RNA–Protein interactions for RNA: ENST00000479384.1

CLOCK-204, Transcript of clock circadian regulator, humanhuman

TSL 2

Gene CLOCK, Length 426 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-204ENST00000479384 SLC26A1Q9H2B4 701 aa2.68□□□□□ -1.98
CLOCK-204ENST00000479384 NMUR1Q9HB89 426 aa2.68□□□□□ -1.98
CLOCK-204ENST00000479384 KCNMB3Q9NPA1 279 aa2.68□□□□□ -1.98
CLOCK-204ENST00000479384 GDF3Q9NR23 364 aa2.68□□□□□ -1.98
CLOCK-204ENST00000479384 PIGVQ9NUD9 493 aa2.68□□□□□ -1.98
CLOCK-204ENST00000479384 NDUFA13Q9P0J0 144 aa2.68□□□□□ -1.98
CLOCK-204ENST00000479384 THAP10Q9P2Z0 257 aaPredicted RBP2.68□□□□□ -1.98
CLOCK-204ENST00000479384 MOB4Q9Y3A3 225 aa2.68□□□□□ -1.98
CLOCK-204ENST00000479384 STRAPQ9Y3F4 350 aaKnown RBP2.68□□□□□ -1.98
CLOCK-204ENST00000479384 TEX264Q9Y6I9 313 aa2.68□□□□□ -1.98
CLOCK-204ENST00000479384 SPAG9O60271 1321 aaKnown RBP2.68□□□□□ -1.98
CLOCK-204ENST00000479384 DHX29Q7Z478 1369 aaKnown RBP2.67□□□□□ -1.98
CLOCK-204ENST00000479384 YJEFN3A6XGL0 299 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 NEDD8-MDP1E9PL57 170 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 PDHXO00330 501 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 EEF2KO00418 725 aaKnown RBP2.67□□□□□ -1.98
CLOCK-204ENST00000479384 FBP2O00757 339 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 CHEK1O14757 476 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 SNAP91O60641 907 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 BCAS2O75934 225 aaPredicted RBP2.67□□□□□ -1.98
CLOCK-204ENST00000479384 CXCL14O95715 111 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 TXNDC12O95881 172 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 PCP11498 1178 aaKnown RBP2.67□□□□□ -1.98
CLOCK-204ENST00000479384 CAPN2P17655 700 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 MARCKSP29966 332 aaPredicted RBP2.67□□□□□ -1.98
CLOCK-204ENST00000479384 PPP2R1AP30153 589 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 ZFP36L2P47974 494 aaKnown RBP2.67□□□□□ -1.98
CLOCK-204ENST00000479384 PITPNBP48739 271 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 CNN1P51911 297 aaKnown RBP2.67□□□□□ -1.98
CLOCK-204ENST00000479384 HNRNPFP52597 415 aaKnown RBP2.67□□□□□ -1.98
CLOCK-204ENST00000479384 YBEYP58557 167 aaPredicted RBP2.67□□□□□ -1.98
CLOCK-204ENST00000479384 SRP54P61011 504 aaKnown RBP2.67□□□□□ -1.98
CLOCK-204ENST00000479384 RPS27AP62979 156 aaKnown RBP2.67□□□□□ -1.98
CLOCK-204ENST00000479384 SRPXP78539 464 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 CCZ1BP86790 482 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 CCZ1P86791 482 aaPredicted RBP2.67□□□□□ -1.98
CLOCK-204ENST00000479384 MPPE1Q53F39 396 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 C1orf189Q5VU69 101 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 PRAMEF7Q5VXH5 474 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 RTL6Q6ICC9 239 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 GPRIN3Q6ZVF9 776 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 RNF130Q86XS8 419 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 WDR49Q8IV35 697 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 BATF2Q8N1L9 274 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 Q8N377 158 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 CCNYQ8ND76 341 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 ICA1LQ8NDH6 482 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 EXOC6Q8TAG9 804 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 URGCPQ8TCY9 931 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 MIPOL1Q8TD10 442 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 CHPT1Q8WUD6 406 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 C11orf52Q96A22 123 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 SLCO4A1Q96BD0 722 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 MRPL53Q96EL3 112 aaKnown RBP2.67□□□□□ -1.98
CLOCK-204ENST00000479384 RPGRIP1Q96KN7 1286 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 RAB40CQ96S21 281 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 TRPV6Q9H1D0 765 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 ABCG8Q9H221 673 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 CXXC4Q9H2H0 198 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 DPEP3Q9H4B8 488 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 MOB1AQ9H8S9 216 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 PANK3Q9H999 370 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 TECRQ9NZ01 308 aaKnown RBP2.67□□□□□ -1.98
CLOCK-204ENST00000479384 VPS54Q9P1Q0 977 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 IL19Q9UHD0 177 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 NARFQ9UHQ1 456 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 TSPAN16Q9UKR8 245 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 MRPS2Q9Y399 296 aaKnown RBP2.67□□□□□ -1.98
CLOCK-204ENST00000479384 AUP1Q9Y679 476 aa2.67□□□□□ -1.98
CLOCK-204ENST00000479384 FGD5Q6ZNL6 1462 aa2.66□□□□□ -1.98
CLOCK-204ENST00000479384 IGLV4-3A0A075B6K6 122 aa2.66□□□□□ -1.98
CLOCK-204ENST00000479384 TRGV8A0A0C4DH27 118 aa2.66□□□□□ -1.98
CLOCK-204ENST00000479384 LOC390937A0A1W2PQ73 354 aa2.66□□□□□ -1.98
CLOCK-204ENST00000479384 SH3PXD2BA1X283 911 aa2.66□□□□□ -1.98
CLOCK-204ENST00000479384 IGLON5A6NGN9 336 aa2.66□□□□□ -1.98
CLOCK-204ENST00000479384 SLC9B1P1A6NJY1 282 aa2.66□□□□□ -1.98
CLOCK-204ENST00000479384 ARHGEF33A8MVX0 844 aa2.66□□□□□ -1.98
CLOCK-204ENST00000479384 CSDE1O75534 798 aaKnown RBP2.66□□□□□ -1.98
CLOCK-204ENST00000479384 FHP07954 510 aa2.66□□□□□ -1.98
CLOCK-204ENST00000479384 SERPINF2P08697 491 aa2.66□□□□□ -1.98
CLOCK-204ENST00000479384 MBL2P11226 248 aaPredicted RBP2.66□□□□□ -1.98
CLOCK-204ENST00000479384 PTGER3P43115 390 aa2.66□□□□□ -1.98
CLOCK-204ENST00000479384 SLC1A6P48664 564 aa2.66□□□□□ -1.98
CLOCK-204ENST00000479384 RIDAP52758 137 aaKnown RBP2.66□□□□□ -1.98
CLOCK-204ENST00000479384 CASP9P55211 416 aa2.66□□□□□ -1.98
CLOCK-204ENST00000479384 NDUFV3P56181 108 aaKnown RBP2.66□□□□□ -1.98
CLOCK-204ENST00000479384 MS4A2Q01362 244 aa2.66□□□□□ -1.98
CLOCK-204ENST00000479384 WASHC5Q12768 1159 aa2.66□□□□□ -1.98
CLOCK-204ENST00000479384 COX10Q12887 443 aa2.66□□□□□ -1.98
CLOCK-204ENST00000479384 MSLNQ13421 630 aaPredicted RBP2.66□□□□□ -1.98
CLOCK-204ENST00000479384 RAPSNQ13702 412 aa2.66□□□□□ -1.98
CLOCK-204ENST00000479384 FASTKQ14296 549 aaKnown RBP2.66□□□□□ -1.98
CLOCK-204ENST00000479384 P2RY14Q15391 338 aa2.66□□□□□ -1.98
CLOCK-204ENST00000479384 CARTPTQ16568 116 aa2.66□□□□□ -1.98
CLOCK-204ENST00000479384 GPAT3Q53EU6 434 aa2.66□□□□□ -1.98
CLOCK-204ENST00000479384 DCAF12Q5T6F0 453 aa2.66□□□□□ -1.98
CLOCK-204ENST00000479384 DDI2Q5TDH0 399 aa2.66□□□□□ -1.98
CLOCK-204ENST00000479384 NKAIN2Q5VXU1 208 aa2.66□□□□□ -1.98
CLOCK-204ENST00000479384 RAB12Q6IQ22 244 aa2.66□□□□□ -1.98
CLOCK-204ENST00000479384 ZNF343Q6P1L6 599 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms