RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 OR4N5Q8IXE1 308 aa18.51■□□□□ 0.55
COL9A3-204ENST00000463487 LRRC34Q8IZ02 419 aa18.51■□□□□ 0.55
COL9A3-204ENST00000463487 SLC5A8Q8N695 610 aa18.51■□□□□ 0.55
COL9A3-204ENST00000463487 MORN4Q8NDC4 146 aa18.51■□□□□ 0.55
COL9A3-204ENST00000463487 PIWIL2Q8TC59 973 aaKnown RBP18.51■□□□□ 0.55
COL9A3-204ENST00000463487 FCRL1Q96LA6 429 aa18.51■□□□□ 0.55
COL9A3-204ENST00000463487 MAGEB18Q96M61 343 aa18.51■□□□□ 0.55
COL9A3-204ENST00000463487 C7orf26Q96N11 449 aa18.51■□□□□ 0.55
COL9A3-204ENST00000463487 NUF2Q9BZD4 464 aa18.51■□□□□ 0.55
COL9A3-204ENST00000463487 EPS8L2Q9H6S3 715 aa18.51■□□□□ 0.55
COL9A3-204ENST00000463487 KCNK13Q9HB14 408 aa18.51■□□□□ 0.55
COL9A3-204ENST00000463487 PNPOQ9NVS9 261 aa18.51■□□□□ 0.55
COL9A3-204ENST00000463487 C5AR2Q9P296 337 aa18.51■□□□□ 0.55
COL9A3-204ENST00000463487 UTS2RQ9UKP6 389 aa18.51■□□□□ 0.55
COL9A3-204ENST00000463487 ENTPD4Q9Y227 616 aa18.51■□□□□ 0.55
COL9A3-204ENST00000463487 EIF3LQ9Y262 564 aaKnown RBP18.51■□□□□ 0.55
COL9A3-204ENST00000463487 KMT2BQ9UMN6 2715 aaPredicted RBP18.5■□□□□ 0.55
COL9A3-204ENST00000463487 EIF4E1BA6NMX2 242 aaKnown RBP18.5■□□□□ 0.55
COL9A3-204ENST00000463487 C17orf105B2RV13 164 aa18.5■□□□□ 0.55
COL9A3-204ENST00000463487 TGFBR3LH3BV60 316 aa18.5■□□□□ 0.55
COL9A3-204ENST00000463487 ERAL1O75616 437 aaKnown RBP18.5■□□□□ 0.55
COL9A3-204ENST00000463487 PRPS2P11908 318 aa18.5■□□□□ 0.55
COL9A3-204ENST00000463487 PORP16435 677 aaPredicted RBP18.5■□□□□ 0.55
COL9A3-204ENST00000463487 CSNK2A2P19784 350 aaPredicted RBP18.5■□□□□ 0.55
COL9A3-204ENST00000463487 DDCP20711 480 aa18.5■□□□□ 0.55
COL9A3-204ENST00000463487 CLCN2P51788 898 aa18.5■□□□□ 0.55
COL9A3-204ENST00000463487 XKP51811 444 aa18.5■□□□□ 0.55
COL9A3-204ENST00000463487 Q0VFX4 171 aa18.5■□□□□ 0.55
COL9A3-204ENST00000463487 RAPSNQ13702 412 aa18.5■□□□□ 0.55
COL9A3-204ENST00000463487 RFTN2Q52LD8 501 aaPredicted RBP18.5■□□□□ 0.55
COL9A3-204ENST00000463487 WDR75Q8IWA0 830 aaKnown RBP18.5■□□□□ 0.55
COL9A3-204ENST00000463487 FAM9CQ8IZT9 166 aa18.5■□□□□ 0.55
COL9A3-204ENST00000463487 VMP1Q96GC9 406 aa18.5■□□□□ 0.55
COL9A3-204ENST00000463487 SMAD5Q99717 465 aaKnown RBP18.5■□□□□ 0.55
COL9A3-204ENST00000463487 SLC25A18Q9H1K4 315 aa18.5■□□□□ 0.55
COL9A3-204ENST00000463487 MEAF6Q9HAF1 191 aa18.5■□□□□ 0.55
COL9A3-204ENST00000463487 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.5■□□□□ 0.554e-7■■□□□ 12.2
COL9A3-204ENST00000463487 NOP53Q9NZM5 478 aaKnown RBP18.5■□□□□ 0.55
COL9A3-204ENST00000463487 ABI3Q9P2A4 366 aa18.5■□□□□ 0.55
COL9A3-204ENST00000463487 MARCOQ9UEW3 520 aaPredicted RBP18.5■□□□□ 0.55
COL9A3-204ENST00000463487 CLDN16Q9Y5I7 305 aa18.5■□□□□ 0.55
COL9A3-204ENST00000463487 PCSK5Q92824 1860 aa18.5■□□□□ 0.55
COL9A3-204ENST00000463487 MASP2O00187 686 aa18.49■□□□□ 0.55
COL9A3-204ENST00000463487 KITP10721 976 aa18.49■□□□□ 0.55
COL9A3-204ENST00000463487 PCSK2P16519 638 aa18.49■□□□□ 0.55
COL9A3-204ENST00000463487 SDC1P18827 310 aa18.49■□□□□ 0.55
COL9A3-204ENST00000463487 RPL3P39023 403 aaKnown RBP18.49■□□□□ 0.55
COL9A3-204ENST00000463487 C6orf136Q5SQH8 315 aa18.49■□□□□ 0.55
COL9A3-204ENST00000463487 ISLR2Q6UXK2 745 aa18.49■□□□□ 0.55
COL9A3-204ENST00000463487 BRIX1Q8TDN6 353 aaKnown RBP18.49■□□□□ 0.55
COL9A3-204ENST00000463487 CKAP2Q8WWK9 683 aa18.49■□□□□ 0.55
COL9A3-204ENST00000463487 RIT1Q92963 219 aa18.49■□□□□ 0.55
COL9A3-204ENST00000463487 PPP1R36Q96LQ0 422 aa18.49■□□□□ 0.55
COL9A3-204ENST00000463487 C3orf30Q96M34 536 aa18.49■□□□□ 0.55
COL9A3-204ENST00000463487 NUDT9Q9BW91 350 aa18.49■□□□□ 0.55
COL9A3-204ENST00000463487 PPIEQ9UNP9 301 aaKnown RBP18.49■□□□□ 0.55
COL9A3-204ENST00000463487 MAPRE3Q9UPY8 281 aa18.49■□□□□ 0.55
COL9A3-204ENST00000463487 TP53TG5Q9Y2B4 290 aa18.49■□□□□ 0.55
COL9A3-204ENST00000463487 LOC400499M0QZD8 3231 aa18.48■□□□□ 0.55
COL9A3-204ENST00000463487 ITGAMP11215 1152 aa18.48■□□□□ 0.55
COL9A3-204ENST00000463487 BCKDHAP12694 445 aa18.48■□□□□ 0.55
COL9A3-204ENST00000463487 CPMP14384 443 aa18.48■□□□□ 0.55
COL9A3-204ENST00000463487 HPCAL1P37235 193 aa18.48■□□□□ 0.55
COL9A3-204ENST00000463487 ERVK-8P63133 956 aa18.48■□□□□ 0.55
COL9A3-204ENST00000463487 EMX2Q04743 252 aa18.48■□□□□ 0.55
COL9A3-204ENST00000463487 LY6DQ14210 128 aa18.48■□□□□ 0.55
COL9A3-204ENST00000463487 SPRED3Q2MJR0 410 aa18.48■□□□□ 0.55
COL9A3-204ENST00000463487 ABHD17BQ5VST6 288 aa18.48■□□□□ 0.55
COL9A3-204ENST00000463487 FAM71E1Q6IPT2 247 aa18.48■□□□□ 0.55
COL9A3-204ENST00000463487 ASB18Q6ZVZ8 466 aa18.48■□□□□ 0.55
COL9A3-204ENST00000463487 R3HCC1LQ7Z5L2 792 aaKnown RBP18.48■□□□□ 0.55
COL9A3-204ENST00000463487 LRRC25Q8N386 305 aaPredicted RBP18.48■□□□□ 0.55
COL9A3-204ENST00000463487 EXD3Q8N9H8 876 aa18.48■□□□□ 0.55
COL9A3-204ENST00000463487 NFAM1Q8NET5 270 aaPredicted RBP18.48■□□□□ 0.55
COL9A3-204ENST00000463487 PTPMT1Q8WUK0 201 aaPredicted RBP18.48■□□□□ 0.55
COL9A3-204ENST00000463487 ZNF354BQ96LW1 612 aa18.48■□□□□ 0.55
COL9A3-204ENST00000463487 DEFB126Q9BYW3 111 aa18.48■□□□□ 0.55
COL9A3-204ENST00000463487 ZNF552Q9H707 407 aaPredicted RBP18.48■□□□□ 0.55
COL9A3-204ENST00000463487 PTGFRNQ9P2B2 879 aa18.48■□□□□ 0.55
COL9A3-204ENST00000463487 CES1P1Q9UKY3 287 aa18.48■□□□□ 0.55
COL9A3-204ENST00000463487 MED13Q9UHV7 2174 aa18.48■□□□□ 0.55
COL9A3-204ENST00000463487 MGAQ8IWI9 3026 aa18.47■□□□□ 0.55
COL9A3-204ENST00000463487 MYOCOSA0A1B0GUC4 107 aa18.47■□□□□ 0.55
COL9A3-204ENST00000463487 A8MUI8 341 aa18.47■□□□□ 0.55
COL9A3-204ENST00000463487 DPM1O60762 260 aa18.47■□□□□ 0.55
COL9A3-204ENST00000463487 JUNP05412 331 aaKnown RBP18.47■□□□□ 0.55
COL9A3-204ENST00000463487 LBPP18428 481 aa18.47■□□□□ 0.55
COL9A3-204ENST00000463487 NT5EP21589 574 aa18.47■□□□□ 0.55
COL9A3-204ENST00000463487 NTSP30990 170 aa18.47■□□□□ 0.55
COL9A3-204ENST00000463487 MPIP34949 423 aa18.47■□□□□ 0.55
COL9A3-204ENST00000463487 IL23RQ5VWK5 629 aa18.47■□□□□ 0.55
COL9A3-204ENST00000463487 RGS9BPQ6ZS82 235 aa18.47■□□□□ 0.55
COL9A3-204ENST00000463487 GALNT12Q8IXK2 581 aa18.47■□□□□ 0.55
COL9A3-204ENST00000463487 MMP21Q8N119 569 aa18.47■□□□□ 0.55
COL9A3-204ENST00000463487 LGI4Q8N135 537 aa18.47■□□□□ 0.55
COL9A3-204ENST00000463487 LIX1Q8N485 282 aa18.47■□□□□ 0.55
COL9A3-204ENST00000463487 OR1N1Q8NGS0 311 aa18.47■□□□□ 0.55
COL9A3-204ENST00000463487 SLC2A12Q8TD20 617 aa18.47■□□□□ 0.55
COL9A3-204ENST00000463487 ELP5Q8TE02 316 aa18.47■□□□□ 0.55
COL9A3-204ENST00000463487 SLC39A7Q92504 469 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms