RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 OR5H15A6NDH6 313 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 TRIM49BA6NDI0 452 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 TMEM110-MUSTN1A8MSY1 372 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 NEDD8-MDP1E9PL57 170 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 H0YIG0 161 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 PES1O00541 588 aaKnown RBP3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 SNX4O95219 450 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 APBB3O95704 486 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 OLFM2O95897 454 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 HMOX1P09601 288 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 CCDC159P0C7I6 412 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 GATA2P23769 480 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 SLC1A4P43007 532 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 ZFP36L2P47974 494 aaKnown RBP3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 FHITP49789 147 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 SLC26A5P58743 744 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 RPS27AP62979 156 aaKnown RBP3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 ARF5P84085 180 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 HTD2P86397 168 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 LASP1Q14847 261 aaKnown RBP3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 SIX1Q15475 284 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 SPHARQ15513 63 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 ADCK1Q86TW2 530 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 CACUL1Q86Y37 369 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 HDDC3Q8N4P3 179 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 ICA1LQ8NDH6 482 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 DENND6BQ8NEG7 585 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 SSC4DQ8WTU2 575 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 CTNNBL1Q8WYA6 563 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 PRCCQ92733 491 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 PRAM1Q96QH2 718 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 SLC5A7Q9GZV3 580 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 TAS2R3Q9NYW6 316 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 STX8Q9UNK0 236 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 EXOC7Q9UPT5 735 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 SMC3Q9UQE7 1217 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 NIP7Q9Y221 180 aaKnown RBP eCLIP3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 KCNK6Q9Y257 313 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 OR1A2Q9Y585 309 aa3.92□□□□□ -1.78
HMGB1P38-201ENST00000490557 LOC390937A0A1W2PQ73 354 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 K7EPI3 171 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 CACNB4O00305 520 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 MCF2LO15068 1137 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 KIAA0513O60268 411 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 REC8O95072 547 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 IL4RP24394 825 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 SPRP35270 261 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 ID1P41134 155 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 KHKP50053 298 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 STARD6P59095 220 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 GSTO1P78417 241 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 TEFQ10587 303 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 RIGQ13278 110 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 KCTD11Q693B1 232 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 CAPN13Q6MZZ7 669 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 NEPROQ6NW34 567 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 SLC39A11Q8N1S5 342 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 CLEC1AQ8NC01 280 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 TRPV3Q8NET8 790 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 OR1B1Q8NGR6 318 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 PSMA8Q8TAA3 256 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 NABP1Q96AH0 204 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 GUCD1Q96NT3 240 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 RCHY1Q96PM5 261 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 ABCG8Q9H221 673 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 MARCH7Q9H992 704 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 ANO10Q9NW15 660 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 MIS18AQ9NYP9 233 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 CGNQ9P2M7 1197 aaKnown RBP3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 IL19Q9UHD0 177 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 LAMP5Q9UJQ1 280 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 RARRES3Q9UL19 164 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 HPCAL4Q9UM19 191 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 AURKCQ9UQB9 309 aa3.91□□□□□ -1.78
HMGB1P38-201ENST00000490557 A0A0A6YYC8 382 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 TMEM129A0AVI4 362 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 SYCE3A1L190 88 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 BCLAF3A2AJT9 711 aaKnown RBP3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 ERICH4A6NGS2 130 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 SHISA7A6NL88 538 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 I3L1I5 382 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 SMPD2O60906 423 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 TSC22D2O75157 780 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 SH3BGRLO75368 114 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 GMNNO75496 209 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 PALMO75781 387 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 BCAS2O75934 225 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 OR6A2O95222 327 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 MT-ND1P03886 318 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 FERP16591 822 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 STIP1P31948 543 aaKnown RBP3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 SERPINH1P50454 418 aaKnown RBP3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 CCR4P51679 360 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 KRTAP10-12P60413 245 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 GABPAQ06546 454 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 STXBP2Q15833 593 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 ZNF239Q16600 458 aaKnown RBP3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 TMEM44Q2T9K0 475 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 POM121L1PQ3SYA9 428 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms