RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 A0A1W2PS29 197 aa23.44■■□□□ 1.34
LSM6-202ENST00000502781 ATP6AP2O75787 350 aa23.44■■□□□ 1.34
LSM6-202ENST00000502781 SLC35E2P0CK97 266 aa23.44■■□□□ 1.34
LSM6-202ENST00000502781 NR1D1P20393 614 aa23.44■■□□□ 1.34
LSM6-202ENST00000502781 TACR1P25103 407 aa23.44■■□□□ 1.34
LSM6-202ENST00000502781 GALNSP34059 522 aa23.44■■□□□ 1.34
LSM6-202ENST00000502781 HK2P52789 917 aa23.44■■□□□ 1.34
LSM6-202ENST00000502781 PLIN5Q00G26 463 aa23.44■■□□□ 1.34
LSM6-202ENST00000502781 HEPACAMQ14CZ8 416 aa23.44■■□□□ 1.34
LSM6-202ENST00000502781 PDCD2Q16342 344 aaPredicted RBP23.44■■□□□ 1.34
LSM6-202ENST00000502781 LACTB2Q53H82 288 aaPredicted RBP23.44■■□□□ 1.34
LSM6-202ENST00000502781 C6orf136Q5SQH8 315 aa23.44■■□□□ 1.34
LSM6-202ENST00000502781 AGAP7PQ5VUJ5 663 aa23.44■■□□□ 1.34
LSM6-202ENST00000502781 IGFL2Q6UWQ7 119 aa23.44■■□□□ 1.34
LSM6-202ENST00000502781 OR4K14Q8NGD5 310 aa23.44■■□□□ 1.34
LSM6-202ENST00000502781 BRIX1Q8TDN6 353 aaKnown RBP23.44■■□□□ 1.34
LSM6-202ENST00000502781 RBM18Q96H35 190 aaKnown RBP23.44■■□□□ 1.34
LSM6-202ENST00000502781 AGAP4Q96P64 663 aa23.44■■□□□ 1.34
LSM6-202ENST00000502781 PELOQ9BRX2 385 aaKnown RBP23.44■■□□□ 1.34
LSM6-202ENST00000502781 INTS9Q9NV88 658 aaKnown RBP23.44■■□□□ 1.34
LSM6-202ENST00000502781 EHD3Q9NZN3 535 aa23.44■■□□□ 1.34
LSM6-202ENST00000502781 GIMAP2Q9UG22 337 aa23.44■■□□□ 1.34
LSM6-202ENST00000502781 CLCA3PQ9Y6N3 262 aa23.44■■□□□ 1.34
LSM6-202ENST00000502781 ALPPP05187 535 aa23.43■■□□□ 1.34
LSM6-202ENST00000502781 PIK3R1P27986 724 aa23.43■■□□□ 1.34
LSM6-202ENST00000502781 RPL38P63173 70 aaKnown RBP23.43■■□□□ 1.34
LSM6-202ENST00000502781 GALNTL6Q49A17 601 aa23.43■■□□□ 1.34
LSM6-202ENST00000502781 ATP6AP1LQ52LC2 224 aa23.43■■□□□ 1.34
LSM6-202ENST00000502781 CRB2Q5IJ48 1285 aa23.43■■□□□ 1.34
LSM6-202ENST00000502781 IGFL3Q6UXB1 125 aa23.43■■□□□ 1.34
LSM6-202ENST00000502781 DGAT2L6Q6ZPD8 337 aa23.43■■□□□ 1.34
LSM6-202ENST00000502781 IKBIPQ70UQ0 350 aa23.43■■□□□ 1.34
LSM6-202ENST00000502781 MORN4Q8NDC4 146 aa23.43■■□□□ 1.34
LSM6-202ENST00000502781 DGAT2Q96PD7 388 aa23.43■■□□□ 1.34
LSM6-202ENST00000502781 ZNF223Q9UK11 482 aaPredicted RBP23.43■■□□□ 1.34
LSM6-202ENST00000502781 EXO1Q9UQ84 846 aaKnown RBP23.43■■□□□ 1.34
LSM6-202ENST00000502781 ZNF451Q9Y4E5 1061 aa23.43■■□□□ 1.34
LSM6-202ENST00000502781 C17orf105B2RV13 164 aa23.42■■□□□ 1.34
LSM6-202ENST00000502781 PEX11AO75192 247 aa23.42■■□□□ 1.34
LSM6-202ENST00000502781 DDAH2O95865 285 aa23.42■■□□□ 1.34
LSM6-202ENST00000502781 CPMP14384 443 aa23.42■■□□□ 1.34
LSM6-202ENST00000502781 SDC1P18827 310 aa23.42■■□□□ 1.34
LSM6-202ENST00000502781 DDCP20711 480 aa23.42■■□□□ 1.34
LSM6-202ENST00000502781 XKP51811 444 aa23.42■■□□□ 1.34
LSM6-202ENST00000502781 ASB18Q6ZVZ8 466 aa23.42■■□□□ 1.34
LSM6-202ENST00000502781 HPS6Q86YV9 775 aa23.42■■□□□ 1.34
LSM6-202ENST00000502781 PPWD1Q96BP3 646 aaKnown RBP23.42■■□□□ 1.34
LSM6-202ENST00000502781 EGLN2Q96KS0 407 aa23.42■■□□□ 1.34
LSM6-202ENST00000502781 ZNF681Q96N22 645 aa23.42■■□□□ 1.34
LSM6-202ENST00000502781 MEAF6Q9HAF1 191 aa23.42■■□□□ 1.34
LSM6-202ENST00000502781 MED4Q9NPJ6 270 aa23.42■■□□□ 1.34
LSM6-202ENST00000502781 ZNF71Q9NQZ8 489 aaPredicted RBP23.42■■□□□ 1.34
LSM6-202ENST00000502781 TAS2R7Q9NYW3 318 aa23.42■■□□□ 1.34
LSM6-202ENST00000502781 PSME2Q9UL46 239 aa23.42■■□□□ 1.34
LSM6-202ENST00000502781 CNTRLQ7Z7A1 2325 aa23.42■■□□□ 1.34
LSM6-202ENST00000502781 COL6A6A6NMZ7 2263 aa23.42■■□□□ 1.34
LSM6-202ENST00000502781 COX7A2P14406 83 aa23.41■■□□□ 1.34
LSM6-202ENST00000502781 CEBPEQ15744 281 aa23.41■■□□□ 1.34
LSM6-202ENST00000502781 SPRED3Q2MJR0 410 aa23.41■■□□□ 1.34
LSM6-202ENST00000502781 SMU1Q2TAY7 513 aa23.41■■□□□ 1.34
LSM6-202ENST00000502781 ISLR2Q6UXK2 745 aa23.41■■□□□ 1.34
LSM6-202ENST00000502781 ARMC10Q8N2F6 343 aa23.41■■□□□ 1.34
LSM6-202ENST00000502781 KIF2BQ8N4N8 673 aa23.41■■□□□ 1.34
LSM6-202ENST00000502781 SIRT6Q8N6T7 355 aa23.41■■□□□ 1.34
LSM6-202ENST00000502781 NCLNQ969V3 563 aa23.41■■□□□ 1.34
LSM6-202ENST00000502781 TUBGCP3Q96CW5 907 aa23.41■■□□□ 1.34
LSM6-202ENST00000502781 CNRIP1Q96F85 164 aaPredicted RBP23.41■■□□□ 1.34
LSM6-202ENST00000502781 VMP1Q96GC9 406 aa23.41■■□□□ 1.34
LSM6-202ENST00000502781 C7orf26Q96N11 449 aa23.41■■□□□ 1.34
LSM6-202ENST00000502781 LMF1Q96S06 567 aa23.41■■□□□ 1.34
LSM6-202ENST00000502781 NUF2Q9BZD4 464 aa23.41■■□□□ 1.34
LSM6-202ENST00000502781 ZBTB20Q9HC78 741 aaPredicted RBP23.41■■□□□ 1.34
LSM6-202ENST00000502781 HDAC3O15379 428 aa23.4■■□□□ 1.34
LSM6-202ENST00000502781 IGKV3-11P04433 115 aa23.4■■□□□ 1.34
LSM6-202ENST00000502781 BCKDHAP12694 445 aa23.4■■□□□ 1.34
LSM6-202ENST00000502781 PORP16435 677 aaPredicted RBP23.4■■□□□ 1.34
LSM6-202ENST00000502781 TNNI3P19429 210 aa23.4■■□□□ 1.34
LSM6-202ENST00000502781 ALDH9A1P49189 494 aa23.4■■□□□ 1.34
LSM6-202ENST00000502781 ZNF750Q32MQ0 723 aa23.4■■□□□ 1.34
LSM6-202ENST00000502781 LRRC34Q8IZ02 419 aa23.4■■□□□ 1.34
LSM6-202ENST00000502781 SLC2A12Q8TD20 617 aa23.4■■□□□ 1.34
LSM6-202ENST00000502781 LRRC8CQ8TDW0 803 aa23.4■■□□□ 1.34
LSM6-202ENST00000502781 ZNF721Q8TF20 911 aa23.4■■□□□ 1.34
LSM6-202ENST00000502781 CKAP2Q8WWK9 683 aa23.4■■□□□ 1.34
LSM6-202ENST00000502781 KLHL29Q96CT2 875 aa23.4■■□□□ 1.34
LSM6-202ENST00000502781 ZNF764Q96H86 408 aaPredicted RBP23.4■■□□□ 1.34
LSM6-202ENST00000502781 NPAS2Q99743 824 aa23.4■■□□□ 1.34
LSM6-202ENST00000502781 KCNK13Q9HB14 408 aa23.4■■□□□ 1.34
LSM6-202ENST00000502781 PTGFRNQ9P2B2 879 aa23.4■■□□□ 1.34
LSM6-202ENST00000502781 UTS2RQ9UKP6 389 aa23.4■■□□□ 1.34
LSM6-202ENST00000502781 SLCO1B7G3V0H7 640 aa23.4■■□□□ 1.34
LSM6-202ENST00000502781 ERAL1O75616 437 aaKnown RBP23.4■■□□□ 1.34
LSM6-202ENST00000502781 ATP1B1P05026 303 aa23.4■■□□□ 1.34
LSM6-202ENST00000502781 CSNK2A2P19784 350 aaPredicted RBP23.4■■□□□ 1.34
LSM6-202ENST00000502781 CLCN2P51788 898 aa23.4■■□□□ 1.34
LSM6-202ENST00000502781 C2orf80Q0P641 193 aa23.4■■□□□ 1.34
LSM6-202ENST00000502781 MFAP5Q13361 173 aa23.4■■□□□ 1.34
LSM6-202ENST00000502781 B3GNTL1Q67FW5 361 aaPredicted RBP23.4■■□□□ 1.34
LSM6-202ENST00000502781 OR1N1Q8NGS0 311 aa23.4■■□□□ 1.34
LSM6-202ENST00000502781 PIWIL2Q8TC59 973 aaKnown RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms