RNA–Protein interactions for RNA: ENST00000489274.1

NINJ1-204, Transcript of ninjurin 1, humanhuman

TSL 2

Gene NINJ1, Length 2,026 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-204ENST00000489274 KRT84Q9NSB2 600 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 GIMAP4Q9NUV9 329 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 C2orf42Q9NWW7 574 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 PSME2Q9UL46 239 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 DUSP12Q9UNI6 340 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 ENPP4Q9Y6X5 453 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 XIRP2A4UGR9 3374 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 LRP4O75096 1905 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 TMEM247A6NEH6 219 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 URADA6NGE7 173 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 ZNF888P0CJ79 500 aaPredicted RBP13.76□□□□□ -0.21
NINJ1-204ENST00000489274 RHCEP18577 417 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 TNFRSF1BP20333 461 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 CD247P20963 164 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 MPIP34949 423 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 CLK3P49761 638 aaKnown RBP13.76□□□□□ -0.21
NINJ1-204ENST00000489274 ANXA11P50995 505 aaKnown RBP13.76□□□□□ -0.21
NINJ1-204ENST00000489274 SH3BGRP55822 239 aaPredicted RBP13.76□□□□□ -0.21
NINJ1-204ENST00000489274 GABARAPL2P60520 117 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 GAS6Q14393 721 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 SUZ12Q15022 739 aaKnown RBP13.76□□□□□ -0.21
NINJ1-204ENST00000489274 MEP1AQ16819 746 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 DUSP7Q16829 419 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 CTU2Q2VPK5 515 aaKnown RBP13.76□□□□□ -0.21
NINJ1-204ENST00000489274 LAIR2Q6ISS4 152 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 GPR141Q7Z602 305 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 TAF8Q7Z7C8 310 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 RBM12BQ8IXT5 1001 aaKnown RBP13.76□□□□□ -0.21
NINJ1-204ENST00000489274 TTC29Q8NA56 475 aaPredicted RBP13.76□□□□□ -0.21
NINJ1-204ENST00000489274 SMYD1Q8NB12 490 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 CAMKVQ8NCB2 501 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 APOBEC4Q8WW27 367 aaKnown RBP13.76□□□□□ -0.21
NINJ1-204ENST00000489274 RASSF5Q8WWW0 418 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 PATE1Q8WXA2 126 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 SERINC2Q96SA4 455 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 PIP5K1AQ99755 562 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 MAPKAP1Q9BPZ7 522 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 OR51I1Q9H343 314 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 RIBC2Q9H4K1 309 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 PRDM9Q9NQV7 894 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 ZCCHC3Q9NUD5 404 aaKnown RBP13.76□□□□□ -0.21
NINJ1-204ENST00000489274 EXD2Q9NVH0 621 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 KIF17Q9P2E2 1029 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 P2RX2Q9UBL9 471 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 BLOC1S6Q9UL45 172 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 NDRG4Q9ULP0 352 aaKnown RBP13.76□□□□□ -0.21
NINJ1-204ENST00000489274 TESMINQ9Y4I5 508 aa13.76□□□□□ -0.21
NINJ1-204ENST00000489274 IGHV1OR15-9A0A0B4J2B8 117 aa13.75□□□□□ -0.21
NINJ1-204ENST00000489274 RECKO95980 971 aa13.75□□□□□ -0.21
NINJ1-204ENST00000489274 CTSEP14091 401 aa13.75□□□□□ -0.21
NINJ1-204ENST00000489274 MATN1P21941 496 aa13.75□□□□□ -0.21
NINJ1-204ENST00000489274 TTKP33981 857 aa13.75□□□□□ -0.21
NINJ1-204ENST00000489274 YAP1P46937 504 aaKnown RBP13.75□□□□□ -0.21
NINJ1-204ENST00000489274 FZD5Q13467 585 aa13.75□□□□□ -0.21
NINJ1-204ENST00000489274 SKIV2LQ15477 1246 aaKnown RBP13.75□□□□□ -0.21
NINJ1-204ENST00000489274 MICAQ29983 383 aa13.75□□□□□ -0.21
NINJ1-204ENST00000489274 ZNF542PQ5EBM4 170 aa13.75□□□□□ -0.21
NINJ1-204ENST00000489274 MANEAQ5SRI9 462 aa13.75□□□□□ -0.21
NINJ1-204ENST00000489274 B3GNT6Q6ZMB0 384 aa13.75□□□□□ -0.21
NINJ1-204ENST00000489274 ZNF605Q86T29 641 aa13.75□□□□□ -0.21
NINJ1-204ENST00000489274 CCDC116Q8IYX3 515 aa13.75□□□□□ -0.21
NINJ1-204ENST00000489274 GALNT15Q8N3T1 639 aa13.75□□□□□ -0.21
NINJ1-204ENST00000489274 OR56A1Q8NGH5 318 aa13.75□□□□□ -0.21
NINJ1-204ENST00000489274 BAHD1Q8TBE0 780 aaPredicted RBP13.75□□□□□ -0.21
NINJ1-204ENST00000489274 MIPOL1Q8TD10 442 aa13.75□□□□□ -0.21
NINJ1-204ENST00000489274 SLC37A2Q8TED4 501 aa13.75□□□□□ -0.21
NINJ1-204ENST00000489274 RSC1A1Q92681 617 aa13.75□□□□□ -0.21
NINJ1-204ENST00000489274 ZNF566Q969W8 418 aa13.75□□□□□ -0.21
NINJ1-204ENST00000489274 NMD3Q96D46 503 aaKnown RBP13.75□□□□□ -0.21
NINJ1-204ENST00000489274 ZNF607Q96SK3 696 aa13.75□□□□□ -0.21
NINJ1-204ENST00000489274 PSD2Q9BQI7 771 aa13.75□□□□□ -0.21
NINJ1-204ENST00000489274 GABARAPL3Q9BY60 117 aa13.75□□□□□ -0.21
NINJ1-204ENST00000489274 PTTG2Q9NZH5 202 aa13.75□□□□□ -0.21
NINJ1-204ENST00000489274 KCMF1Q9P0J7 381 aa13.75□□□□□ -0.21
NINJ1-204ENST00000489274 PHF11Q9UIL8 331 aa13.75□□□□□ -0.21
NINJ1-204ENST00000489274 MRPS17Q9Y2R5 130 aaKnown RBP13.75□□□□□ -0.21
NINJ1-204ENST00000489274 SH3GLB1Q9Y371 365 aa13.75□□□□□ -0.21
NINJ1-204ENST00000489274 FAM32AQ9Y421 112 aaKnown RBP13.75□□□□□ -0.21
NINJ1-204ENST00000489274 UNC80Q8N2C7 3258 aa13.75□□□□□ -0.21
NINJ1-204ENST00000489274 SPTBN5Q9NRC6 3674 aaKnown RBP13.75□□□□□ -0.21
NINJ1-204ENST00000489274 A0A0J9YVX5 310 aa13.74□□□□□ -0.21
NINJ1-204ENST00000489274 CCDC160A6NGH7 325 aa13.74□□□□□ -0.21
NINJ1-204ENST00000489274 IFNW1P05000 195 aa13.74□□□□□ -0.21
NINJ1-204ENST00000489274 FHP07954 510 aa13.74□□□□□ -0.21
NINJ1-204ENST00000489274 CELA2BP08218 269 aaPredicted RBP13.74□□□□□ -0.21
NINJ1-204ENST00000489274 CCDC159P0C7I6 412 aa13.74□□□□□ -0.21
NINJ1-204ENST00000489274 OR12D1P0DN82 309 aa13.74□□□□□ -0.21
NINJ1-204ENST00000489274 NR2F6P10588 404 aa13.74□□□□□ -0.21
NINJ1-204ENST00000489274 ANXA8P13928 327 aa13.74□□□□□ -0.21
NINJ1-204ENST00000489274 IL7RP16871 459 aa13.74□□□□□ -0.21
NINJ1-204ENST00000489274 JUNBP17275 347 aaPredicted RBP13.74□□□□□ -0.21
NINJ1-204ENST00000489274 LIMS1P48059 325 aa13.74□□□□□ -0.21
NINJ1-204ENST00000489274 KHKP50053 298 aa13.74□□□□□ -0.21
NINJ1-204ENST00000489274 CDK5R2Q13319 367 aa13.74□□□□□ -0.21
NINJ1-204ENST00000489274 RAPSNQ13702 412 aa13.74□□□□□ -0.21
NINJ1-204ENST00000489274 SIM2Q14190 667 aaPredicted RBP13.74□□□□□ -0.21
NINJ1-204ENST00000489274 PUM1Q14671 1186 aaKnown RBP eCLIP13.74□□□□□ -0.21
NINJ1-204ENST00000489274 RPS26P11Q5JNZ5 115 aaPredicted RBP13.74□□□□□ -0.21
NINJ1-204ENST00000489274 BROXQ5VW32 411 aa13.74□□□□□ -0.21
NINJ1-204ENST00000489274 KCTD8Q6ZWB6 473 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms