RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 PCDH1Q08174 1060 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 SERTAD2Q14140 314 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 PRR31Q5SQ13 230 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 VWA1Q6PCB0 445 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 ZNF474Q6S9Z5 364 aaPredicted RBP9.28□□□□□ -0.92
CDHR3-209ENST00000472116 LCTLQ6UWM7 567 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 UBE2R2Q712K3 238 aaPredicted RBP9.28□□□□□ -0.92
CDHR3-209ENST00000472116 STRA8Q7Z7C7 330 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 PLD6Q8N2A8 252 aaKnown RBP9.28□□□□□ -0.92
CDHR3-209ENST00000472116 ZNF321PQ8N8H1 164 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 FAM47BQ8NA70 645 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 C7orf57Q8NEG2 295 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 TRPV3Q8NET8 790 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 PTPMT1Q8WUK0 201 aaPredicted RBP9.28□□□□□ -0.92
CDHR3-209ENST00000472116 ZFAND2BQ8WV99 257 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 STARD4Q96DR4 205 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 C1orf159Q96HA4 380 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 ADAD1Q96M93 576 aaKnown RBP9.28□□□□□ -0.92
CDHR3-209ENST00000472116 RILPQ96NA2 401 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 GNRHR2Q96P88 292 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 GAL3ST4Q96RP7 486 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 TACO1Q9BSH4 297 aaKnown RBP9.28□□□□□ -0.92
CDHR3-209ENST00000472116 TMEM204Q9BSN7 226 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 NTMT1Q9BV86 223 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 NPLQ9BXD5 320 aaPredicted RBP9.28□□□□□ -0.92
CDHR3-209ENST00000472116 ALOXE3Q9BYJ1 711 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 UBQLN3Q9H347 655 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 FAIMQ9NVQ4 179 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 ANO10Q9NW15 660 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 CLCF1Q9UBD9 225 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 VTI1BQ9UEU0 232 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 GDF2Q9UK05 429 aaPredicted RBP9.28□□□□□ -0.92
CDHR3-209ENST00000472116 SH2B3Q9UQQ2 575 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 TCAF1Q9Y4C2 921 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 RNF115Q9Y4L5 304 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 CADP27708 2225 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 LOC100289279A0A1B0GTE1 492 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 ERI2A8K979 691 aaKnown RBP9.27□□□□□ -0.93
CDHR3-209ENST00000472116 TGFBR3LH3BV60 316 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 B3GALT2O43825 422 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 NDUFS7O75251 213 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 CDH16O75309 829 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 FTCDO95954 541 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 FBXO45P0C2W1 286 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 MPC1LP0DKB6 136 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 ENO3P13929 434 aaPredicted RBP9.27□□□□□ -0.93
CDHR3-209ENST00000472116 SLC6A12P48065 614 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 STXBP1P61764 594 aaKnown RBP9.27□□□□□ -0.93
CDHR3-209ENST00000472116 NAE1Q13564 534 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 EFTUD2Q15029 972 aaKnown RBP eCLIP9.27□□□□□ -0.93
CDHR3-209ENST00000472116 EXOC3L2Q2M3D2 409 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 TOR1AIP1Q5JTV8 583 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 MRNIPQ6NTE8 343 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 ADAM5Q6NVV9 412 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 SLC29A4Q7RTT9 530 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 YRDCQ86U90 279 aaKnown RBP9.27□□□□□ -0.93
CDHR3-209ENST00000472116 PALM2Q8IXS6 379 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 KATNAL2Q8IYT4 538 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 TAGAPQ8N103 731 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 PRELID2Q8N945 189 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 FAM83FQ8NEG4 500 aaPredicted RBP9.27□□□□□ -0.93
CDHR3-209ENST00000472116 OR14L1PQ8NHC6 308 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 ASB11Q8WXH4 323 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 TP53INP1Q96A56 240 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 DTNBP1Q96EV8 351 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 ZNF778Q96MU6 729 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 FETUBQ9UGM5 382 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 AMFRQ9UKV5 643 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 PROCRQ9UNN8 238 aa9.27□□□□□ -0.93
CDHR3-209ENST00000472116 A0A096LNT2 108 aa9.26□□□□□ -0.93
CDHR3-209ENST00000472116 ELOA3DA6NLF2 546 aaPredicted RBP9.26□□□□□ -0.93
CDHR3-209ENST00000472116 E7EVH7 732 aa9.26□□□□□ -0.93
CDHR3-209ENST00000472116 GNB5O14775 395 aa9.26□□□□□ -0.93
CDHR3-209ENST00000472116 CTNSO60931 367 aa9.26□□□□□ -0.93
CDHR3-209ENST00000472116 METTL18O95568 372 aa9.26□□□□□ -0.93
CDHR3-209ENST00000472116 ALDOAP04075 364 aaKnown RBP9.26□□□□□ -0.93
CDHR3-209ENST00000472116 PTMAP06454 111 aaKnown RBP9.26□□□□□ -0.93
CDHR3-209ENST00000472116 THBDP07204 575 aa9.26□□□□□ -0.93
CDHR3-209ENST00000472116 CD3EP07766 207 aa9.26□□□□□ -0.93
CDHR3-209ENST00000472116 DANCRP0C864 163 aa9.26□□□□□ -0.93
CDHR3-209ENST00000472116 USF1P22415 310 aaPredicted RBP9.26□□□□□ -0.93
CDHR3-209ENST00000472116 SCTRP47872 440 aa9.26□□□□□ -0.93
CDHR3-209ENST00000472116 COMPP49747 757 aaPredicted RBP9.26□□□□□ -0.93
CDHR3-209ENST00000472116 TMED10P49755 219 aaKnown RBP9.26□□□□□ -0.93
CDHR3-209ENST00000472116 CSHL1Q14406 222 aa9.26□□□□□ -0.93
CDHR3-209ENST00000472116 RPS6KA2Q15349 733 aa9.26□□□□□ -0.93
CDHR3-209ENST00000472116 SLC18A3Q16572 532 aa9.26□□□□□ -0.93
CDHR3-209ENST00000472116 NTRK2Q16620 822 aa9.26□□□□□ -0.93
CDHR3-209ENST00000472116 ELOA3BQ3SY89 546 aa9.26□□□□□ -0.93
CDHR3-209ENST00000472116 ALKBH2Q6NS38 261 aa9.26□□□□□ -0.93
CDHR3-209ENST00000472116 AAGABQ6PD74 315 aa9.26□□□□□ -0.93
CDHR3-209ENST00000472116 AGTRAPQ6RW13 159 aa9.26□□□□□ -0.93
CDHR3-209ENST00000472116 SASS6Q6UVJ0 657 aa9.26□□□□□ -0.93
CDHR3-209ENST00000472116 SEZ6L2Q6UXD5 910 aa9.26□□□□□ -0.93
CDHR3-209ENST00000472116 ADGRE4PQ86SQ3 457 aa9.26□□□□□ -0.93
CDHR3-209ENST00000472116 KIAA1328Q86T90 577 aa9.26□□□□□ -0.93
CDHR3-209ENST00000472116 IFNEQ86WN2 208 aa9.26□□□□□ -0.93
CDHR3-209ENST00000472116 ABHD11Q8NFV4 315 aa9.26□□□□□ -0.93
CDHR3-209ENST00000472116 ELOA3Q8NG57 546 aa9.26□□□□□ -0.93
CDHR3-209ENST00000472116 OR10H5Q8NGA6 315 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms