29
RAB28-205ENST00000508274 NUDT13Q86X67 352 aa13.21□□□□□ -0.29
RAB28-205ENST00000508274 TMEM151AQ8N4L1 468 aa13.21□□□□□ -0.29
RAB28-205ENST00000508274 OR4F6Q8NGB9 312 aa13.21□□□□□ -0.29
RAB28-205ENST00000508274 RBM18Q96H35 190 aaKnown RBP13.21□□□□□ -0.29
RAB28-205ENST00000508274 NTMT1Q9BV86 223 aa13.21□□□□□ -0.29
RAB28-205ENST00000508274 CNPPD1Q9BV87 410 aa13.21□□□□□ -0.29
RAB28-205ENST00000508274 ERVK-6Q9BXR3 956 aa13.21□□□□□ -0.29
RAB28-205ENST00000508274 DEFB127Q9H1M4 99 aa13.21□□□□□ -0.29
RAB28-205ENST00000508274 LYARQ9NX58 379 aaKnown RBP13.21□□□□□ -0.29
RAB28-205ENST00000508274 TEX10Q9NXF1 929 aaPredicted RBP13.21□□□□□ -0.29
RAB28-205ENST00000508274 ERVK-19Q9WJR5 959 aa13.21□□□□□ -0.29
RAB28-205ENST00000508274 KLF2Q9Y5W3 355 aaPredicted RBP13.21□□□□□ -0.29
RAB28-205ENST00000508274 MYO9AB2RTY4 2548 aa13.21□□□□□ -0.3
RAB28-205ENST00000508274 CREBBPQ92793 2442 aa13.21□□□□□ -0.3
RAB28-205ENST00000508274 EXOC1LA0A1B0GW35 172 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 A8MT66 165 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 PRRG2O14669 202 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 NADKO95544 446 aaPredicted RBP13.2□□□□□ -0.3
RAB28-205ENST00000508274 SNRPB2P08579 225 aaKnown RBP13.2□□□□□ -0.3
RAB28-205ENST00000508274 CCL3P10147 92 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 COL6A2P12110 1019 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 PTGS2P35354 604 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 CDH13P55290 713 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 PPIAP62937 165 aaKnown RBP13.2□□□□□ -0.3
RAB28-205ENST00000508274 PLGLB1Q02325 96 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 FRG2Q64ET8 278 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 LETMD1Q6P1Q0 360 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 XKRXQ6PP77 449 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 RTL4Q6ZR62 310 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 TICAM1Q8IUC6 712 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 ST13P4Q8IZP2 240 aaPredicted RBP13.2□□□□□ -0.3
RAB28-205ENST00000508274 OR5L2Q8NGL0 311 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 FBXL20Q96IG2 436 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 FRG2BQ96QU4 278 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 DMRTA2Q96SC8 542 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 MRPL57Q9BQC6 102 aaKnown RBP13.2□□□□□ -0.3
RAB28-205ENST00000508274 MRPL1Q9BYD6 325 aaKnown RBP13.2□□□□□ -0.3
RAB28-205ENST00000508274 TTTY12Q9BZ98 90 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 MRPL46Q9H2W6 279 aaKnown RBP13.2□□□□□ -0.3
RAB28-205ENST00000508274 PLSCR2Q9NRY7 297 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 FARSBQ9NSD9 589 aaKnown RBP13.2□□□□□ -0.3
RAB28-205ENST00000508274 NINQ8N4C6 2090 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 C19orf84I3L1E1 186 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 PGRMC2O15173 223 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 OR10H2O60403 315 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 GPR75O95800 540 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 CLPSP04118 112 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 SNRPAP09012 282 aaKnown RBP13.2□□□□□ -0.3
RAB28-205ENST00000508274 DNASE1L1P49184 302 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 ZNF267Q14586 743 aaPredicted RBP13.2□□□□□ -0.3
RAB28-205ENST00000508274 ZNF630Q2M218 657 aaPredicted RBP13.2□□□□□ -0.3
RAB28-205ENST00000508274 MPEG1Q2M385 716 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 SGO1Q5FBB7 561 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 PIGGQ5H8A4 983 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 TTC19Q6DKK2 380 aaPredicted RBP13.2□□□□□ -0.3
RAB28-205ENST00000508274 OPN5Q6U736 354 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 LYPD8Q6UX82 237 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 NUBPLQ8TB37 319 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 FAM57AQ8TBR7 257 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 ZNF483Q8TF39 744 aaPredicted RBP13.2□□□□□ -0.3
RAB28-205ENST00000508274 GAL3ST4Q96RP7 486 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 SERPINI1Q99574 410 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 PSD3Q9NYI0 1048 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 TMCO1Q9UM00 188 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 PPT2Q9UMR5 302 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 LIPGQ9Y5X9 500 aa13.2□□□□□ -0.3
RAB28-205ENST00000508274 EXPH5Q8NEV8 1989 aa13.19□□□□□ -0.3
RAB28-205ENST00000508274 E9PLN8 166 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms