RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 HCFC2Q9Y5Z7 792 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 CAPN5O15484 640 aaPredicted RBP12.95□□□□□ -0.34
BRCA1-209ENST00000470026 C6P13671 934 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 POU1F1P28069 291 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 TNFSF8P32971 234 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 MAPK12P53778 367 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 HEPACAMQ14CZ8 416 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 SPHARQ15513 63 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 DEFB115Q30KQ5 88 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 DENND4AQ7Z401 1863 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 C6orf120Q7Z4R8 191 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 WDR53Q7Z5U6 358 aaPredicted RBP12.95□□□□□ -0.34
BRCA1-209ENST00000470026 KRT73Q86Y46 540 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 DCUN1D3Q8IWE4 304 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 PROKR2Q8NFJ6 384 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 SETD6Q8TBK2 473 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 ZNF296Q8WUU4 475 aaPredicted RBP12.95□□□□□ -0.34
BRCA1-209ENST00000470026 RASSF5Q8WWW0 418 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 SMPDL3AQ92484 453 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 ZSWIM3Q96MP5 696 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 IL4I1Q96RQ9 567 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 ASPNQ9BXN1 380 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 BARHL1Q9BZE3 327 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 ROGDIQ9GZN7 287 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 C11orf16Q9NQ32 467 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 ACSS1Q9NUB1 689 aaPredicted RBP12.95□□□□□ -0.34
BRCA1-209ENST00000470026 NDUFB11Q9NX14 153 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 POU2F3Q9UKI9 436 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 PCYT1BQ9Y5K3 369 aaPredicted RBP12.95□□□□□ -0.34
BRCA1-209ENST00000470026 MUC22E2RYF6 1773 aaPredicted RBP12.95□□□□□ -0.34
BRCA1-209ENST00000470026 HEPACAM2A8MVW5 462 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 H3BQ06 376 aaPredicted RBP12.95□□□□□ -0.34
BRCA1-209ENST00000470026 SLC9A3R1O14745 358 aaPredicted RBP12.95□□□□□ -0.34
BRCA1-209ENST00000470026 ASNA1O43681 348 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 RPS19P39019 145 aaKnown RBP12.95□□□□□ -0.34
BRCA1-209ENST00000470026 XKP51811 444 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 MANFP55145 182 aaKnown RBP12.95□□□□□ -0.34
BRCA1-209ENST00000470026 SMIM11AP58511 58 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 REEP5Q00765 189 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 ZNF91Q05481 1191 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 TMEM52BQ4KMG9 183 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 FAM180BQ6P0A1 224 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 FAM26EQ8N5C1 309 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 ST13P5Q8NFI4 369 aaPredicted RBP12.95□□□□□ -0.34
BRCA1-209ENST00000470026 OR5AR1Q8NGP9 310 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 MENTQ9BUN1 341 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 MND1Q9BWT6 205 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 PITHD1Q9GZP4 211 aaPredicted RBP12.95□□□□□ -0.34
BRCA1-209ENST00000470026 ABCG4Q9H172 646 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 SERHL2Q9H4I8 314 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 TMEM39AQ9NV64 488 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 TAS2R7Q9NYW3 318 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 CLEC2DQ9UHP7 191 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 ADAM29Q9UKF5 820 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 TBC1D24Q9ULP9 559 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 A4GNTQ9UNA3 340 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 ASF1AQ9Y294 204 aa12.95□□□□□ -0.34
BRCA1-209ENST00000470026 COL4A3Q01955 1670 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 PRAMEF27A3QJZ7 478 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 ANKDD1BA6NHY2 528 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 PDZK1P1A8MUH7 402 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 ZNF670-ZNF695F2Z2N8 137 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 HOXC11O43248 304 aaPredicted RBP12.94□□□□□ -0.34
BRCA1-209ENST00000470026 CYP17A1P05093 508 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 IGFBP1P08833 259 aaPredicted RBP12.94□□□□□ -0.34
BRCA1-209ENST00000470026 HBQ1P09105 142 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 GSTT2P0CG29 244 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 GSTT2BP0CG30 244 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 EFNB1P98172 346 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 MLLT11Q13015 90 aaPredicted RBP12.94□□□□□ -0.34
BRCA1-209ENST00000470026 TP53BP2Q13625 1128 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 C9orf64Q5T6V5 341 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 C17orf64Q86WR6 236 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 TRIM69Q86WT6 500 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 TBC1D19Q8N5T2 526 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 ASB15Q8WXK1 588 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 COX14Q96I36 57 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 QRFPRQ96P65 431 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 OR2A14Q96R47 310 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 F2RL3Q96RI0 385 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 AIF1LQ9BQI0 150 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 WFDC6Q9BQY6 131 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 MOV10Q9HCE1 1003 aaKnown RBP12.94□□□□□ -0.34
BRCA1-209ENST00000470026 DNAJC27Q9NZQ0 273 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 STUB1Q9UNE7 303 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 SNX11Q9Y5W9 270 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 V9GYH0 126 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 PRRC2BQ5JSZ5 2229 aaKnown RBP12.94□□□□□ -0.34
BRCA1-209ENST00000470026 A0A1W2PRQ8 180 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 HYKKA2RU49 373 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 HIDE1A8MVS5 230 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 ANHXE9PGG2 379 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 RTCAO00442 366 aaKnown RBP12.94□□□□□ -0.34
BRCA1-209ENST00000470026 OR10H3O60404 316 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 TPST2O60704 377 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 UGT2B17O75795 530 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 APOA1P02647 267 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 CXCR2P25025 360 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 WEE1P30291 646 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 HSD17B2P37059 387 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms