RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 TMPRSS12Q86WS5 348 aa16.42■□□□□ 0.22
RNF4-209ENST00000507784 SAMD14Q8IZD0 417 aaPredicted RBP16.42■□□□□ 0.22
RNF4-209ENST00000507784 MR1Q95460 341 aa16.42■□□□□ 0.22
RNF4-209ENST00000507784 ANKRD9Q96BM1 317 aaPredicted RBP16.42■□□□□ 0.22
RNF4-209ENST00000507784 MAGED4Q96JG8 741 aa16.42■□□□□ 0.22
RNF4-209ENST00000507784 AMDHD1Q96NU7 426 aa16.42■□□□□ 0.22
RNF4-209ENST00000507784 CDRT15Q96T59 188 aa16.42■□□□□ 0.22
RNF4-209ENST00000507784 CGREF1Q99674 301 aa16.42■□□□□ 0.22
RNF4-209ENST00000507784 ZPBPQ9BS86 351 aa16.42■□□□□ 0.22
RNF4-209ENST00000507784 CADM1Q9BY67 442 aaKnown RBP16.42■□□□□ 0.22
RNF4-209ENST00000507784 ASPSCR1Q9BZE9 553 aa16.42■□□□□ 0.22
RNF4-209ENST00000507784 SLAMF7Q9NQ25 335 aa16.42■□□□□ 0.22
RNF4-209ENST00000507784 ACSS1Q9NUB1 689 aaPredicted RBP16.42■□□□□ 0.22
RNF4-209ENST00000507784 TAS2R9Q9NYW1 312 aa16.42■□□□□ 0.22
RNF4-209ENST00000507784 IFT80Q9P2H3 777 aaPredicted RBP16.42■□□□□ 0.22
RNF4-209ENST00000507784 GPN3Q9UHW5 284 aaPredicted RBP16.42■□□□□ 0.22
RNF4-209ENST00000507784 L3MBTL1Q9Y468 752 aa16.42■□□□□ 0.22
RNF4-209ENST00000507784 PCDHB14Q9Y5E9 798 aa16.42■□□□□ 0.22
RNF4-209ENST00000507784 PCDHGA7Q9Y5G6 932 aa16.42■□□□□ 0.22
RNF4-209ENST00000507784 SNX8Q9Y5X2 465 aa16.42■□□□□ 0.22
RNF4-209ENST00000507784 OR2W5A6NFC9 320 aa16.41■□□□□ 0.22
RNF4-209ENST00000507784 MEN1O00255 615 aa16.41■□□□□ 0.22
RNF4-209ENST00000507784 CPMP14384 443 aa16.41■□□□□ 0.22
RNF4-209ENST00000507784 NT5EP21589 574 aa16.41■□□□□ 0.22
RNF4-209ENST00000507784 IL10P22301 178 aa16.41■□□□□ 0.22
RNF4-209ENST00000507784 PTGER1P34995 402 aa16.41■□□□□ 0.22
RNF4-209ENST00000507784 FRKP42685 505 aaPredicted RBP16.41■□□□□ 0.22
RNF4-209ENST00000507784 HBA1P69905 142 aa16.41■□□□□ 0.22
RNF4-209ENST00000507784 SPDYE7PQ495Y7 208 aa16.41■□□□□ 0.22
RNF4-209ENST00000507784 LRIF1Q5T3J3 769 aa16.41■□□□□ 0.22
RNF4-209ENST00000507784 TMEM164Q5U3C3 297 aa16.41■□□□□ 0.22
RNF4-209ENST00000507784 COX15Q7KZN9 410 aa16.41■□□□□ 0.22
RNF4-209ENST00000507784 MARCH9Q86YJ5 346 aa16.41■□□□□ 0.22
RNF4-209ENST00000507784 ZC3H7AQ8IWR0 971 aaKnown RBP16.41■□□□□ 0.22
RNF4-209ENST00000507784 CLEC4FQ8N1N0 589 aa16.41■□□□□ 0.22
RNF4-209ENST00000507784 LRRC25Q8N386 305 aaPredicted RBP16.41■□□□□ 0.22
RNF4-209ENST00000507784 GALNT6Q8NCL4 622 aa16.41■□□□□ 0.22
RNF4-209ENST00000507784 ZNF681Q96N22 645 aa16.41■□□□□ 0.22
RNF4-209ENST00000507784 PTCHD1Q96NR3 888 aa16.41■□□□□ 0.22
RNF4-209ENST00000507784 OR1F2PQ96R84 312 aa16.41■□□□□ 0.22
RNF4-209ENST00000507784 DDA1Q9BW61 102 aa16.41■□□□□ 0.22
RNF4-209ENST00000507784 TRIM8Q9BZR9 551 aa16.41■□□□□ 0.22
RNF4-209ENST00000507784 SLC22A11Q9NSA0 550 aa16.41■□□□□ 0.22
RNF4-209ENST00000507784 SLC6A13Q9NSD5 602 aa16.41■□□□□ 0.22
RNF4-209ENST00000507784 VAPAQ9P0L0 249 aa16.41■□□□□ 0.22
RNF4-209ENST00000507784 ZNF282Q9UDV7 671 aaPredicted RBP16.41■□□□□ 0.22
RNF4-209ENST00000507784 PACSIN3Q9UKS6 424 aa16.41■□□□□ 0.22
RNF4-209ENST00000507784 NUP214P35658 2090 aaPredicted RBP16.41■□□□□ 0.22
RNF4-209ENST00000507784 ZFHX2Q9C0A1 2572 aaPredicted RBP16.4■□□□□ 0.22
RNF4-209ENST00000507784 NUP210LQ5VU65 1888 aa16.4■□□□□ 0.22
RNF4-209ENST00000507784 FXYD1O00168 92 aa16.4■□□□□ 0.22
RNF4-209ENST00000507784 OR10H2O60403 315 aa16.4■□□□□ 0.22
RNF4-209ENST00000507784 TNFSF15O95150 251 aa16.4■□□□□ 0.22
RNF4-209ENST00000507784 BMP10O95393 424 aa16.4■□□□□ 0.22
RNF4-209ENST00000507784 RORAP35398 523 aa16.4■□□□□ 0.22
RNF4-209ENST00000507784 CHI3L1P36222 383 aaPredicted RBP16.4■□□□□ 0.22
RNF4-209ENST00000507784 CDK9P50750 372 aaKnown RBP16.4■□□□□ 0.22
RNF4-209ENST00000507784 SLC7A2P52569 658 aa16.4■□□□□ 0.22
RNF4-209ENST00000507784 HSD17B7P56937 341 aa16.4■□□□□ 0.22
RNF4-209ENST00000507784 RUNDC3AQ59EK9 446 aa16.4■□□□□ 0.22
RNF4-209ENST00000507784 LCN10Q6JVE6 187 aa16.4■□□□□ 0.22
RNF4-209ENST00000507784 NANOGP8Q6NSW7 305 aa16.4■□□□□ 0.22
RNF4-209ENST00000507784 OVCH1Q7RTY7 1134 aa16.4■□□□□ 0.22
RNF4-209ENST00000507784 ARHGAP24Q8N264 748 aa16.4■□□□□ 0.22
RNF4-209ENST00000507784 TRIML2Q8N7C3 387 aa16.4■□□□□ 0.22
RNF4-209ENST00000507784 OR9A2Q8NGT5 310 aa16.4■□□□□ 0.22
RNF4-209ENST00000507784 DOK4Q8TEW6 326 aa16.4■□□□□ 0.22
RNF4-209ENST00000507784 PPWD1Q96BP3 646 aaKnown RBP16.4■□□□□ 0.22
RNF4-209ENST00000507784 ANKRD27Q96NW4 1050 aa16.4■□□□□ 0.22
RNF4-209ENST00000507784 GPATCH1Q9BRR8 931 aaKnown RBP16.4■□□□□ 0.22
RNF4-209ENST00000507784 THUMPD3Q9BV44 507 aaKnown RBP16.4■□□□□ 0.22
RNF4-209ENST00000507784 ALOXE3Q9BYJ1 711 aa16.4■□□□□ 0.22
RNF4-209ENST00000507784 CXorf36Q9H7Y0 433 aa16.4■□□□□ 0.22
RNF4-209ENST00000507784 NANOGQ9H9S0 305 aa16.4■□□□□ 0.22
RNF4-209ENST00000507784 NECTIN3Q9NQS3 549 aa16.4■□□□□ 0.22
RNF4-209ENST00000507784 LANCL2Q9NS86 450 aa16.4■□□□□ 0.22
RNF4-209ENST00000507784 SEMA3GQ9NS98 782 aa16.4■□□□□ 0.22
RNF4-209ENST00000507784 SLC25A37Q9NYZ2 338 aa16.4■□□□□ 0.22
RNF4-209ENST00000507784 CTSFQ9UBX1 484 aa16.4■□□□□ 0.22
RNF4-209ENST00000507784 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.4■□□□□ 0.22
RNF4-209ENST00000507784 MYO15AQ9UKN7 3530 aa16.4■□□□□ 0.22
RNF4-209ENST00000507784 FER1L5A0AVI2 2057 aa16.39■□□□□ 0.21
RNF4-209ENST00000507784 C15orf38-AP3S2A0A0A6YYH1 394 aa16.39■□□□□ 0.21
RNF4-209ENST00000507784 TEX51A0A1B0GUA7 166 aa16.39■□□□□ 0.21
RNF4-209ENST00000507784 A0A1W2PNU3 283 aaPredicted RBP16.39■□□□□ 0.21
RNF4-209ENST00000507784 EVPLLA8MZ36 301 aa16.39■□□□□ 0.21
RNF4-209ENST00000507784 STK17BO94768 372 aa16.39■□□□□ 0.21
RNF4-209ENST00000507784 IFNA16P05015 189 aa16.39■□□□□ 0.21
RNF4-209ENST00000507784 NQO1P15559 274 aaKnown RBP16.39■□□□□ 0.21
RNF4-209ENST00000507784 TNNI3P19429 210 aa16.39■□□□□ 0.21
RNF4-209ENST00000507784 MAOAP21397 527 aa16.39■□□□□ 0.21
RNF4-209ENST00000507784 UQCRC2P22695 453 aa16.39■□□□□ 0.21
RNF4-209ENST00000507784 MTPNP58546 118 aa16.39■□□□□ 0.21
RNF4-209ENST00000507784 KCNJ2P63252 427 aa16.39■□□□□ 0.21
RNF4-209ENST00000507784 MLC1Q15049 377 aa16.39■□□□□ 0.21
RNF4-209ENST00000507784 LTB4RQ15722 352 aa16.39■□□□□ 0.21
RNF4-209ENST00000507784 RABL3Q5HYI8 236 aa16.39■□□□□ 0.21
RNF4-209ENST00000507784 ZNF385CQ66K41 422 aaPredicted RBP16.39■□□□□ 0.21
RNF4-209ENST00000507784 C8orf82Q6P1X6 216 aaPredicted RBP16.39■□□□□ 0.21
RNF4-209ENST00000507784 FAM199XQ6PEV8 388 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms