RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 NTRK1P04629 796 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 ATP6V1B2P21281 511 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 CYP51A1Q16850 503 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 SPDYE7PQ495Y7 208 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 AASDHQ4L235 1098 aaPredicted RBP20.38■□□□□ 0.85
SMC4-221ENST00000489573 LCN8Q6JVE9 175 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 ANGPTL8Q6UXH0 198 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 MICU2Q8IYU8 434 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 CCDC116Q8IYX3 515 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 SHISA5Q8N114 240 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 LRRC25Q8N386 305 aaPredicted RBP20.38■□□□□ 0.85
SMC4-221ENST00000489573 TMEM52Q8NDY8 209 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 OR52N2Q8NGI0 321 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 REXO5Q96IC2 774 aaKnown RBP20.38■□□□□ 0.85
SMC4-221ENST00000489573 RAD21L1Q9H4I0 556 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 SIDT1Q9NXL6 827 aaKnown RBP20.38■□□□□ 0.85
SMC4-221ENST00000489573 NDOR1Q9UHB4 597 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 MAGEL2Q9UJ55 1249 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 DMDP11532 3685 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 CACNA1HO95180 2353 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 ELOVL7A1L3X0 281 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 FKBP6O75344 327 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 SOX11P35716 441 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 XKP51811 444 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 MAT1AQ00266 395 aaKnown RBP20.38■□□□□ 0.85
SMC4-221ENST00000489573 FOLH1Q04609 750 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 RGNQ15493 299 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 CYP2R1Q6VVX0 501 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 SPATA24Q86W54 205 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 PROSER1Q86XN7 944 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 PEX11GQ96HA9 241 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 OR6C1Q96RD1 312 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 DPH2Q9BQC3 489 aaPredicted RBP20.38■□□□□ 0.85
SMC4-221ENST00000489573 SPATA9Q9BWV2 254 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 IRF2BPLQ9H1B7 796 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 EPS8L2Q9H6S3 715 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 SEMA3GQ9NS98 782 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 CDC14AQ9UNH5 594 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 MRPS33Q9Y291 106 aaKnown RBP20.38■□□□□ 0.85
SMC4-221ENST00000489573 BLACEA4D250 179 aa20.37■□□□□ 0.85
SMC4-221ENST00000489573 DSCR3O14972 297 aa20.37■□□□□ 0.85
SMC4-221ENST00000489573 CBFA2T3O75081 653 aa20.37■□□□□ 0.85
SMC4-221ENST00000489573 GGT1P19440 569 aa20.37■□□□□ 0.85
SMC4-221ENST00000489573 MVDP53602 400 aa20.37■□□□□ 0.85
SMC4-221ENST00000489573 NHLH1Q02575 133 aa20.37■□□□□ 0.85
SMC4-221ENST00000489573 ZFP36L1Q07352 338 aaKnown RBP20.37■□□□□ 0.85
SMC4-221ENST00000489573 VAC14Q08AM6 782 aa20.37■□□□□ 0.85
SMC4-221ENST00000489573 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.37■□□□□ 0.851e-13■■■■■ 65.9
SMC4-221ENST00000489573 PRAMEF17Q5VTA0 474 aa20.37■□□□□ 0.85
SMC4-221ENST00000489573 CPZQ66K79 652 aa20.37■□□□□ 0.85
SMC4-221ENST00000489573 AAGABQ6PD74 315 aa20.37■□□□□ 0.85
SMC4-221ENST00000489573 TMEM64Q6YI46 380 aa20.37■□□□□ 0.85
SMC4-221ENST00000489573 OR4N5Q8IXE1 308 aa20.37■□□□□ 0.85
SMC4-221ENST00000489573 DCLRE1BQ9H816 532 aa20.37■□□□□ 0.85
SMC4-221ENST00000489573 PARD6AQ9NPB6 346 aa20.37■□□□□ 0.85
SMC4-221ENST00000489573 DHCR7Q9UBM7 475 aaKnown RBP20.37■□□□□ 0.85
SMC4-221ENST00000489573 RARRES3Q9UL19 164 aa20.37■□□□□ 0.85
SMC4-221ENST00000489573 SRPK3Q9UPE1 567 aa20.37■□□□□ 0.85
SMC4-221ENST00000489573 TMEM184BQ9Y519 407 aaPredicted RBP20.37■□□□□ 0.85
SMC4-221ENST00000489573 C4orf47A7E2U8 309 aa20.36■□□□□ 0.85
SMC4-221ENST00000489573 GSTA4O15217 222 aa20.36■□□□□ 0.85
SMC4-221ENST00000489573 FGF17O60258 216 aa20.36■□□□□ 0.85
SMC4-221ENST00000489573 GPR75O95800 540 aa20.36■□□□□ 0.85
SMC4-221ENST00000489573 CPMP14384 443 aa20.36■□□□□ 0.85
SMC4-221ENST00000489573 NCK1P16333 377 aa20.36■□□□□ 0.85
SMC4-221ENST00000489573 ALAS2P22557 587 aa20.36■□□□□ 0.85
SMC4-221ENST00000489573 PPP2R1BP30154 601 aa20.36■□□□□ 0.85
SMC4-221ENST00000489573 HOXD11P31277 338 aaPredicted RBP20.36■□□□□ 0.85
SMC4-221ENST00000489573 FADDQ13158 208 aa20.36■□□□□ 0.85
SMC4-221ENST00000489573 SYT16Q17RD7 645 aa20.36■□□□□ 0.85
SMC4-221ENST00000489573 SAXO2Q658L1 398 aa20.36■□□□□ 0.85
SMC4-221ENST00000489573 ERICH5Q6P6B1 374 aa20.36■□□□□ 0.85
SMC4-221ENST00000489573 B3GNT8Q7Z7M8 397 aa20.36■□□□□ 0.85
SMC4-221ENST00000489573 OR51Q1Q8NH59 317 aa20.36■□□□□ 0.85
SMC4-221ENST00000489573 SFXN5Q8TD22 340 aa20.36■□□□□ 0.85
SMC4-221ENST00000489573 NEURL3Q96EH8 262 aa20.36■□□□□ 0.85
SMC4-221ENST00000489573 RSRC1Q96IZ7 334 aaKnown RBP20.36■□□□□ 0.85
SMC4-221ENST00000489573 RBCK1Q9BYM8 510 aa20.36■□□□□ 0.85
SMC4-221ENST00000489573 CHST8Q9H2A9 424 aa20.36■□□□□ 0.85
SMC4-221ENST00000489573 RASSF4Q9H2L5 321 aa20.36■□□□□ 0.85
SMC4-221ENST00000489573 RNPEPL1Q9HAU8 725 aa20.36■□□□□ 0.85
SMC4-221ENST00000489573 FAM86C1Q9NVL1 165 aa20.36■□□□□ 0.85
SMC4-221ENST00000489573 GPATCH2Q9NW75 528 aa20.36■□□□□ 0.85
SMC4-221ENST00000489573 MAU2Q9Y6X3 613 aa20.36■□□□□ 0.85
SMC4-221ENST00000489573 A0A1B0GX78 115 aa20.35■□□□□ 0.85
SMC4-221ENST00000489573 AQP12BA6NM10 295 aa20.35■□□□□ 0.85
SMC4-221ENST00000489573 H0Y3Z8 333 aa20.35■□□□□ 0.85
SMC4-221ENST00000489573 LDB3O75112 727 aa20.35■□□□□ 0.85
SMC4-221ENST00000489573 GMNNO75496 209 aa20.35■□□□□ 0.85
SMC4-221ENST00000489573 C8BP07358 591 aa20.35■□□□□ 0.85
SMC4-221ENST00000489573 CSTF2P33240 577 aaKnown RBP eCLIP20.35■□□□□ 0.85
SMC4-221ENST00000489573 NBL1P41271 181 aa20.35■□□□□ 0.85
SMC4-221ENST00000489573 CRATP43155 626 aa20.35■□□□□ 0.85
SMC4-221ENST00000489573 CCT3P49368 545 aaKnown RBP20.35■□□□□ 0.85
SMC4-221ENST00000489573 ID2Q02363 134 aa20.35■□□□□ 0.85
SMC4-221ENST00000489573 RCN1Q15293 331 aa20.35■□□□□ 0.85
SMC4-221ENST00000489573 GLYATQ6IB77 296 aa20.35■□□□□ 0.85
SMC4-221ENST00000489573 RNF130Q86XS8 419 aa20.35■□□□□ 0.85
SMC4-221ENST00000489573 AQP12AQ8IXF9 295 aa20.35■□□□□ 0.85
SMC4-221ENST00000489573 ZNF595Q8IYB9 648 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms