RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 CCNDBP1O95273 360 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 F10P00742 488 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 FGGP02679 453 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 ANXA5P08758 320 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 C8orf89P0DMQ9 161 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 MYBL2P10244 700 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 MLNP12872 115 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 OSMP13725 252 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 ENO3P13929 434 aaPredicted RBP5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 HTR1EP28566 365 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 IMPA1P29218 277 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 PTGER4P35408 488 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 CSNK1G2P78368 415 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 BASP1P80723 227 aaKnown RBP5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 ADORA2A-AS1P86434 159 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 MAT1AQ00266 395 aaKnown RBP5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 MALLQ13021 153 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 PTK6Q13882 451 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 NDUFA9Q16795 377 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 KCTD19Q17RG1 926 aaPredicted RBP5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 ACER2Q5QJU3 275 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 ABHD17BQ5VST6 288 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 ANKRD22Q5VYY1 191 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 MBNL2Q5VZF2 373 aaKnown RBP5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 MTFR2Q6P444 385 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 XKRXQ6PP77 449 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 TMEM207Q6UWW9 146 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 RHOUQ7L0Q8 258 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 CPEB2Q7Z5Q1 589 aaKnown RBP5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 ANKRD37Q7Z713 158 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 PLD3Q8IV08 490 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 SIAH3Q8IW03 269 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 DENND6AQ8IWF6 608 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 CHERPQ8IWX8 916 aaKnown RBP5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 ULK2Q8IYT8 1036 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 PRELID2Q8N945 189 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 PPFIBP2Q8ND30 876 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 MDS2Q8NDY4 140 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 MCUQ8NE86 351 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 OR9A4Q8NGU2 314 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 OR51Q1Q8NH59 317 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 M1APQ8TC57 530 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 CD200R1Q8TD46 325 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 MAIP1Q8WWC4 291 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 RERGQ96A58 199 aaPredicted RBP5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 SCMH1Q96GD3 660 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 CCDC138Q96M89 665 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 PRAP1Q96NZ9 151 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 SIGLEC12Q96PQ1 595 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 EBNA1BP2Q99848 306 aaKnown RBP5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 SARGQ9BW04 601 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 TSGA10Q9BZW7 698 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 CHST11Q9NPF2 352 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 UTP6Q9NYH9 597 aaKnown RBP5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 SEC14L3Q9UDX4 400 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 PCYOX1Q9UHG3 505 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 GUCA1BQ9UMX6 200 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 NEU2Q9Y3R4 380 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 C2CD3Q4AC94 2353 aa5.96□□□□□ -1.45
PRPF40A-210ENST00000489741 SPG11Q96JI7 2443 aa5.96□□□□□ -1.45
PRPF40A-210ENST00000489741 TRGV8A0A0C4DH27 118 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 IGHV3-20A0A0C4DH32 117 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 SDR42E2A6NKP2 422 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 CCL21O00585 134 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 ZBTB14O43829 449 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 KIF5CO60282 957 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 SLC19A2O60779 497 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 NCR1O76036 304 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 NEURL1O76050 574 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 HAUS5O94927 633 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 F7P08709 466 aaPredicted RBP5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 NPPBP16860 134 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 IL10P22301 178 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 MAGEA3P43357 314 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 AVPR1BP47901 424 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 RAP2BP61225 183 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 RPS15AP62244 130 aaKnown RBP5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 SARNPP82979 210 aaKnown RBP5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 RHAGQ02094 409 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 CTBP1Q13363 440 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 CUL1Q13616 776 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 DHX34Q14147 1143 aaKnown RBP5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 C3AR1Q16581 482 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 TTLL9Q3SXZ7 439 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 KRTCAP3Q53RY4 240 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 ZNF766Q5HY98 468 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 ZNF470Q6ECI4 717 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 TTC27Q6P3X3 843 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 LANCL3Q6ZV70 420 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 GSTA5Q7RTV2 222 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 ZNF572Q7Z3I7 529 aaPredicted RBP5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 PDSS2Q86YH6 399 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 BEST3Q8N1M1 668 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 PQLC1Q8N2U9 271 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 ABHD11Q8NFV4 315 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 OR4K1Q8NGD4 311 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 METTL21AQ8WXB1 218 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 ZNF354BQ96LW1 612 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 GPR137Q96N19 417 aa5.96□□□□□ -1.46
PRPF40A-210ENST00000489741 GPR21Q99679 349 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms