RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 WDPCPO95876 746 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 PEX11BO96011 259 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 GSTA1P08263 222 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 PNMTP11086 282 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 ITGAMP11215 1152 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 AOC1P19801 751 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 PRKCHP24723 683 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 STX2P32856 288 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 GRIA1P42261 906 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 MMP13P45452 471 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 RAB13P51153 203 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 CCR8P51685 355 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 WNT3P56703 355 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 SESN2P58004 480 aaPredicted RBP5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 IRF9Q00978 393 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 MALLQ13021 153 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 PSG3Q16557 428 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 MAN2A1Q16706 1144 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 GALNTL6Q49A17 601 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 ATP13A5Q4VNC0 1218 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 ACER2Q5QJU3 275 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 TMEM201Q5SNT2 666 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 CPZQ66K79 652 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 TIGD3Q6B0B8 471 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 CDPF1Q6NVV7 123 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 ESRP1Q6NXG1 681 aaKnown RBP5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 TMEM220Q6QAJ8 160 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 LRRN1Q6UXK5 716 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 SYT9Q86SS6 491 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 ZNF280BQ86YH2 543 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 ARHGAP24Q8N264 748 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 PQLC3Q8N755 202 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 OR10A7Q8NGE5 316 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 OR52N2Q8NGI0 321 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 TBC1D16Q8TBP0 767 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 ACTRT1Q8TDG2 376 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 NEK7Q8TDX7 302 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 SEMA4DQ92854 862 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 SIGLEC11Q96RL6 698 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 FICDQ9BVA6 458 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 KIFC1Q9BW19 673 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 ATXN3LQ9H3M9 355 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 WDR55Q9H6Y2 383 aaPredicted RBP5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 C10orf88Q9H8K7 445 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 ACTR8Q9H981 624 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 CATSPERZQ9NTU4 200 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 NLGN3Q9NZ94 848 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 STOX2Q9P2F5 926 aaPredicted RBP5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 SCOCQ9UIL1 159 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 ACSL5Q9ULC5 683 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 ZFR2Q9UPR6 939 aaKnown RBP5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 RASD1Q9Y272 281 aa5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 EDC4Q6P2E9 1401 aaKnown RBP5.78□□□□□ -1.48
SMARCE1-208ENST00000474246 FAM172BPA6NC97 362 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 FAM90A18PA6NE21 464 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 FAM90A16PA6NEW6 464 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 FAM90A9PA6NNJ1 464 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 SERPINE3A8MV23 424 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 FAM90A5PA8MXJ8 464 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 E9PAM4 449 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 SSX4O60224 188 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 LDOC1O95751 146 aaPredicted RBP5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 FAM90A15PP0C7V4 464 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 FAM90A14PP0C7W9 464 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 ADRB3P13945 408 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 ZNF18P17022 549 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 CTPS1P17812 591 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 GSTM3P21266 225 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 OTX1P32242 354 aaPredicted RBP5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 PTGER4P35408 488 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 PXNP49023 591 aaPredicted RBP5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 PNLIPRP2P54317 469 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 POU6F2P78424 691 aaPredicted RBP5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 HSF2Q03933 536 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 TLE1Q04724 770 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 MZT1Q08AG7 82 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 NAB2Q15742 525 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 CHI3L2Q15782 390 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 PTCHD3Q3KNS1 767 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 ZNF766Q5HY98 468 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 PRAMEF19Q5SWL8 479 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 SCARA3Q6AZY7 606 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 ZSCAN25Q6NSZ9 544 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 GAREM2Q75VX8 874 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 HDDC2Q7Z4H3 204 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 GRASPQ7Z6J2 395 aaPredicted RBP5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 DHFR2Q86XF0 187 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 PHYKPLQ8IUZ5 450 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 ZNF276Q8N554 614 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 ZNF561Q8N587 486 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 OR13H1Q8NG92 308 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 SOCS4Q8WXH5 440 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 FBXW5Q969U6 566 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 DGCR14Q96DF8 476 aaKnown RBP5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 GLT1D1Q96MS3 346 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 MCMBPQ9BTE3 642 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 TMEM43Q9BTV4 400 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 SLC38A1Q9H2H9 487 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 HIPK2Q9H2X6 1198 aa5.77□□□□□ -1.49
SMARCE1-208ENST00000474246 ADAMTS10Q9H324 1103 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms