RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 ANKRD9Q96BM1 317 aaPredicted RBP15.74■□□□□ 0.11
VIM-204ENST00000478746 ZNF597Q96LX8 424 aa15.74■□□□□ 0.11
VIM-204ENST00000478746 DGAT2Q96PD7 388 aa15.74■□□□□ 0.11
VIM-204ENST00000478746 F2RL3Q96RI0 385 aa15.74■□□□□ 0.11
VIM-204ENST00000478746 MAPKAP1Q9BPZ7 522 aa15.74■□□□□ 0.11
VIM-204ENST00000478746 PITHD1Q9GZP4 211 aaPredicted RBP15.74■□□□□ 0.11
VIM-204ENST00000478746 ADAM21Q9UKJ8 722 aa15.74■□□□□ 0.11
VIM-204ENST00000478746 CNOT11Q9UKZ1 510 aaKnown RBP15.74■□□□□ 0.11
VIM-204ENST00000478746 DOCK7Q96N67 2140 aa15.73■□□□□ 0.11
VIM-204ENST00000478746 CDC7O00311 574 aa15.73■□□□□ 0.11
VIM-204ENST00000478746 TRIM3O75382 744 aaPredicted RBP15.73■□□□□ 0.11
VIM-204ENST00000478746 ERN1O75460 977 aaKnown RBP15.73■□□□□ 0.11
VIM-204ENST00000478746 IGKV3-11P04433 115 aa15.73■□□□□ 0.11
VIM-204ENST00000478746 FBXO45P0C2W1 286 aa15.73■□□□□ 0.11
VIM-204ENST00000478746 PGAM1P18669 254 aa15.73■□□□□ 0.11
VIM-204ENST00000478746 CDKL1Q00532 357 aa15.73■□□□□ 0.11
VIM-204ENST00000478746 C18orf21Q32NC0 220 aaPredicted RBP15.73■□□□□ 0.11
VIM-204ENST00000478746 VN1R5Q7Z5H4 357 aa15.73■□□□□ 0.11
VIM-204ENST00000478746 YTHDF3Q7Z739 585 aaKnown RBP15.73■□□□□ 0.11
VIM-204ENST00000478746 OR4N5Q8IXE1 308 aa15.73■□□□□ 0.11
VIM-204ENST00000478746 PPWD1Q96BP3 646 aaKnown RBP15.73■□□□□ 0.11
VIM-204ENST00000478746 RBM18Q96H35 190 aaKnown RBP15.73■□□□□ 0.11
VIM-204ENST00000478746 CAPS2Q9BXY5 557 aa15.73■□□□□ 0.11
VIM-204ENST00000478746 ROGDIQ9GZN7 287 aa15.73■□□□□ 0.11
VIM-204ENST00000478746 NDRG3Q9UGV2 375 aa15.73■□□□□ 0.11
VIM-204ENST00000478746 SLC6A5Q9Y345 797 aa15.73■□□□□ 0.11
VIM-204ENST00000478746 SPACA6W5XKT8 324 aa15.73■□□□□ 0.11
VIM-204ENST00000478746 ANKRD33BA6NCL7 494 aa15.72■□□□□ 0.11
VIM-204ENST00000478746 TMIGD3P0DMS9 266 aaPredicted RBP15.72■□□□□ 0.11
VIM-204ENST00000478746 BMP7P18075 431 aa15.72■□□□□ 0.11
VIM-204ENST00000478746 STT3AP46977 705 aa15.72■□□□□ 0.11
VIM-204ENST00000478746 CPA2P48052 419 aa15.72■□□□□ 0.11
VIM-204ENST00000478746 KCNC1P48547 511 aa15.72■□□□□ 0.11
VIM-204ENST00000478746 CDK9P50750 372 aaKnown RBP15.72■□□□□ 0.11
VIM-204ENST00000478746 TBCELQ5QJ74 424 aa15.72■□□□□ 0.11
VIM-204ENST00000478746 FAM45BPQ6NSW5 357 aa15.72■□□□□ 0.11
VIM-204ENST00000478746 TTC27Q6P3X3 843 aa15.72■□□□□ 0.11
VIM-204ENST00000478746 GALNT7Q86SF2 657 aa15.72■□□□□ 0.11
VIM-204ENST00000478746 LUZP2Q86TE4 346 aa15.72■□□□□ 0.11
VIM-204ENST00000478746 CNTN4Q8IWV2 1026 aa15.72■□□□□ 0.11
VIM-204ENST00000478746 FAM45AQ8TCE6 357 aa15.72■□□□□ 0.11
VIM-204ENST00000478746 DIO2Q92813 273 aa15.72■□□□□ 0.11
VIM-204ENST00000478746 WDYHV1Q96HA8 205 aa15.72■□□□□ 0.11
VIM-204ENST00000478746 ART5Q96L15 291 aa15.72■□□□□ 0.11
VIM-204ENST00000478746 KCNC2Q96PR1 638 aa15.72■□□□□ 0.11
VIM-204ENST00000478746 RYDENQ9NUL5 291 aaKnown RBP15.72■□□□□ 0.11
VIM-204ENST00000478746 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.72■□□□□ 0.112e-33■■□□□ 11.5
VIM-204ENST00000478746 GALNT8Q9NY28 637 aa15.72■□□□□ 0.11
VIM-204ENST00000478746 TRPS1Q9UHF7 1281 aa15.72■□□□□ 0.11
VIM-204ENST00000478746 ZNF490Q9ULM2 529 aaPredicted RBP15.72■□□□□ 0.11
VIM-204ENST00000478746 IQANK1A0A1B0GTG1 560 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 NPEPPSL1A6NEC2 478 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 TRIM64A6NGJ6 449 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 TRIM64BA6NI03 449 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 HRKO00198 91 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 TTC4O95801 387 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 HPNP05981 417 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 CPN2P22792 545 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 ATP5A1P25705 553 aaKnown RBP15.71■□□□□ 0.11
VIM-204ENST00000478746 BIKQ13323 160 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 RCAN2Q14206 197 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 TOMM20Q15388 145 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 NTRK2Q16620 822 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 SPANXN3Q5MJ09 141 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 ADNP2Q6IQ32 1131 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 DGAT2L6Q6ZPD8 337 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 SLC29A4Q7RTT9 530 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 NAT8LQ8N9F0 302 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 ACOT4Q8N9L9 421 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 C9orf106Q8NAJ2 232 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 SRFBP1Q8NEF9 429 aaKnown RBP15.71■□□□□ 0.11
VIM-204ENST00000478746 ANKRD7Q92527 254 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 ABTB1Q969K4 478 aaPredicted RBP15.71■□□□□ 0.11
VIM-204ENST00000478746 MAGOHBQ96A72 148 aaKnown RBP15.71■□□□□ 0.11
VIM-204ENST00000478746 GNRHR2Q96P88 292 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 GAL3ST4Q96RP7 486 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 TBCDQ9BTW9 1192 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 UGT2B28Q9BY64 529 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 PPANQ9NQ55 473 aaKnown RBP15.71■□□□□ 0.11
VIM-204ENST00000478746 SLC17A6Q9P2U8 582 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 CORO1CQ9ULV4 474 aaPredicted RBP15.71■□□□□ 0.11
VIM-204ENST00000478746 OARD1Q9Y530 152 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 IKBKGQ9Y6K9 419 aa15.71■□□□□ 0.11
VIM-204ENST00000478746 TP53I11O14683 189 aa15.7■□□□□ 0.1
VIM-204ENST00000478746 CLGNO14967 610 aa15.7■□□□□ 0.1
VIM-204ENST00000478746 FGF17O60258 216 aa15.7■□□□□ 0.1
VIM-204ENST00000478746 CXCR5P32302 372 aa15.7■□□□□ 0.1
VIM-204ENST00000478746 SLC6A12P48065 614 aa15.7■□□□□ 0.1
VIM-204ENST00000478746 IGLV3-21P80748 117 aaPredicted RBP15.7■□□□□ 0.1
VIM-204ENST00000478746 NHSL2Q5HYW2 709 aa15.7■□□□□ 0.1
VIM-204ENST00000478746 TEDDM1Q5T9Z0 273 aa15.7■□□□□ 0.1
VIM-204ENST00000478746 ZNF793Q6ZN11 406 aa15.7■□□□□ 0.1
VIM-204ENST00000478746 UBE3DQ7Z6J8 389 aa15.7■□□□□ 0.1
VIM-204ENST00000478746 PACS2Q86VP3 889 aa15.7■□□□□ 0.1
VIM-204ENST00000478746 NKAPQ8N5F7 415 aaKnown RBP15.7■□□□□ 0.1
VIM-204ENST00000478746 ZPLD1Q8TCW7 415 aa15.7■□□□□ 0.1
VIM-204ENST00000478746 DOK4Q8TEW6 326 aa15.7■□□□□ 0.1
VIM-204ENST00000478746 RHBDF1Q96CC6 855 aa15.7■□□□□ 0.1
VIM-204ENST00000478746 PERPQ96FX8 193 aa15.7■□□□□ 0.1
VIM-204ENST00000478746 FBXL20Q96IG2 436 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms