RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 TBL3Q12788 808 aaKnown RBP22.91■■□□□ 1.26
UPF3A-209ENST00000492270 LCP2Q13094 533 aa22.91■■□□□ 1.26
UPF3A-209ENST00000492270 OR52E8Q6IFG1 317 aa22.91■■□□□ 1.26
UPF3A-209ENST00000492270 GFRALQ6UXV0 394 aa22.91■■□□□ 1.26
UPF3A-209ENST00000492270 MDGA2Q7Z553 956 aa22.91■■□□□ 1.26
UPF3A-209ENST00000492270 ST13P4Q8IZP2 240 aaPredicted RBP22.91■■□□□ 1.26
UPF3A-209ENST00000492270 CPSF7Q8N684 471 aaKnown RBP22.91■■□□□ 1.26
UPF3A-209ENST00000492270 CCNYL1Q8N7R7 359 aa22.91■■□□□ 1.26
UPF3A-209ENST00000492270 AENQ8WTP8 325 aaKnown RBP22.91■■□□□ 1.26
UPF3A-209ENST00000492270 RBM18Q96H35 190 aaKnown RBP22.91■■□□□ 1.26
UPF3A-209ENST00000492270 SENP5Q96HI0 755 aaPredicted RBP22.91■■□□□ 1.26
UPF3A-209ENST00000492270 RASL10BQ96S79 203 aa22.91■■□□□ 1.26
UPF3A-209ENST00000492270 COPS7AQ9UBW8 275 aa22.91■■□□□ 1.26
UPF3A-209ENST00000492270 ADAM29Q9UKF5 820 aa22.91■■□□□ 1.26
UPF3A-209ENST00000492270 SLC5A6Q9Y289 635 aa22.91■■□□□ 1.26
UPF3A-209ENST00000492270 TLDC2A0PJX2 215 aa22.9■■□□□ 1.26
UPF3A-209ENST00000492270 ZNF354AO60765 605 aaPredicted RBP22.9■■□□□ 1.26
UPF3A-209ENST00000492270 MLYCDO95822 493 aa22.9■■□□□ 1.26
UPF3A-209ENST00000492270 LDLRP01130 860 aa22.9■■□□□ 1.26
UPF3A-209ENST00000492270 IGKV3-11P04433 115 aa22.9■■□□□ 1.26
UPF3A-209ENST00000492270 KRT4P19013 534 aa22.9■■□□□ 1.26
UPF3A-209ENST00000492270 HMOX2P30519 316 aa22.9■■□□□ 1.26
UPF3A-209ENST00000492270 NDUFAF5Q5TEU4 345 aa22.9■■□□□ 1.26
UPF3A-209ENST00000492270 PAGE2Q7Z2X7 111 aa22.9■■□□□ 1.26
UPF3A-209ENST00000492270 C9orf40Q8IXQ3 194 aa22.9■■□□□ 1.26
UPF3A-209ENST00000492270 MMP21Q8N119 569 aa22.9■■□□□ 1.26
UPF3A-209ENST00000492270 C1orf52Q8N6N3 182 aaKnown RBP22.9■■□□□ 1.26
UPF3A-209ENST00000492270 METTL6Q8TCB7 284 aa22.9■■□□□ 1.26
UPF3A-209ENST00000492270 TMEM125Q96AQ2 219 aa22.9■■□□□ 1.26
UPF3A-209ENST00000492270 SEC14L3Q9UDX4 400 aa22.9■■□□□ 1.26
UPF3A-209ENST00000492270 GRID1Q9ULK0 1009 aa22.9■■□□□ 1.26
UPF3A-209ENST00000492270 TIMM22Q9Y584 194 aa22.9■■□□□ 1.26
UPF3A-209ENST00000492270 CYSRT1A8MQ03 144 aa22.89■■□□□ 1.25
UPF3A-209ENST00000492270 UBFD1O14562 309 aaKnown RBP22.89■■□□□ 1.25
UPF3A-209ENST00000492270 COPEO14579 308 aa22.89■■□□□ 1.25
UPF3A-209ENST00000492270 OR6B1O95007 311 aa22.89■■□□□ 1.25
UPF3A-209ENST00000492270 KRT6AP02538 564 aa22.89■■□□□ 1.25
UPF3A-209ENST00000492270 KRT6BP04259 564 aa22.89■■□□□ 1.25
UPF3A-209ENST00000492270 CRHR1P34998 444 aa22.89■■□□□ 1.25
UPF3A-209ENST00000492270 SOX3P41225 446 aa22.89■■□□□ 1.25
UPF3A-209ENST00000492270 KRT6CP48668 564 aa22.89■■□□□ 1.25
UPF3A-209ENST00000492270 MAPK12P53778 367 aa22.89■■□□□ 1.25
UPF3A-209ENST00000492270 ERVK-8P63133 956 aa22.89■■□□□ 1.25
UPF3A-209ENST00000492270 CCDC153Q494R4 210 aa22.89■■□□□ 1.25
UPF3A-209ENST00000492270 RNFT1Q5M7Z0 435 aa22.89■■□□□ 1.25
UPF3A-209ENST00000492270 C7orf57Q8NEG2 295 aa22.89■■□□□ 1.25
UPF3A-209ENST00000492270 OR8K3Q8NH51 312 aa22.89■■□□□ 1.25
UPF3A-209ENST00000492270 AGAP11Q8TF27 550 aa22.89■■□□□ 1.25
UPF3A-209ENST00000492270 ASB15Q8WXK1 588 aa22.89■■□□□ 1.25
UPF3A-209ENST00000492270 FBXL20Q96IG2 436 aa22.89■■□□□ 1.25
UPF3A-209ENST00000492270 CNPPD1Q9BV87 410 aa22.89■■□□□ 1.25
UPF3A-209ENST00000492270 ERVK-19Q9WJR5 959 aa22.89■■□□□ 1.25
UPF3A-209ENST00000492270 EXPH5Q8NEV8 1989 aa22.89■■□□□ 1.25
UPF3A-209ENST00000492270 LRRTM2O43300 516 aa22.88■■□□□ 1.25
UPF3A-209ENST00000492270 OR10H2O60403 315 aa22.88■■□□□ 1.25
UPF3A-209ENST00000492270 NUDT17P0C025 328 aa22.88■■□□□ 1.25
UPF3A-209ENST00000492270 CCT5P48643 541 aa22.88■■□□□ 1.25
UPF3A-209ENST00000492270 FOXA1P55317 472 aa22.88■■□□□ 1.25
UPF3A-209ENST00000492270 PKNOX1P55347 436 aa22.88■■□□□ 1.25
UPF3A-209ENST00000492270 ALDH6A1Q02252 535 aaKnown RBP22.88■■□□□ 1.25
UPF3A-209ENST00000492270 SLC18A2Q05940 514 aa22.88■■□□□ 1.25
UPF3A-209ENST00000492270 CSTF3Q12996 717 aaKnown RBP22.88■■□□□ 1.25
UPF3A-209ENST00000492270 BIKQ13323 160 aa22.88■■□□□ 1.25
UPF3A-209ENST00000492270 C4orf17Q53FE4 359 aa22.88■■□□□ 1.25
UPF3A-209ENST00000492270 C1QL3Q5VWW1 255 aa22.88■■□□□ 1.25
UPF3A-209ENST00000492270 IL20RBQ6UXL0 311 aa22.88■■□□□ 1.25
UPF3A-209ENST00000492270 FAM98AQ8NCA5 519 aaKnown RBP22.88■■□□□ 1.25
UPF3A-209ENST00000492270 CCDC126Q96EE4 140 aa22.88■■□□□ 1.25
UPF3A-209ENST00000492270 PELOQ9BRX2 385 aaKnown RBP22.88■■□□□ 1.25
UPF3A-209ENST00000492270 ACPTQ9BZG2 426 aa22.88■■□□□ 1.25
UPF3A-209ENST00000492270 MID1IP1Q9NPA3 183 aa22.88■■□□□ 1.25
UPF3A-209ENST00000492270 VPS29Q9UBQ0 182 aa22.88■■□□□ 1.25
UPF3A-209ENST00000492270 ERVK-11Q9UQG0 969 aa22.88■■□□□ 1.25
UPF3A-209ENST00000492270 STK38LQ9Y2H1 464 aa22.88■■□□□ 1.25
UPF3A-209ENST00000492270 GTF3C1Q12789 2109 aa22.88■■□□□ 1.25
UPF3A-209ENST00000492270 DOPEY1Q5JWR5 2465 aa22.88■■□□□ 1.25
UPF3A-209ENST00000492270 A8MVJ9 347 aa22.87■■□□□ 1.25
UPF3A-209ENST00000492270 ULK1O75385 1050 aa22.87■■□□□ 1.25
UPF3A-209ENST00000492270 ESRRBO95718 433 aa22.87■■□□□ 1.25
UPF3A-209ENST00000492270 HSD3B1P14060 373 aa22.87■■□□□ 1.25
UPF3A-209ENST00000492270 HSD3B2P26439 372 aa22.87■■□□□ 1.25
UPF3A-209ENST00000492270 RFC3P40938 356 aa22.87■■□□□ 1.25
UPF3A-209ENST00000492270 MEOX1P50221 254 aa22.87■■□□□ 1.25
UPF3A-209ENST00000492270 NAGLUP54802 743 aa22.87■■□□□ 1.25
UPF3A-209ENST00000492270 GPR85P60893 370 aa22.87■■□□□ 1.25
UPF3A-209ENST00000492270 ZNF267Q14586 743 aaPredicted RBP22.87■■□□□ 1.25
UPF3A-209ENST00000492270 SPRED3Q2MJR0 410 aa22.87■■□□□ 1.25
UPF3A-209ENST00000492270 ZNF750Q32MQ0 723 aa22.87■■□□□ 1.25
UPF3A-209ENST00000492270 WDR93Q6P2C0 686 aa22.87■■□□□ 1.25
UPF3A-209ENST00000492270 SCIMPQ6UWF3 145 aa22.87■■□□□ 1.25
UPF3A-209ENST00000492270 SULF2Q8IWU5 870 aa22.87■■□□□ 1.25
UPF3A-209ENST00000492270 CCDC63Q8NA47 563 aa22.87■■□□□ 1.25
UPF3A-209ENST00000492270 RIT1Q92963 219 aa22.87■■□□□ 1.25
UPF3A-209ENST00000492270 HPF1Q9NWY4 346 aa22.87■■□□□ 1.25
UPF3A-209ENST00000492270 MYO7BQ6PIF6 2116 aa22.87■■□□□ 1.25
UPF3A-209ENST00000492270 WIPF3A6NGB9 483 aa22.86■■□□□ 1.25
UPF3A-209ENST00000492270 NPIPA5E9PKD4 350 aa22.86■■□□□ 1.25
UPF3A-209ENST00000492270 DYRK3O43781 588 aa22.86■■□□□ 1.25
UPF3A-209ENST00000492270 CLPSP04118 112 aa22.86■■□□□ 1.25
UPF3A-209ENST00000492270 ENO1P06733 434 aaKnown RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms